Literature DB >> 32101713

Dissecting Particle Uptake Heterogeneity in a Cell Population Using Bayesian Analysis.

Md Shahinuzzaman1, Dipak Barua2.   

Abstract

Individual cells in a solution display variable uptake of nanomaterials, peptides, and nutrients. Such variability reflects their heterogeneity in endocytic capacity. In a recent work, we have shown that the endocytic capacity of a cell depends on its size and surface density of endocytic components (transporters). We also demonstrated that in MDA-MB-231 breast cancer cells, the cell-surface transporter density (n) may decay with cell radius (r) following the power rule n ∼ rα, where α ≈ -1. In this work, we investigate how n and r may independently contribute to the endocytic heterogeneity of a cell population. Our analysis indicates that the smaller cells display more heterogeneity because of the higher stochastic variations in n. By contrast, the larger cells display a more uniform uptake, reflecting less-stochastic variations in n. We provide analyses of these dependencies by establishing a stochastic model. Our analysis reveals that the exponent α in the above relationship is not a constant; rather, it is a random variable whose distribution depends on cell size r. Using Bayesian analysis, we characterize the cell-size-dependent distributions of α that accurately capture the particle uptake heterogeneity of MDA-MB-231 cells.
Copyright © 2020 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Year:  2020        PMID: 32101713      PMCID: PMC7136283          DOI: 10.1016/j.bpj.2020.01.043

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

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Authors:  Rebecca C Lobo; Neil E Hubbard; Patrizia Damonte; Hidetoshi Mori; Zsófia Pénzváltó; Cindy Pham; Amanda L Koehne; Aiza C Go; Steve E Anderson; Peter M Cala; Alexander D Borowsky
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Journal:  Nat Commun       Date:  2018-10-29       Impact factor: 14.919

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