Literature DB >> 32103426

Engineering the Translational Machinery for Biotechnology Applications.

Tianwen Wang1, Chen Liang1, Yafei An1, Sa Xiao1, Hongjv Xu1, Mengyuan Zheng1, Lu Liu1, Gaozhan Wang1, Lei Nie2.   

Abstract

The ribosome is an essential organelle in charge of the translational processes in all kinds of cells. Currently, the scenario of its function has been significantly expanded from the classic machine for protein synthesis to a regulatory platform for quality control to maintain the protein homeostasis in a living cell. The ribosome is much more than a mechanical device with a static structure: it is inherently dynamic in structure and function, especially in response to the environmental fluctuations. Considerable effort has been made to regulate its structure and physiological function by engineering the components of a ribosome. The findings of the pioneering studies significantly deepened our understanding of a ribosome and exemplified how a ribosome could be engineered for biotechnology purposes in the era of synthetic biology. The engineering of ribosome offered highly accessible methods capable of comprehensively optimizing the performance of strains of industrial importance. In this article, the relevant recent advances were systematically reviewed.

Keywords:  Antibiotic resistance; Chemical modification of protein; Non-canonical amino acid incorporation; Oriented enzyme immobilization; Ribosome engineering; Secondary metabolites

Mesh:

Substances:

Year:  2020        PMID: 32103426     DOI: 10.1007/s12033-020-00246-y

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  76 in total

Review 1.  Designer proteins: applications of genetic code expansion in cell biology.

Authors:  Lloyd Davis; Jason W Chin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-15       Impact factor: 94.444

Review 2.  Expanding the genetic code.

Authors:  Lei Wang; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2004-12-17       Impact factor: 15.336

Review 3.  How antibiotics kill bacteria: from targets to networks.

Authors:  Michael A Kohanski; Daniel J Dwyer; James J Collins
Journal:  Nat Rev Microbiol       Date:  2010-05-04       Impact factor: 60.633

4.  Translation system engineering in Escherichia coli enhances non-canonical amino acid incorporation into proteins.

Authors:  Rui Gan; Jessica G Perez; Erik D Carlson; Ioanna Ntai; Farren J Isaacs; Neil L Kelleher; Michael C Jewett
Journal:  Biotechnol Bioeng       Date:  2017-02-02       Impact factor: 4.530

5.  Increased expression of ribosome recycling factor is responsible for the enhanced protein synthesis during the late growth phase in an antibiotic-overproducing Streptomyces coelicolor ribosomal rpsL mutant.

Authors:  Takeshi Hosaka; Jun Xu; Kozo Ochi
Journal:  Mol Microbiol       Date:  2006-07-12       Impact factor: 3.501

6.  Innovative approach for improvement of an antibiotic-overproducing industrial strain of Streptomyces albus.

Authors:  Norimasa Tamehiro; Takeshi Hosaka; Jun Xu; Haifeng Hu; Noboru Otake; Kozo Ochi
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

7.  Arabidopsis ribosomal proteins RPL23aA and RPL23aB are differentially targeted to the nucleolus and are disparately required for normal development.

Authors:  Rory F Degenhardt; Peta C Bonham-Smith
Journal:  Plant Physiol       Date:  2008-03-05       Impact factor: 8.340

Review 8.  The Application of Ribosome Engineering to Natural Product Discovery and Yield Improvement in Streptomyces.

Authors:  Saibin Zhu; Yanwen Duan; Yong Huang
Journal:  Antibiotics (Basel)       Date:  2019-08-30

9.  Expanding the limits of the second genetic code with ribozymes.

Authors:  Joongoo Lee; Kenneth E Schwieter; Andrew M Watkins; Do Soon Kim; Hao Yu; Kevin J Schwarz; Jongdoo Lim; Jaime Coronado; Michelle Byrom; Eric V Anslyn; Andrew D Ellington; Jeffrey S Moore; Michael C Jewett
Journal:  Nat Commun       Date:  2019-11-08       Impact factor: 14.919

10.  High-affinity recognition of specific tRNAs by an mRNA anticodon-binding groove.

Authors:  Krishna C Suddala; Jinwei Zhang
Journal:  Nat Struct Mol Biol       Date:  2019-12-02       Impact factor: 15.369

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