Literature DB >> 32056450

Hierarchical Organization of Functional Brain Networks Revealed by Hybrid Spatiotemporal Deep Learning.

Wei Zhang1, Shijie Zhao2, Xintao Hu2, Qinglin Dong1, Heng Huang2, Shu Zhang1, Yu Zhao1, Haixing Dai1, Fangfei Ge1, Lei Guo2, Tianming Liu1.   

Abstract

Hierarchical organization of brain function has been an established concept in the neuroscience field for a long time, however, it has been rarely demonstrated how such hierarchical macroscale functional networks are actually organized in the human brain. In this study, to answer this question, we propose a novel methodology to provide an evidence of hierarchical organization of functional brain networks. This article introduces the hybrid spatiotemporal deep learning (HSDL), by jointly using deep belief networks (DBNs) and deep least absolute shrinkage and selection operator (LASSO) to reveal the temporal hierarchical features and spatial hierarchical maps of brain networks based on the Human Connectome Project 900 functional magnetic resonance imaging (fMRI) data sets. Briefly, the key idea of HSDL is to extract the weights between two adjacent layers of DBNs, which are then treated as the hierarchical dictionaries for deep LASSO to identify the corresponding hierarchical spatial maps. Our results demonstrate that both spatial and temporal aspects of dozens of functional networks exhibit multiscale properties that can be well characterized and interpreted based on existing computational tools and neuroscience knowledge. Our proposed novel hybrid deep model is used to provide the first insightful opportunity to reveal the potential hierarchical organization of time series and functional brain networks, using task-based fMRI signals of human brain.

Entities:  

Keywords:  brain networks; deep learning; hierarchical organization; hybrid spatiotemporal representation

Mesh:

Year:  2020        PMID: 32056450      PMCID: PMC7099414          DOI: 10.1089/brain.2019.0701

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  43 in total

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Authors:  A H Andersen; D M Gash; M J Avison
Journal:  Magn Reson Imaging       Date:  1999-07       Impact factor: 2.546

2.  A data-driven sparse GLM for fMRI analysis using sparse dictionary learning with MDL criterion.

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3.  Brain dynamics during natural viewing conditions--a new guide for mapping connectivity in vivo.

Authors:  Andreas Bartels; Semir Zeki
Journal:  Neuroimage       Date:  2005-01-15       Impact factor: 6.556

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Authors:  G E Hinton; R R Salakhutdinov
Journal:  Science       Date:  2006-07-28       Impact factor: 47.728

Review 5.  The multiple-demand (MD) system of the primate brain: mental programs for intelligent behaviour.

Authors:  John Duncan
Journal:  Trends Cogn Sci       Date:  2010-02-18       Impact factor: 20.229

Review 6.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

7.  Supervised dictionary learning for inferring concurrent brain networks.

Authors:  Shijie Zhao; Junwei Han; Jinglei Lv; Xi Jiang; Xintao Hu; Yu Zhao; Bao Ge; Lei Guo; Tianming Liu
Journal:  IEEE Trans Med Imaging       Date:  2015-04-01       Impact factor: 10.048

8.  Extendable supervised dictionary learning for exploring diverse and concurrent brain activities in task-based fMRI.

Authors:  Shijie Zhao; Junwei Han; Xintao Hu; Xi Jiang; Jinglei Lv; Tuo Zhang; Shu Zhang; Lei Guo; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2018-06       Impact factor: 3.978

9.  Latent source mining in FMRI via restricted Boltzmann machine.

Authors:  Xintao Hu; Heng Huang; Bo Peng; Junwei Han; Nian Liu; Jinglei Lv; Lei Guo; Christine Guo; Tianming Liu
Journal:  Hum Brain Mapp       Date:  2018-02-18       Impact factor: 5.038

10.  Restricted Boltzmann machines for neuroimaging: an application in identifying intrinsic networks.

Authors:  R Devon Hjelm; Vince D Calhoun; Ruslan Salakhutdinov; Elena A Allen; Tulay Adali; Sergey M Plis
Journal:  Neuroimage       Date:  2014-03-28       Impact factor: 6.556

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  1 in total

1.  Control energy assessment of spatial interactions among macro-scale brain networks.

Authors:  Jing Yuan; Senquan Ji; Liao Luo; Jinglei Lv; Tianming Liu
Journal:  Hum Brain Mapp       Date:  2022-01-24       Impact factor: 5.038

  1 in total

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