Literature DB >> 32062398

Allosteric drugs and mutations: chances, challenges, and necessity.

Enrico Guarnera1, Igor N Berezovsky2.   

Abstract

Allosteric drugs have become an indispensable toolbox of rapidly developing precision medicine, having already established reputation of advantages over traditional medicines. Allosteric mechanisms are also widely involved in the action of SNPs and latent cancer drivers, and can be used in fine and specific tuning of biologics, providing a great potential in diagnostics and therapy. We discuss here major targets for prospected allosteric medicines, currently available allosteric compounds, and drug-candidates at different stages of research and (pre)clinical trials. We describe our computational model of the comprehensive allosteric control of protein activity, outlining the ways of implementing it in pharmacological applications. Finally, we formulate outstanding questions and discuss feasible directions in the work on allosteric drugs and mutations.
Copyright © 2020 Elsevier Ltd. All rights reserved.

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Year:  2020        PMID: 32062398     DOI: 10.1016/j.sbi.2020.01.010

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  21 in total

Review 1.  Inhibition of Nonfunctional Ras.

Authors:  Ruth Nussinov; Hyunbum Jang; Attila Gursoy; Ozlem Keskin; Vadim Gaponenko
Journal:  Cell Chem Biol       Date:  2021-01-12       Impact factor: 8.116

Review 2.  Allostery, and how to define and measure signal transduction.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Hyunbum Jang
Journal:  Biophys Chem       Date:  2022-01-29       Impact factor: 2.352

Review 3.  Allostery Modulates Interactions between Proteasome Core Particles and Regulatory Particles.

Authors:  Philip Coffino; Yifan Cheng
Journal:  Biomolecules       Date:  2022-05-30

4.  Mapping the energetic and allosteric landscapes of protein binding domains.

Authors:  Andre J Faure; Júlia Domingo; Jörn M Schmiedel; Cristina Hidalgo-Carcedo; Guillaume Diss; Ben Lehner
Journal:  Nature       Date:  2022-04-06       Impact factor: 69.504

Review 5.  Allostery: Allosteric Cancer Drivers and Innovative Allosteric Drugs.

Authors:  Ruth Nussinov; Mingzhen Zhang; Ryan Maloney; Yonglan Liu; Chung-Jung Tsai; Hyunbum Jang
Journal:  J Mol Biol       Date:  2022-04-01       Impact factor: 6.151

6.  AlloSigMA 2: paving the way to designing allosteric effectors and to exploring allosteric effects of mutations.

Authors:  Zhen Wah Tan; Enrico Guarnera; Wei-Ven Tee; Igor N Berezovsky
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971

7.  Mechanism of allosteric activation of SIRT6 revealed by the action of rationally designed activators.

Authors:  Shaoyong Lu; Yingyi Chen; Jiacheng Wei; Mingzhu Zhao; Duan Ni; Xinheng He; Jian Zhang
Journal:  Acta Pharm Sin B       Date:  2020-09-19       Impact factor: 11.413

8.  Rheostat positions: A new classification of protein positions relevant to pharmacogenomics.

Authors:  Aron W Fenton; Braelyn M Page; Arianna Spellman-Kruse; Bruno Hagenbuch; Liskin Swint-Kruse
Journal:  Med Chem Res       Date:  2020-06-07       Impact factor: 1.965

9.  A Coarse-Grained Methodology Identifies Intrinsic Mechanisms That Dissociate Interacting Protein Pairs.

Authors:  Haleh Abdizadeh; Farzaneh Jalalypour; Ali Rana Atilgan; Canan Atilgan
Journal:  Front Mol Biosci       Date:  2020-08-25

10.  Accurate Representation of Protein-Ligand Structural Diversity in the Protein Data Bank (PDB).

Authors:  Nicolas K Shinada; Peter Schmidtke; Alexandre G de Brevern
Journal:  Int J Mol Sci       Date:  2020-03-24       Impact factor: 5.923

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