Literature DB >> 32103446

Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.

Yun Jae Kim1,2, Jhung-Ahn Yang1, Jae Kyu Lim1,2, Mi-Jeong Park1,2, Sung-Hyun Yang1, Hyun Sook Lee1,2, Sung Gyun Kang1,2, Jung-Hyun Lee1,2, Kae Kyoung Kwon3,4.   

Abstract

An anaerobic, rod-shaped, mesophilic, chemolithoautotrophic, sulfate-reducing bacterial strain IOR2T was isolated from a newly found deep-sea hydrothermal vent (OVF, Onnuri Vent Field) area in the central Indian Ocean ridge (11°24'88″ S 66°25'42″ E, 2021 m water depth). The 16S rRNA gene sequence analysis revealed that the strain IOR2T was most closely related to Desulfovibrio senegalensis BLaC1T (96.7%). However, it showed low similarity with the members of the family Desulfovibrionaceae, such as Desulfovibrio tunisiensis RB22T (94.0%), D. brasiliensis LVform1T (93.9%), D. halophilus DSM 5663T (93.7%), and Pseudodesulfovibrio aespoeensis Aspo-2T (93.2%). The strain IOR2T could grow at 23-42°C (optimum 37°C), pH 5.0-8.0 (optimum pH 7.0) and with 0.5-6.5% (optimum 3.0%) NaCl. The strain could use lactate, pyruvate, H2, and glycerol as electron donors and sulfate, thiosulfate, and sulfite as electron acceptors. The major fatty acids of the strain IOR2T were iso-C15:0, iso-C17:0, ante-iso-C15:0, and summed feature 9 (C16:0 methyl/iso-C17:1ω9c). Both the strains IOR2T and BLaC1T could grow with CO2 and H2 as the sole sources of carbon and energy, respectively. Genomic evidence for the Wood-Ljungdahl pathway in both the strains reflects chemolithoautotrophic growth. The DNA G + C content of the strain IOR2T and BLaC1T was 58.1-60.5 mol%. Based on the results of the phylogenetic and physiologic studies, Paradesulfovibrio onnuriensis gen. nov., sp. nov. with the type strain IOR2T (= KCTC 15845T = MCCC 1K04559T) was proposed to be a member of the family Desulfovibrionaceae. We have also proposed the reclassification of D. senegalensis as Paradesulfovibrio senegalensis comb. nov.

Entities:  

Keywords:  Paradesulfovibrio onnuriensis; deep-sea sediment; sulfate-reducing bacteria

Year:  2020        PMID: 32103446     DOI: 10.1007/s12275-020-9376-0

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  3 in total

1.  Pseudodesulfovibrio sediminis sp. nov., a mesophilic and neutrophilic sulfate-reducing bacterium isolated from sediment of a brackish lake.

Authors:  Ayaka Takahashi; Hisaya Kojima; Miho Watanabe; Manabu Fukui
Journal:  Arch Microbiol       Date:  2022-05-09       Impact factor: 2.552

2.  Establishment of Genome Based Criteria for Classification of the Family Desulfovibrionaceae and Proposal of Two Novel Genera, Alkalidesulfovibrio gen. nov. and Salidesulfovibrio gen. nov.

Authors:  Mi-Jeong Park; Yun Jae Kim; Myeongkyu Park; Jihyun Yu; Teddy Namirimu; Yoo-Rim Roh; Kae Kyoung Kwon
Journal:  Front Microbiol       Date:  2022-05-25       Impact factor: 6.064

3.  A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments.

Authors:  Jaeho Song; Juchan Hwang; Ilnam Kang; Jang-Cheon Cho
Journal:  Sci Rep       Date:  2021-10-07       Impact factor: 4.379

  3 in total

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