Literature DB >> 32089117

Unifying the essential concepts of biological networks: biological insights and philosophical foundations.

Daniel Kostić1, Claus C Hilgetag2,3, Marc Tittgemeyer4,5.   

Abstract

Over the last decades, network-based approaches have become highly popular in diverse fields of biology, including neuroscience, ecology, molecular biology and genetics. While these approaches continue to grow very rapidly, some of their conceptual and methodological aspects still require a programmatic foundation. This challenge particularly concerns the question of whether a generalized account of explanatory, organizational and descriptive levels of networks can be applied universally across biological sciences. To this end, this highly interdisciplinary theme issue focuses on the definition, motivation and application of key concepts in biological network science, such as explanatory power of distinctively network explanations, network levels and network hierarchies. This article is part of the theme issue 'Unifying the essential concepts of biological networks: biological insights and philosophical foundations'.

Keywords:  biological complexity; biological networks; exploratory models; network hierarchies; topological explanation; topological modularity

Mesh:

Year:  2020        PMID: 32089117      PMCID: PMC7061958          DOI: 10.1098/rstb.2019.0314

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  18 in total

1.  Cortical parcellation based on structural connectivity: A case for generative models.

Authors:  Marc Tittgemeyer; Lionel Rigoux; Thomas R Knösche
Journal:  Neuroimage       Date:  2018-01-31       Impact factor: 6.556

2.  Hierarchy and levels: analysing networks to study mechanisms in molecular biology.

Authors:  William Bechtel
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

3.  General theory of topological explanations and explanatory asymmetry.

Authors:  Daniel Kostić
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

4.  From inert matter to the global society life as multi-level networks of processes.

Authors:  David Chavalarias
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

5.  Exploring modularity in biological networks.

Authors:  Maria Serban
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

6.  Network explanations and explanatory directionality.

Authors:  Lina Jansson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

7.  Is the brain really a small-world network?

Authors:  Claus C Hilgetag; Alexandros Goulas
Journal:  Brain Struct Funct       Date:  2015-04-18       Impact factor: 3.270

Review 8.  Multi-scale brain networks.

Authors:  Richard F Betzel; Danielle S Bassett
Journal:  Neuroimage       Date:  2016-11-11       Impact factor: 6.556

9.  'Hierarchy' in the organization of brain networks.

Authors:  Claus C Hilgetag; Alexandros Goulas
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

10.  Network architectures supporting learnability.

Authors:  Perry Zurn; Danielle S Bassett
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-24       Impact factor: 6.237

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