Literature DB >> 32128960

BK polyomavirus diversity-Why viral variation matters.

Jason T Blackard1, Stella M Davies2, Benjamin L Laskin3.   

Abstract

BK polyomavirus (BKPyV or BKV) is a non-enveloped, circular double-stranded DNA virus that may exceed 80% seroprevalence in adults. BKV infection typically occurs during childhood, and the majority of adults are latently infected. While BKV infection is rarely associated with clinical disease in most individuals, in immunosuppressed individuals, reactivation may cause kidney (BK-associated nephropathy) or bladder (hemorrhagic cystitis and ureteral stenosis) injury. No antiviral therapies have been approved for the treatment of BKV infection. Reducing immunosuppression is the most effective therapy, although this is not feasible in many patients. Thus, a robust understanding of viral pathogenesis and viral diversity remains important for the development of future therapeutic strategies. Studies of BKV diversity are quite sparse compared to other common viral infections; thus, much of our understanding of BVK variability and evolution relies heavily analogous studies of other viruses such as HIV or viral hepatitis. We provide a comprehensive review of BKV diversity at the population and individual level with careful consideration of how viral variability may impact viral replication, pathogenesis, tropism, and protein function. We also discuss a number of outstanding questions related to BK virus diversity that should be explored rigorously in future studies.
© 2020 John Wiley & Sons, Ltd.

Entities:  

Keywords:  BK polyomavirus; BK virus; diversity; evolution; variation

Year:  2020        PMID: 32128960      PMCID: PMC7363569          DOI: 10.1002/rmv.2102

Source DB:  PubMed          Journal:  Rev Med Virol        ISSN: 1052-9276            Impact factor:   6.989


  117 in total

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Authors:  Eva Ramírez de Arellano; Cristina Martín; Vincent Soriano; José Alcamí; Africa Holguín
Journal:  Virus Genes       Date:  2006-12-09       Impact factor: 2.332

2.  Phosphorylation of Ser-80 of VP1 and Ser-254 of VP2 is essential for human BK virus propagation in tissue culture.

Authors:  Pei-Lain Chen; Pang-Hung Hsu; Chiung-Yao Fang; Chi-Fang Chang; Wei-Chih Ou; Meilin Wang; Deching Chang
Journal:  J Gen Virol       Date:  2011-07-13       Impact factor: 3.891

Review 3.  Hepatitis B virus: significance of genotypes.

Authors:  S Schaefer
Journal:  J Viral Hepat       Date:  2005-03       Impact factor: 3.728

4.  Tracking hepatitis C virus quasispecies major and minor variants in symptomatic and asymptomatic liver transplant recipients.

Authors:  D R Gretch; S J Polyak; J J Wilson; R L Carithers; J D Perkins; L Corey
Journal:  J Virol       Date:  1996-11       Impact factor: 5.103

5.  Specific sequence configurations of HIV-1 LTR G/C box array result in altered recruitment of Sp isoforms and correlate with disease progression.

Authors:  Michael R Nonnemacher; Bryan P Irish; Yujie Liu; David Mauger; Brian Wigdahl
Journal:  J Neuroimmunol       Date:  2004-12       Impact factor: 3.478

6.  BK polyomavirus subtype III in a pediatric renal transplant patient with nephropathy.

Authors:  Beatrix Kapusinszky; Sharon F Chen; Malaya K Sahoo; Martina I Lefterova; Lynn Kjelson; Paul C Grimm; Neeraja Kambham; Waldo Concepcion; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2013-09-18       Impact factor: 5.948

7.  BK polyomavirus genotyping at inter- and intra-patient level in Spain.

Authors:  J Ledesma; E Bouza; M A González-Nicolás; D García de Viedma; B Rodríguez-Sánchez; P Muñoz
Journal:  J Med Virol       Date:  2013-08       Impact factor: 2.327

8.  BK virus characterisation among HIV-1-Infected individuals and its association with immunosuppression.

Authors:  Subha Jagannath; Jaiprasath Sachithanandham; Veena V Ramalingam; John Paul Demosthenes; Asha M Abraham; Anand Zachariah; George M Varghese; Rajesh Kannangai
Journal:  Indian J Med Microbiol       Date:  2018 Apr-Jun       Impact factor: 0.985

9.  The NS3 helicase and NS5B-to-3'X regions are important for efficient hepatitis C virus strain JFH-1 replication in Huh7 cells.

Authors:  Asako Murayama; Tomoko Date; Kenichi Morikawa; Daisuke Akazawa; Michiko Miyamoto; Minako Kaga; Koji Ishii; Tetsuro Suzuki; Takanobu Kato; Masashi Mizokami; Takaji Wakita
Journal:  J Virol       Date:  2007-05-23       Impact factor: 5.103

10.  An unusually high substitution rate in transplant-associated BK polyomavirus in vivo is further concentrated in HLA-C-bound viral peptides.

Authors:  Pilar Domingo-Calap; Benjamin Schubert; Mélanie Joly; Morgane Solis; Meiggie Untrau; Raphael Carapito; Philippe Georgel; Sophie Caillard; Samira Fafi-Kremer; Nicodème Paul; Oliver Kohlbacher; Fernando González-Candelas; Seiamak Bahram
Journal:  PLoS Pathog       Date:  2018-10-18       Impact factor: 6.823

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  6 in total

1.  Optimized amplification of BK polyomavirus in urine.

Authors:  Elizabeth A Odegard; Heidi L Meeds; Steven B Kleiboeker; Assem Ziady; Anthony Sabulski; Sonata Jodele; Alix E Seif; Stella M Davies; Benjamin L Laskin; Jason T Blackard
Journal:  J Virol Methods       Date:  2021-10-07       Impact factor: 2.014

2.  BK Polyomavirus Subtypes II and IV in Hematopoietic Cell Transplant Recipients.

Authors:  Elizabeth A Odegard; Heidi L Meeds; Steven B Kleiboeker; Assem Ziady; Anthony Sabulski; Sonata Jodele; Alix E Seif; Stella M Davies; Benjamin L Laskin; Jason T Blackard
Journal:  Microbiol Resour Announc       Date:  2022-01-06

3.  Translating genomic exploration of the family Polyomaviridae into confident human polyomavirus detection.

Authors:  Sergio Kamminga; Igor A Sidorov; Michaël Tadesse; Els van der Meijden; Caroline de Brouwer; Hans L Zaaijer; Mariet C W Feltkamp; Alexander E Gorbalenya
Journal:  iScience       Date:  2021-12-11

4.  Coinfection of disseminated cryptococcosis and BK Virus, a casualty of missed diagnosis during the COVID-19 Pandemic: A case report and review of the literature.

Authors:  Jéssica Louise Benelli; Rossana Patrícia Basso; Márcia de Lima Rodrigues; Vanice Rodrigues Poester; Lívia Silveira Munhoz; Valerio Rodrigues Aquino; David A Stevens; Melissa Orzechowski Xavier
Journal:  Curr Med Mycol       Date:  2021-09

5.  Human genes with relative synonymous codon usage analogous to that of polyomaviruses are involved in the mechanism of polyomavirus nephropathy.

Authors:  Yu Fan; Duan Guo; Shangping Zhao; Qiang Wei; Yi Li; Tao Lin
Journal:  Front Cell Infect Microbiol       Date:  2022-09-08       Impact factor: 6.073

6.  Incidence of late-onset hemorrhagic cystitis and its effect on PFS in acute leukemia patients after haplo-PBSCT: The 5-year single-center data.

Authors:  Hailong Yuan; Gang Chen; Jianli Xu; Ruixue Yang; Maria Muhashi; Gulibadanmu Aizezi; Ming Jiang
Journal:  Front Oncol       Date:  2022-07-15       Impact factor: 5.738

  6 in total

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