Literature DB >> 32083960

Entering the era of computationally driven drug development.

Neha Maharao1, Victor Antontsev1, Matthew Wright2, Jyotika Varshney1.   

Abstract

Historically, failure rates in drug development are high; increased sophistication and investment throughout the process has shifted the reasons for attrition, but the overall success rates have remained stubbornly and consistently low. Only 8% of new entities entering clinical testing gain regulatory approval, indicating that significant obstacles still exist for efficient therapeutic development. The continued high failure rate can be partially attributed to the inability to link drug exposure with the magnitude of observed safety and efficacy-related pharmacodynamic (PD) responses; frequently, this is a result of nonclinical models exhibiting poor prediction of human outcomes across a wide range of disease conditions, resulting in faulty evaluation of drug toxicology and efficacy. However, the increasing quality and standardization of experimental methods in preclinical stages of testing has created valuable data sets within companies that can be leveraged to further improve the efficiency and accuracy of preclinical prediction for both pharmacokinetics (PK) and PD. Models of Quantitative structure-activity relationships (QSAR), physiologically based pharmacokinetics (PBPK), and PK/PD relationships have also improved efficiency. Founded on a core understanding of biochemistry and physiological interactions of xenobiotics, these in silico methods have the potential to increase the probability of compound success in clinical trials. Integration of traditional computational methods with machine-learning approaches and existing internal pharma databases stands to make a fundamental impact on the speed and accuracy of predictions during the process of drug development and approval.

Entities:  

Keywords:  In silico; artificial intelligence; drug development; drug discovery; modeling

Mesh:

Year:  2020        PMID: 32083960     DOI: 10.1080/03602532.2020.1726944

Source DB:  PubMed          Journal:  Drug Metab Rev        ISSN: 0360-2532            Impact factor:   4.518


  6 in total

1.  Scalable in silico Simulation of Transdermal Drug Permeability: Application of BIOiSIM Platform.

Authors:  Neha Maharao; Victor Antontsev; Hypatia Hou; Jason Walsh; Jyotika Varshney
Journal:  Drug Des Devel Ther       Date:  2020-06-11       Impact factor: 4.162

2.  Effects of Magnesium, Calcium, and Aluminum Chelation on Fluoroquinolone Absorption Rate and Bioavailability: A Computational Study.

Authors:  Daniel M Walden; Maksim Khotimchenko; Hypatia Hou; Kaushik Chakravarty; Jyotika Varshney
Journal:  Pharmaceutics       Date:  2021-04-21       Impact factor: 6.321

Review 3.  High-throughput screening assays for SARS-CoV-2 drug development: current status and future directions.

Authors:  Tuan Xu; Wei Zheng; Ruili Huang
Journal:  Drug Discov Today       Date:  2021-05-25       Impact factor: 7.851

4.  A hybrid modeling approach for assessing mechanistic models of small molecule partitioning in vivo using a machine learning-integrated modeling platform.

Authors:  Victor Antontsev; Aditya Jagarapu; Yogesh Bundey; Hypatia Hou; Maksim Khotimchenko; Jason Walsh; Jyotika Varshney
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

5.  Accelerated Repurposing and Drug Development of Pulmonary Hypertension Therapies for COVID-19 Treatment Using an AI-Integrated Biosimulation Platform.

Authors:  Kaushik Chakravarty; Victor G Antontsev; Maksim Khotimchenko; Nilesh Gupta; Aditya Jagarapu; Yogesh Bundey; Hypatia Hou; Neha Maharao; Jyotika Varshney
Journal:  Molecules       Date:  2021-03-29       Impact factor: 4.411

Review 6.  Two heads are better than one: current landscape of integrating QSP and machine learning : An ISoP QSP SIG white paper by the working group on the integration of quantitative systems pharmacology and machine learning.

Authors:  Tongli Zhang; Ioannis P Androulakis; Peter Bonate; Limei Cheng; Tomáš Helikar; Jaimit Parikh; Christopher Rackauckas; Kalyanasundaram Subramanian; Carolyn R Cho
Journal:  J Pharmacokinet Pharmacodyn       Date:  2022-02-01       Impact factor: 2.745

  6 in total

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