| Literature DB >> 32110310 |
Steven J Barrow1, Khaleel I Assaf2, Aniello Palma1, Werner M Nau2, Oren A Scherman1.
Abstract
Whilst cucurbit[n]urils (CBn) have been utilized in gas encapsulation, only the smaller CBn (n = 5 and 6) have utility given their small cavity size. In this work, we demonstrate that the large cavity of CB8 can be tailored for gaseous and volatile hydrocarbon encapsulation by restricting its internal cavity size with auxiliary aryl-bisimidazolium (Bis, aryl = phenyl, naphthyl, and biphenyl) guests. The binding constants for light hydrocarbons (C ≤ 4) are similar to those measured with CB6, while larger values are obtained with Bis·CB8 for larger guests. A clear propensity for higher affinities of alkenes relative to alkanes is observed, most pronounced with the largest delocalized naphthalene residue in the auxiliary Bis guest, which provides unique evidence for sizable small-molecule π-π interactions. This journal is © The Royal Society of Chemistry 2019.Entities:
Year: 2019 PMID: 32110310 PMCID: PMC7006508 DOI: 10.1039/c9sc03282g
Source DB: PubMed Journal: Chem Sci ISSN: 2041-6520 Impact factor: 9.825
Fig. 1Chemical structures of (a) CB8, (b) the bisimidazolium auxiliary guests, and (c) their schematic complexes with CB8; differently shaped cavities shown in grey. (d) and (e) show the side and top views of the DFT-optimized (wB97XD/3-21G* level of theory) binary complex structures with the respective accessible cavity volume (Vcavity) highlighted in blue.
Calculated cavity volumes of CBn and Bis·CB8 complexes
| CB | Cavity volume/Å3 | Bis·CB8 | Cavity volume/Å3 |
| CB5 | 68 | Bis1·CB8 | 114 |
| CB6 | 142 | Bis2·CB8 | 126 |
| CB7 | 242 | Bis3·CB8 | 146 |
| CB8 | 367 |
From ref. 28.
Calculated from optimized structures, see Fig. 1.
Association constants (Ka) of hydrocarbons with Bis·CB8 systems and CBn, measured in neat water
| Guest |
| ||||
| Bis1·CB8 | Bis2·CB8 | Bis3·CB8 | CB6 | CB7 | |
| Methane | 0.6 ± 0.1 | 0.4 ± 0.1 | 0.6 | <2 | 3 |
| Ethane | 0.5 ± 0.1 | 24 | 3.4 | ||
| Propane | 14 | 180 | 6 | ||
|
| 580 | 89 | 35 ± 11 | 280 | 170 |
|
| 430 | 150 | 35 | ||
|
| 24 | 21 | 14 | ||
| Isobutane | 186 | 31 | 410 | 850 | 265 |
| Isobutene | 18 | 65 | 66 | 84 | 43 |
| Neopentane | 14 | 5600 | 9.3 | <2 | 1000 |
| Cyclopentane | 67 | 1300 | 196 | ||
| Cyclopentene | 290 | 260 [480] | 960 | 140 | 25 |
| Cyclopentanol | 2.0 | 6.7 | 5.9 | ||
| Cyclohexane | 66 | <2 | 1500 | ||
| 1,3-Cyclohexadiene | 88 | 530 | 1900 | ||
| Benzene | 85 | 170 [520] | [710] | <2 | 17 |
| Phenol | 3.0 | 32 ± 5 | 18 | ||
| I2 | 17 ± 2 | 21 ± 8 | 19 ± 4 | 1400 | 100 |
Error in Ka values is 15% unless stated differently.
From ref. 20.
From ref. 19.
Values in square brackets measured by ITC, 10% error unless stated differently, see Table S3 in ESI.
Measured in this work by indicator displacement.
Measured by UV-vis absorption titrations, see ESI.
From ref. 52.
Fig. 21H NMR spectra for the binding of (a) trans-butene to the Bis1·CB8 complex and (b) cis-butene to Bis2·CB8, in D2O.
Fig. 3(a) The encapsulation of a second guest within a Bis·CB8 complex enhances the fluorescence of the first guest; changes in fluorescence can be directly correlated to the binding strength of the second guest. (b) and (c) Changes in fluorescence spectra for Bis2·CB8 complexes, plotted versus wavelength and second guest concentration (inset) for (b) n-butane and (c) neopentane.
Guest solubility (S), guest volume (V), polarizability (α), hydration free energy (ΔGhydr), binding free energy (ΔGa) as measured in neat water, and corrected binding free energy for different CBn host–guest complexes; all energy values in kcal mol–1
| Guest |
|
|
| Δ | Bis2·CB8 | CB6 | CB7 | |||
| Δ |
| Δ |
| Δ |
| |||||
| Methane | 1.40 | 29 | 2.59 | 1.99 | –3.53 ± 0.17 | –1.54 | –4.74 | –2.75 | ||
| Ethane | 1.89 | 45 | 4.43 | 1.82 | –3.73 ± 0.13 | –1.92 | –5.98 | –4.16 | –4.82 | –3.00 |
| Propane | 1.52 | 63 | 6.37 | 1.94 | –5.66 | –3.72 | –7.17 | –5.23 | –5.15 | –3.21 |
|
| 1.25 | 80 | 8.2 | 2.06 | –6.75 | –4.69 | –7.43 | –5.37 | –7.14 | –5.08 |
|
| 3.99 | 74 | 8.0 | 1.37 | –7.69 | –6.31 | –7.06 | –5.69 | –6.20 | –4.83 |
|
| 4.11 | 74 | 8.49 | 1.36 | –5.98 | –4.62 | –5.90 | –4.54 | –5.66 | –4.30 |
| Isobutane | 0.92 | 79 | 8.14 | 2.24 | –6.13 | –3.89 | –8.09 | –5.85 | –7.40 | –5.16 |
| Isobutene | 4.69 | 75 | 8.29 | 1.28 | –6.57 | –5.29 | –6.72 | –5.44 | –6.32 | –5.04 |
| Neopentane | 0.46 | 96 | 9.99 | 2.65 | –9.21 | –6.56 | –8.19 | –5.54 | ||
| Cyclopentane | 2.24 | 86 | 9.15 | 1.20 | –6.58 | –5.38 | –8.33 | –7.13 | –7.22 | –6.02 |
| Cyclopentene | 7.93 | 81 | 8.87 | 0.55 | –7.39 | –6.84 | –7.02 | –6.47 | –6.00 | –5.45 |
| Cyclohexane | 0.69 | 102 | 11.0 | 1.19 | –6.57 | –5.38 | –8.4 | –7.21 | ||
| Benzene | 22.79 | 89 | 10.7 | –0.89 | –7.13 | –8.02 | –5.77 | –6.66 | ||
| I2 | 0.13 | 71 | 10.3 | –1.20 | –5.90 ± 0.28 | –7.10 | –8.38 | –9.58 | –6.82 | –8.02 |
From ref. 62.
Obtained from AM1-optimized structures by using the QSAR module of Hyperchem.
From ref. 19.
Calculated from the solubility (S) and vapor pressure (pvap) according to ΔGhydr = –RT ln(Sp0/pvap) – 1.90 kcal mol–1 with p0 = 101.325 kPa and pvap in kPa.
Obtained from binding constants in Table 2; error ±0.10 kcal mol–1, unless explicitly stated.
.
From ref. 20.
From ref. 19.
From ref. 63.
From ref. 64.
From ref. 52.
Fig. 4(a) Plot of as a function of guest polarizability (α) for Bis2·CB8, CB6, and CB7. (b) Plot of versus α of aryl-spacer in the Bis systems;58α calculated at the B3LYP/aug-ccpvdz level of theory, see ESI.† (c) Bar graph visualizing the selectivity of different CB cavities towards unsaturated hydrocarbons versus their fully saturated counterparts, with ; a positive value indicates stronger binding of the particular alkene/arene, a negative one a preference for the alkane.