| Literature DB >> 32054544 |
Ye Chen1, Kunkun Leng2, Ying Lu1, Lihai Wen1, Ying Qi1, Wei Gao1, Huijie Chen1, Lina Bai1, Xiangdong An1, Baijun Sun1, Ping Wang1, Jing Dong2.
Abstract
In recent years, there have been a significant influenza activity and emerging influenza strains in China, resulting in an increasing number of influenza virus infections and leading to public health concerns. The aims of this study were to identify the epidemiological and aetiological characteristics of influenza and establish seasonal autoregressive integrated moving average (SARIMA) models for forecasting the percentage of visits for influenza-like illness (ILI%) in urban and rural areas of Shenyang. Influenza surveillance data were obtained for ILI cases and influenza virus positivity from 18 sentinel hospitals. The SARIMA models were constructed to predict ILI% for January-December 2019. During 2010-2018, the influenza activity was higher in urban than in rural areas. The age distribution of ILI cases showed the highest rate in young children aged 0-4 years. Seasonal A/H3N2, influenza B virus and pandemic A/H1N1 continuously co-circulated in winter and spring seasons. In addition, the SARIMA (0, 1, 0) (0, 1, 2)12 model for the urban area and the SARIMA (1, 1, 1) (1, 1, 0)12 model for the rural area were appropriate for predicting influenza incidence. Our findings suggested that there were regional and seasonal distinctions of ILI activity in Shenyang. A co-epidemic pattern of influenza strains was evident in terms of seasonal influenza activity. Young children were more susceptible to influenza virus infection than adults. These results provide a reference for future influenza prevention and control strategies in the study area.Entities:
Keywords: Influenza strains; influenza-like illness; seasonal distinctions; surveillance
Year: 2020 PMID: 32054544 PMCID: PMC7026897 DOI: 10.1017/S0950268820000151
Source DB: PubMed Journal: Epidemiol Infect ISSN: 0950-2688 Impact factor: 2.451
Fig. 1.The monthly percentage of visits for influenza-like illness (ILI%) of urban and rural areas in Shenyang, 2010–2018.
Distribution of the influenza-like illness (ILI) cases by age and season group in urban and rural areas of Shenyang, 2010–2018
| 0–4 | 5–14 | 15–24 | 25–59 | ≥60 | ||||
|---|---|---|---|---|---|---|---|---|
| Characteristic | No. of ILI | No. of ILI | No. of ILI | No. of ILI | No. of ILI | Total | No. of outpatients | ILI% |
| Year | ||||||||
| 2010 | 25 056 (41.35%) | 10 781 (17.79%) | 6829 (11.27%) | 12 283 (20.27%) | 5645 (9.31%) | 60 594 | 2 006 038 | 3.02 |
| 2011 | 21 418 (46.13%) | 8007 (17.25%) | 4691 (10.10%) | 8442 (18.18%) | 3869 (8.33%) | 46 427 | 2 077 450 | 2.23 |
| 2012 | 36 508 (48.99%) | 17 449 (23.42%) | 5985 (8.03%) | 9505 (12.76%) | 5072 (6.81%) | 74 519 | 2 150 585 | 3.47 |
| 2013 | 37 723 (43.71%) | 19 687 (22.81%) | 7589 (8.79%) | 14 977 (17.35%) | 6330 (7.33%) | 86 306 | 2 301 073 | 3.75 |
| 2014 | 38 383 (41.96%) | 23 878 (26.10%) | 5882 (6.43%) | 17 432 (19.06%) | 5896 (6.45%) | 91 471 | 2 386 773 | 3.83 |
| 2015 | 38 142 (50.26%) | 20 397 (26.88%) | 3601 (4.75%) | 9982 (13.15%) | 3767 (4.96%) | 75 889 | 2 870 874 | 2.64 |
| 2016 | 48 238 (48.56%) | 23 766 (23.93%) | 5205 (5.24%) | 15 936 (16.04%) | 6188 (6.23%) | 99 333 | 3 252 130 | 3.05 |
| 2017 | 61 740 (53.76%) | 25 197 (21.94%) | 5054 (4.40%) | 16 221 (14.12%) | 6631 (5.77%) | 114 843 | 3 432 701 | 3.35 |
| 2018 | 46 201 (44.72%) | 24 737 (23.94%) | 6014 (5.82%) | 18 306 (17.72%) | 8055 (7.80%) | 103 313 | 3 681 691 | 2.81 |
| Seasons | ||||||||
| Spring (Mar–May) | 80 777 (45.77%) | 38 925 (22.05%) | 13 248 (7.51%) | 30 470 (17.26%) | 13 082 (7.41%) | 176 502 | 6 050 491 | 2.92 |
| Summer (Jun–Aug) | 90 386 (49.90%) | 43 577 (24.06%) | 10 480 (5.78%) | 25 497 (14.08%) | 11 192 (6.18%) | 181 132 | 6 058 426 | 2.99 |
| Autumn (Sep–Nov) | 80 945 (49.57%) | 37 976 (23.26%) | 10 283 (6.30%) | 23 285 (14.26%) | 10 793 (6.61%) | 163 282 | 5 769 136 | 2.83 |
| Winter (Dec–Feb) | 101 301 (43.71%) | 53 421 (23.05%) | 16 839 (7.26%) | 43 832 (18.91%) | 16 386 (7.07%) | 231 779 | 6 281 262 | 3.69 |
| Region | ||||||||
| Urban area | 345 282 (46.90%) | 170 032 (23.09%) | 49 157 (6.68%) | 121 816 (16.55%) | 49 968 (6.79%) | 736 255 | 22 520 715 | 3.27 |
| Rural area | 8127 (49.43%) | 3867 (23.52%) | 1693(10.30%) | 1268(7.71%) | 1485 (9.03%) | 16 440 | 1 638 600 | 1.00 |
| Total | 353 409 (46.95%) | 173 899 (23.10%) | 50 850 (6.76%) | 123 084 (16.35%) | 51 453 (6.84%) | 752 695 | 24 159 315 | 3.12 |
ILI%, the percentage of visits for ILI (total number of ILI cases/total number of visiting outpatients).
Indicated the constituent ratio of ILI by age group.
Demographic characteristics of the influenza-like illness (ILI) cases by the influenza sentinel surveillance system of Shenyang, 2010–2018
| Characteristic | Overall (%) | Urban (%) | Rural (%) | |
|---|---|---|---|---|
| Age, year | <0.001 | |||
| 0–4 | 353 409 (46.95%) | 345 282 (46.90%) | 8127 (49.43%) | |
| 5–14 | 173 899 (23.10%) | 170 032 (23.09%) | 3867 (23.52%) | |
| 15–24 | 50 850 (6.76%) | 49 157 (6.68%) | 1693 (10.30%) | |
| 25–59 | 123 084 (16.35%) | 121 816 (16.55%) | 1268 (7.71%) | |
| ≥60 | 51 453 (6.84%) | 49 968 (6.79%) | 1485 (9.03%) | |
| Seasons | <0.001 | |||
| Spring (Mar–May) | 176 502 (23.45%) | 172 351 (23.41%) | 4151 (25.25%) | |
| Summer (Jun–Aug) | 181 132 (24.07%) | 177 271 (24.08%) | 3861 (23.49%) | |
| Autumn (Sep–Nov) | 163 282 (21.69%) | 160 049 (21.74%) | 3233 (19.66%) | |
| Winter (Dec–Feb) | 231 779 (30.79%) | 226 584 (30.77%) | 5195 (31.60%) | |
| Total | 752 695 (100%) | 736 255 (97.82%) | 16 440 (2.18%) | |
Indicated the constituent ratio of ILI by age and season group.
Indicated the constituent ratio of ILI by region.
Number and rate of laboratory-confirmed influenza virus strain by season, during 2010–2018
| Seasons | Specimens | No. of positive | Positive rate (%) | Influenza A virus | Influenza B virus | Hybrid type | ||
|---|---|---|---|---|---|---|---|---|
| H1N1 | H3N2 | pdm H1N1 | ||||||
| Spring (Mar–May) | 3486 | 489 | 14.03 | 2 (0.41%) | 41 (8.38%) | 124 (25.36%) | 319 (65.24%) | 3 (0.61%) |
| Summer (Jun–Aug) | 1973 | 29 | 1.47 | 0 (0%) | 16 (55.17%) | 0 (0%) | 2 (6.90%) | 11 (37.93%) |
| Autumn (Sep–Nov) | 4870 | 115 | 2.36 | 0 (0%) | 68 (59.13%) | 21 (18.26%) | 12 (10.43%) | 14 (12.17%) |
| Winter (Dec–Feb) | 6910 | 1153 | 16.69 | 3 (0.26%) | 345 (29.92%) | 464 (40.24%) | 335 (29.05%) | 6 (0.52%) |
| Total | 17 239 | 1786 | 10.36 | 5 (0.28%) | 470 (26.32%) | 609 (34.10%) | 668 (37.40%) | 34 (1.90%) |
Indicated the constituent ratio of influenza virus.
Fig. 2.Monthly distribution of laboratory-confirmed influenza cases and ILI% of Shenyang during 2010–2018.
Fig. 3.The time series for monthly ILI% at non-seasonal difference and (or) seasonal difference during 2011–2018. (a) Original data of urban area; (b) data of urban area at first-order non-seasonal difference (d = 1) and first-order seasonal difference (D = 1); (c) original data of rural area; (d) data of rural area at d = 1 and D = 1.
Fig. 4.Auto-correlation function (ACF) and partial auto-correlation function (PACF) graphs of monthly ILI% at non-seasonal difference and (or) seasonal difference. (a) ACF and PACF graphs for urban area at d = 1, D = 1. (b) ACF and PACF graphs for rural area at d = 1, D = 1.
Goodness of statistics for SARIMA models
| Model | Goodness-of-fit statistics | Ljung–Box | |||||
|---|---|---|---|---|---|---|---|
| Stationary | RMSE | MAPE | BIC | Statistics | DF | ||
| SARIMA (0, 1, 0) (0, 1, 2)12 for urban area | 0.410 | 0.516 | 10.597 | −1.218 | 13.260 | 17 | 0.654 |
| SARIMA (1, 1, 1) (1, 1, 0)12 for rural area | 0.234 | 0.247 | 19.414 | −2.636 | 9.915 | 15 | 0.825 |
Stationary R2, the coefficient of determination; RMSE, root mean square error; MAPE, mean absolute percentage error; BIC, Bayesian Information Criterion.
Fig. 5.Time-series plots for predicted values of monthly ILI% by SARIMA model during 2011–2019. (a) Urban area. (b) Rural area. Dotted lines indicate the 95% confidence intervals (CIs) (UCL: upper limit of 95% CI; LCL: lower limit of 95% CI).