Literature DB >> 32066961

Chemogenetic Control of Nanobodies.

Helen Farrants1,2, Miroslaw Tarnawski3, Thorsten G Müller4, Shotaro Otsuka5,6, Julien Hiblot1, Birgit Koch1, Moritz Kueblbeck5, Hans-Georg Kräusslich4, Jan Ellenberg5, Kai Johnsson7,8.   

Abstract

We introduce an engineered nanobody whose affinity to green fluorescent protein (GFP) can be switched on and off with small molecules. By controlling the cellular localization of GFP fusion proteins, the engineered nanobody allows interrogation of their roles in basic biological processes, an approach that should be applicable to numerous previously described GFP fusions. We also outline how the binding affinities of other nanobodies can be controlled by small molecules.

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Year:  2020        PMID: 32066961     DOI: 10.1038/s41592-020-0746-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  27 in total

1.  Optogenetic activation of intracellular antibodies for direct modulation of endogenous proteins.

Authors:  Daseuli Yu; Hansol Lee; Jongryul Hong; Hyunjin Jung; YoungJu Jo; Byung-Ha Oh; Byung Ouk Park; Won Do Heo
Journal:  Nat Methods       Date:  2019-10-14       Impact factor: 28.547

2.  Modulation of protein properties in living cells using nanobodies.

Authors:  Axel Kirchhofer; Jonas Helma; Katrin Schmidthals; Carina Frauer; Sheng Cui; Annette Karcher; Mireille Pellis; Serge Muyldermans; Corella S Casas-Delucchi; M Cristina Cardoso; Heinrich Leonhardt; Karl-Peter Hopfner; Ulrich Rothbauer
Journal:  Nat Struct Mol Biol       Date:  2009-12-13       Impact factor: 15.369

3.  Immunoglobulins from amyotrophic lateral sclerosis patients enhance spontaneous transmitter release from motor-nerve terminals.

Authors:  O D Uchitel; S H Appel; F Crawford; L Sczcupak
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

4.  Development and use of multi-inoculation test methods for a taxonomic study.

Authors:  M Stevens
Journal:  J Med Lab Technol       Date:  1969-07

5.  Molecular basis for the preferential cleft recognition by dromedary heavy-chain antibodies.

Authors:  Erwin De Genst; Karen Silence; Klaas Decanniere; Katja Conrath; Remy Loris; Jörg Kinne; Serge Muyldermans; Lode Wyns
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-13       Impact factor: 11.205

6.  sdAb-DB: The Single Domain Antibody Database.

Authors:  Emily E Wilton; Michael P Opyr; Senthilkumar Kailasam; Ronja F Kothe; Hans-Joachim Wieden
Journal:  ACS Synth Biol       Date:  2018-11-16       Impact factor: 5.110

7.  Effects of the length of a glycine linker connecting the N-and C-termini of a circularly permuted dihydrofolate reductase.

Authors:  M Iwakura; T Nakamura
Journal:  Protein Eng       Date:  1998-08

8.  How lamina-associated polypeptide 1 (LAP1) activates Torsin.

Authors:  Brian A Sosa; F Esra Demircioglu; James Z Chen; Jessica Ingram; Hidde L Ploegh; Thomas U Schwartz
Journal:  Elife       Date:  2014-08-22       Impact factor: 8.140

9.  The ALFA-tag is a highly versatile tool for nanobody-based bioscience applications.

Authors:  Hansjörg Götzke; Markus Kilisch; Markel Martínez-Carranza; Shama Sograte-Idrissi; Abirami Rajavel; Thomas Schlichthaerle; Niklas Engels; Ralf Jungmann; Pål Stenmark; Felipe Opazo; Steffen Frey
Journal:  Nat Commun       Date:  2019-09-27       Impact factor: 14.919

10.  Structure of cyclin G-associated kinase (GAK) trapped in different conformations using nanobodies.

Authors:  Apirat Chaikuad; Tracy Keates; Cécile Vincke; Melanie Kaufholz; Michael Zenn; Bastian Zimmermann; Carlos Gutiérrez; Rong-Guang Zhang; Catherine Hatzos-Skintges; Andrzej Joachimiak; Serge Muyldermans; Friedrich W Herberg; Stefan Knapp; Susanne Müller
Journal:  Biochem J       Date:  2014-04-01       Impact factor: 3.857

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  22 in total

1.  Design of Smart Antibody Mimetics with Photosensitive Switches.

Authors:  Lian He; Peng Tan; Yun Huang; Yubin Zhou
Journal:  Adv Biol (Weinh)       Date:  2021-02-05

Review 2.  Exploring cellular biochemistry with nanobodies.

Authors:  Ross W Cheloha; Thibault J Harmand; Charlotte Wijne; Thomas U Schwartz; Hidde L Ploegh
Journal:  J Biol Chem       Date:  2020-08-31       Impact factor: 5.157

3.  Structure-based design of a photoswitchable affibody scaffold.

Authors:  Ryan M Woloschuk; P Maximilian M Reed; Anna S I Jaikaran; Karl Z Demmans; Jeffrey Youn; Voula Kanelis; Maruti Uppalapati; G Andrew Woolley
Journal:  Protein Sci       Date:  2021-10-09       Impact factor: 6.725

4.  Nanobodies: From Serendipitous Discovery of Heavy Chain-Only Antibodies in Camelids to a Wide Range of Useful Applications.

Authors:  Fangling Ji; Jun Ren; Cécile Vincke; Lingyun Jia; Serge Muyldermans
Journal:  Methods Mol Biol       Date:  2022

5.  Fluorogenic Cyclopropenones for Multicomponent, Real-Time Imaging.

Authors:  Tyler K Heiss; Robert S Dorn; Andrew J Ferreira; Anna C Love; Jennifer A Prescher
Journal:  J Am Chem Soc       Date:  2022-04-20       Impact factor: 16.383

6.  O-GlcNAc Engineering on a Target Protein in Cells with Nanobody-OGT and Nanobody-splitOGA.

Authors:  Daniel H Ramirez; Yun Ge; Christina M Woo
Journal:  Curr Protoc       Date:  2021-05

7.  Precision control of intrabodies in live cells.

Authors:  Alexander M Marzilli; Jeffrey B McMahan; John T Ngo
Journal:  Nat Methods       Date:  2020-03       Impact factor: 47.990

8.  Nanobody-directed targeting of optogenetic tools to study signaling in the primary cilium.

Authors:  Jan N Hansen; Fabian Kaiser; Christina Klausen; Birthe Stüven; Raymond Chong; Wolfgang Bönigk; David U Mick; Andreas Möglich; Nathalie Jurisch-Yaksi; Florian I Schmidt; Dagmar Wachten
Journal:  Elife       Date:  2020-06-24       Impact factor: 8.140

Review 9.  The Masking Game: Design of Activatable Antibodies and Mimetics for Selective Therapeutics and Cell Control.

Authors:  Roberta Lucchi; Jordi Bentanachs; Benjamí Oller-Salvia
Journal:  ACS Cent Sci       Date:  2021-04-26       Impact factor: 14.553

10.  Optogenetic control of protein binding using light-switchable nanobodies.

Authors:  Agnieszka A Gil; César Carrasco-López; Liyuan Zhu; Evan M Zhao; Pavithran T Ravindran; Maxwell Z Wilson; Alexander G Goglia; José L Avalos; Jared E Toettcher
Journal:  Nat Commun       Date:  2020-08-13       Impact factor: 14.919

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