| Literature DB >> 32098293 |
Oleg V Mikhailov1, Denis V Chachkov2.
Abstract
The quantum-chemical calculation of iron,Entities:
Keywords: 3,7,11,15-tetraazaporphine; DFT method; iron(VI): cobalt(VI); nickel(VI); oxo ligand
Year: 2020 PMID: 32098293 PMCID: PMC7073053 DOI: 10.3390/ijms21041494
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Bond lengths and bond angles in the [ML(O)2] complexes of Type I (M = Fe, Co, Ni).
| Structural Parameter | [FeL(O)2] | [CoL(O)2] | [NiL(O)2] |
|---|---|---|---|
| M–N bond lengths in chelate node MN4, | |||
| M1N1 | 193.8 | 192.2 | 191.6 |
| M1N2 | 193.8 | 193.2 | 191.6 |
| M1N3 | 196.3 | 194.2 | 191.6 |
| M1N4 | 196.3 | 193.2 | 191.6 |
| C–N bond lengths in 6-numbered chelate rings, | |||
| N1C3 | 136.3 | 136.4 | 136.5 |
| N1C4 | 136.4 | 136.4 | 136.5 |
| N2C1 | 136.4 | 136.3 | 136.5 |
| N2C2 | 136.3 | 136.2 | 136.5 |
| N3C7 | 136.2 | 136.7 | 136.5 |
| N3C8 | 136.1 | 136.7 | 136.5 |
| N4C5 | 136.1 | 136.2 | 136.5 |
| N4C6 | 136.2 | 136.3 | 136.5 |
| N5C2 | 132.7 | 132.4 | 132.1 |
| N5C3 | 132.7 | 132.4 | 132.1 |
| N6C6 | 132.7 | 132.4 | 132.1 |
| N6C7 | 132.7 | 132.3 | 132.1 |
| N7C4 | 132.7 | 132.4 | 132.1 |
| N7C5 | 132.7 | 132.4 | 132.1 |
| N8C1 | 132.7 | 132.4 | 132.1 |
| N8C8 | 132.7 | 132.3 | 132.1 |
| C–C bond lengths in 5-numbered chelate ring (C1N1C4C9C10C3), | |||
| C4C9 | 145.3 | 145.2 | 145.0 |
| C9C10 | 135.8 | 135.7 | 135.6 |
| C10C3 | 145.3 | 145.2 | 145.0 |
| M–O bond lengths, | |||
| M1O1 | 162.7 | 168.9 | 180.8 |
| M1O2 | 162.7 | 168.9 | 180.8 |
| Bond angles in chelate node MN4, | |||
| (N1M1N2) | 90.4 | 90.1 | 90.0 |
| (N2M1N3) | 90.0 | 89.9 | 90.0 |
| (N3M1N4) | 89.6 | 89.9 | 90.0 |
| (N4M1N1) | 90.0 | 90.1 | 90.0 |
| Bond angles sum ( | 360.0 | 360.0 | 360.0 |
| Non-bond angles between N atoms in N4 grouping, | |||
| (N1N2N3) | 90.2 | 90.0 | 90.0 |
| (N2N3N4) | 89.8 | 89.8 | 90.0 |
| (N3N4N1) | 89.8 | 90.0 | 90.0 |
| (N4N1N2) | 90.2 | 90.2 | 90.0 |
| Non-bond angles sum (NBAS), | 360.0 | 360.0 | 360.0 |
| Bond angles in 6-numbered chelate ring (M1N1C4N7C5N4), | |||
| (M1N1C4) | 125.9 | 126.1 | 126.2 |
| (N1C4N7) | 128.4 | 128.3 | 128.5 |
| (C4N7C5) | 122.1 | 121.3 | 120.6 |
| (N7C5N4) | 127.9 | 128.1 | 128.5 |
| (C5N4M1) | 125.7 | 126.1 | 126.2 |
| (N4M1N1) | 90.0 | 90.1 | 90.0 |
| Bond angles sum (BAS61), | 720.0 | 720.0 | 720.0 |
| Bond angles in 6-numbered chelate ring (M1N2C2N5C3N1), | |||
| (M1N2C2) | 125.8 | 126.1 | 126.2 |
| (N2C2N5) | 128.1 | 128.1 | 128.5 |
| (C2N5C3) | 121.9 | 121.3 | 120.6 |
| (N5C3N1) | 128.1 | 128.3 | 128.5 |
| (C3N1M1) | 125.7 | 126.1 | 126.2 |
| (N1M1N2) | 90.4 | 90.1 | 90.0 |
| Bond angles sum (BAS62), | 720.0 | 720.0 | 720.0 |
| Bond angles in 6-numbered chelate ring (M1N3C8N8C1N2), | |||
| (M1N3C8) | 125.7 | 125.9 | 126.2 |
| (N3C8N8) | 127.9 | 128.2 | 128.5 |
| (C8N8C1) | 122.1 | 121.4 | 120.6 |
| (N8C1N2) | 128.4 | 128.5 | 128.5 |
| (C1N2M1) | 125.9 | 126.1 | 126.2 |
| (N2M1N3) | 90.0 | 89.9 | 90.0 |
| Bond angles sum (BAS63), | 720.0 | 720.0 | 720.0 |
| Bond angles in 6-numbered chelate ring (M1N4C6N6C7N3), | |||
| (M1N4C6) | 125.9 | 126.1 | 126.2 |
| (N4C6N6) | 128.2 | 128.5 | 128.5 |
| (C6N6C7) | 122.2 | 121.4 | 120.6 |
| (N6C7N3) | 128.2 | 128.2 | 128.5 |
| (C7N3M1) | 125.9 | 125.9 | 126.2 |
| (N3M1N4) | 89.6 | 89.9 | 90.0 |
| Bond angles sum (BAS64), | 720.0 | 720.0 | 720.0 |
| Bond angles in 5-numbered ring (C3N1C4C9C10), | |||
| (C3N1C4) | 108.3 | 107.8 | 107.4 |
| (N1C4C9) | 108.7 | 109.1 | 109.3 |
| (C4C9C10) | 107.1 | 107.0 | 107.0 |
| (C9C10C3) | 107.1 | 107.0 | 107.0 |
| (C10C3N1) | 108.8 | 109.1 | 109.1 |
| Bond angles sum (BAS51), | 540.0 | 540.0 | 540.0 |
| Bond angles between O, M and N atoms, | |||
| O1M1N1 | 92.4 | 94.9 | 89.2 |
| O1M1N2 | 92.5 | 90.0 | 90.8 |
| O1M1N3 | 87.6 | 85.1 | 89.2 |
| O1M1N4 | 87.5 | 90.0 | 90.8 |
| Bond angles between O, M and O atoms, | |||
| O1M1O2 | 173.1 | 170.1 | 180.0 |
Figure 1Molecular structures of [ML(O)2] complexes obtained as a result of the density functional theory (DFT) OPBE/TZVP method quantum-chemical calculation: a: Fe(VI), b: Co(VI), c: Ni(VI).
Standard thermodynamic parameters of formation (ΔH0, 298, S0, 298 and ΔG0, 298) for the complexes of Type I.
| Complex | |||
|---|---|---|---|
| [FeL(O)2] | 438.2 | 758.7 | 663.4 |
| [CoL(O)2] | 616.3 | 759.8 | 842.1 |
| [NiL(O)2] | 780.9 | 784.3 | 999.3 |