| Literature DB >> 32046680 |
Rui Huang1, Su-Rui Zhao1, Ya Li1, Fang Liu1, Yue Gong1, Jun Xing1, Ze-Sheng Xu2,3.
Abstract
BACKGROUND: The goal of this study was to review relevant case-control studies to determine the association of tumor necrosis factor-α (TNF-α) gene polymorphisms and coronary artery disease (CAD) susceptibility.Entities:
Keywords: Coronary artery disease; Gene polymorphisms; Meta-analysis; Tumor necrosis factor-α
Year: 2020 PMID: 32046680 PMCID: PMC7014948 DOI: 10.1186/s12881-020-0952-2
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Fig. 1Literature search and selection strategy
The basic characteristics description of included studies
| Study | Country | No. of patients | Age | Gender | Genetic testing method | Ethnicity | |||
|---|---|---|---|---|---|---|---|---|---|
| Case group | Control group | Case group | Control group | Case group | Control group | ||||
| S. M. Herrmann et al. 1998 a | Northern Ireland | 641 | 710 | – | – | – | – | Polymerase chain reaction-single-strand conformation polymorphism | European |
| S. M. Herrmann et al. 1998 b | France | 446 | 531 | – | – | – | – | Polymerase chain reaction-single-strand conformation polymorphism | European |
| Li Yan et al. 2004 | China | 210 | 186 | Polymerase chain reaction-single-strand conformation polymorphism | North Asian | ||||
| A.M. Bennet et al. 2006 | Sweden | 1213 | 1561 | 52~67 | 53~68 | 852 M | 1054 M | – | European |
| Liu Yan et al. 2011 | China | 438 | 330 | – | – | – | – | high resolution melting | North Asian |
| Zhang Lei et al. 2011 | China | 107 | 115 | – | – | – | – | high resolution melting | North Asian |
| Ho-Chan Cho et al. 2013 | South Korea | 197 | 404 | 61.4 | 62.01 | 130 M | 263 M | – | North Asian |
| Qi Xiaoming et al. 2014 | China | 207 | 274 | – | – | – | – | high resolution melting | North Asian |
| Liu Yan et al. 2009 | China | 286 | 202 | – | – | – | – | matrix assisted laser desorption ionization time | North Asian |
| Liang Hao et al. 2011 | China | 121 | 138 | – | – | 84 M | 92 M | Polymerase chain reaction-single-strand conformation polymorphism | North Asian |
| Xiang Xiaping et al. 2004 | China | 162 | 182 | – | – | – | – | Enzyme - linked immunosorbent assay with double antibody sandwich | North Asian |
| Li Yan et al. 2003 | China | 112 | 158 | – | – | – | – | – | North Asian |
| Sun Yujie et al. 2007 | China | 121 | 115 | 64.9 | 50.4 | 84 M | 74 M | Polymerase chain reaction-single-strand conformation polymorphism | North Asian |
| Pan Min et al. 2008 | China | 90 | 115 | 65.6 | 64.06 | 65 M | 70 M | Polymerase chain reaction-single-strand conformation polymorphism | North Asian |
| Zhao Xiaolei et al. 2015 | China | 783 | 749 | 64.82 | 59.74 | 497 M | 477 M | – | North Asian |
| Lakhdar Ghazouani et al. 2009 | Tunisia | 418 | 406 | 58.1 | 56.7 | 87F | 107F | – | African |
| Indranil Banerjee et al. 2007 | India | 210 | 232 | 59 | 56 | 166 M | 166 M | Polymerase chain reaction-single-strand conformation polymorphism | South Asian |
| Elena Sandoval-Pinto et al. 2016 | Mexico | 251 | 164 | 65 | 58 | 187 M | 71 M | Enzyme - linked immunosorbent assay with double antibody sandwich | North American |
| Yuting Cheng et al. 2015 | China | 247 | 304 | 61.13 | 61.31 | 120F | 152F | – | North Asian |
| I. SBARSI et al. 2007 | Italy | 248 | 241 | 61.8 | – | 197 M | – | Polymerase chain reaction-single-strand conformation polymorphism | European |
| Robertina Giacconi et al. 2006 | Italy | 105 | 190 | 71.9 | 76 | 72 M | 123 M | – | European |
| R. A. Allen et al. 2001 | UK | 180 | 250 | 59~63 | 37 | 117 M | 124 M | – | European |
| P. E. Morange et al. 2008 | Germany | 136 | 1264 | 67 | 61 | 100 M | 923 M | – | European |
| Liping Hou et al. 2009 | China | 804 | 905 | – | – | – | – | – | North Asian |
| Aparna A. Bhanushali et al. 2013 | India | 100 | 150 | 48 | 50 | 80 M | 70 M | – | South Asian |
| Gul Zareen Asifa et al. 2013 | Pakistan | 310 | 310 | 54.3 | 53.2 | – | – | – | South Asian |
F:female, M: male
Fig. 2Risk of bias by domain (in bold) and question in twenty-six case-control studies using the Newcastle–Ottawa Scale
Fig. 3Forest plot for the dominant model of TNF-α 308G/A polymorphisms associated with CAD
Fig. 4Funnel plot analysis of the included studies onTNF-α 308G/A polymorphisms
Meta-analysis of TNF-α 308G/A polymorphisms and CAD susceptibility
| Genetic Model | Subgroup analysis | N (case/control) | OR(95% CI) | P* | I2 | P# | P value | |
|---|---|---|---|---|---|---|---|---|
| Begg | Egger | |||||||
| AA vs GG + GA | ||||||||
| overall | 6522/8196 | 1.102 (0.886,1.370) | 0.209 | 22.0% | 0.383 | 0.322 | 0.106 | |
| European | 2472/4076 | 1.118 (0.810,1.544) | 0.087 | 45.7% | 0.496 | 0.881 | 0.102 | |
| North Asian | 3322/3332 | 1.135 (0.821,1.570) | 0.349 | 10.0% | 0.443 | 0.624 | 0.907 | |
| African | 418/406 | 0.705 (0.320,1.553) | – | – | 0.385 | – | – | |
| South Asian | 310/382 | 3.880 (0.401,37.525) | 0.894 | 0.0% | 0.242 | 0.317 | – | |
| HWE | 5814/7737 | 1.096 (0.835,1.438) | 0.210 | 23.1% | 0.510 | 0.329 | 0.042 | |
| NO HWE | 708/459 | 1.112 (0.773,1.601) | 0.127 | 57.1% | 0.567 | 0.317 | – | |
| AA+GA vs GG | ||||||||
| overall | 6522/8196 | 1.046(0.963,1.136) | 0.151 | 24.8% | 0.290 | 0.770 | 0.973 | |
| European | 2472/4076 | 1.008 (0.899,1.130) | 0.390 | 4.8% | 0.890 | 0.881 | 0.804 | |
| North Asian | 3322/3332 | 1.065 (0.927,1.222) | 0.143 | 33.1% | 0.374 | 0.128 | 0.138 | |
| African | 418/406 | 1.109 (0.833,1.476) | – | – | 0.478 | – | – | |
| South Asian | 310/382 | 1.352 (0.839,2.179) | 0.046 | 74.8% | 0.216 | 0.317 | – | |
| HWE | 5814/7737 | 1.033 (0.948,1.126) | 0.175 | 23.6% | 0.459 | 0.791 | 0.972 | |
| NO HWE | 708/459 | 1.219 (0.896,1.658) | 0.152 | 51.3% | 0.208 | 0.317 | – | |
| AA vs GG | ||||||||
| overall | 6522/8196 | 1.106 (0.888,1.377) | 0.226 | 20.5% | 0.367 | 0.373 | 0.132 | |
| European | 2472/4076 | 1.105 (0.798,1.530) | 0.118 | 41.0% | 0.548 | 0.453 | 0.097 | |
| North Asian | 3322/3332 | 1.147 (0.829,1.587) | 0.274 | 22.1% | 0.407 | 0.624 | 0.822 | |
| African | 418/406 | 0.739 (0.333,1.638) | – | – | 0.456 | – | – | |
| South Asian | 310/382 | 4.018 (0.415,38.903) | 0.869 | 0.0% | 0.230 | 0.317 | – | |
| HWE | 5814/7737 | 1.088 (0.828,1.431) | 0.234 | 20.8% | 0.545 | 0.329 | 0.048 | |
| NO HWE | 708/459 | 1.138 (0.790,1.641) | 0.121 | 58.5% | 0.488 | 0.317 | – | |
| GA vs GG | ||||||||
| overall | 6522/8196 | 1.037 (0.950,1.131) | 0.258 | 15.7% | 0.418 | 0.673 | 0.958 | |
| European | 2472/4076 | 0.999 (0.887,1.124) | 0.352 | 10.1% | 0.981 | 0.881 | 0.707 | |
| North Asian | 3322/3332 | 1.049 (0.903,1.218) | 0.288 | 16.9% | 0.531 | 0.531 | 0.398 | |
| African | 418/406 | 1.154 (0.859,1.549) | – | – | 0.179 | – | – | |
| South Asian | 310/382 | 1.281 (0.790,2.076) | 0.061 | 71.4% | 0.315 | 0.317 | – | |
| HWE | 5814/7737 | 1.027 (0.940,1.122) | 0.226 | 19.1% | 0.557 | 0.850 | 0.671 | |
| NO HWE | 708/459 | 1.389 (0.839,2.298) | 0.641 | 0.0% | 0.201 | 0.317 | – | |
| A vs G | ||||||||
| overall | 6522/8196 | 1.047 (0.973,1.126) | 0.065 | 34.7% | 0.222 | 0.721 | 0.673 | |
| European | 2472/4076 | 1.017 (0.920,1.124) | 0.303 | 16.6% | 0.741 | 0.453 | 0.312 | |
| North Asian | 3322/3332 | 1.071 (0.947,1.211) | 0.071 | 43.1% | 0.276 | 0.128 | 0.120 | |
| African | 418/406 | 1.043 (0.816,1.332) | – | – | 0.636 | – | – | |
| South Asian | 310/382 | 1.400 (0.887,2.210) | 0.037 | 77.0% | 0.149 | 0.317 | – | |
| HWE | 5814/7737 | 1.034 (0.957,1.116) | 0.122 | 28.9% | 0.399 | 0.850 | 0.628 | |
| NO HWE | 708/459 | 1.172 (0.927,1.481) | 0.039 | 76.6% | 0.185 | 0.317 | – | |
*P value of Heterogeneity chi-squared
#P value of Pooled statistic
Fig. 5Forest plot for the dominant model of TNF-α 238G/A polymorphisms associated with CAD
Meta-analysis of TNF-α 238G/A polymorphisms and CAD susceptibility
| Genetic Model | Subgroup analysis | N (case/control) | OR(95%CI) | P* | I2 | P# | P value | |
|---|---|---|---|---|---|---|---|---|
| Begg | Egger | |||||||
| AA vs GG + GA | ||||||||
| overall | 4827/6875 | 1.478 (0.821,2.662) | 0.624 | 0.0% | 0.193 | 0.161 | 0.034 | |
| European | 2108/3686 | 2.985 (1.121,7.946) | 0.691 | 0.0% | 0.209 | 0.624 | 0.902 | |
| North Asian | 2522/2785 | 0.947 (0.443,2.023) | 0.659 | 0.0% | 0.888 | 0.188 | 0.038 | |
| HWE | 3934/5941 | 2.832 (1.258,6.375) | 0.903 | 0.0% | 0.012 | 0.677 | 0.848 | |
| NO HWE | 696/530 | 0.602 (0.236,1.537) | 0.721 | 0.0% | 0.289 | 0.317 | – | |
| AA+GA vs GG | ||||||||
| overall | 4827/6875 | 1.072 (0.931,1.235) | 0.033 | 46.6% | 0.331 | 0.300 | 0.041 | |
| European | 2108/3686 | 0.929 (0.758,1.138) | 0.375 | 5.6% | 0.475 | 0.327 | 0.440 | |
| North Asian | 2522/2785 | 1.231 (1.010,1.500) | 0.044 | 51.5% | 0.040 | 0.621 | 0.148 | |
| HWE | 3934/5941 | 1.020 (0.879,1.184) | 0.052 | 45.0% | 0.791 | 0.186 | 0.110 | |
| NO HWE | 696/530 | 1.686 (1.060,2.681) | 0.586 | 0.0% | 0.027 | 0.317 | – | |
| AA vs GG | ||||||||
| overall | 4827/6875 | 1.506 (0.835,2.715) | 0.658 | 0.0% | 0.173 | 0.161 | 0.033 | |
| European | 2108/3686 | 2.961 (1.113,7.879) | 0.691 | 0.0% | 0.030 | 0.624 | 0.927 | |
| North Asian | 2522/2785 | 0.980 (0.458,2.097) | 0.680 | 0.0% | 0.958 | 0.188 | 0.037 | |
| HWE | 3934/5941 | 2.838 (1.260,6.394) | 0.934 | 0.0% | 0.012 | 0.677 | 0.893 | |
| NO HWE | 696/530 | 0.629 (0.246,1.608) | 0.705 | 0.0% | 0.333 | 0.317 | – | |
| GA vs GG | ||||||||
| overall | 4827/6875 | 1.165 (0.914,1.485) | 0.007 | 56.2% | 0.218 | 0.100 | 0.040 | |
| European | 2108/3686 | 0.890 (0.706,1.121) | 0.343 | 11.1% | 0.322 | 0.327 | 0.391 | |
| North Asian | 2522/2785 | 1.409 (0.981,2.024) | 0.014 | 60.2% | 0.063 | 0.805 | 0.160 | |
| HWE | 3934/5941 | 1.053 (0.837,1.325) | 0.039 | 47.6% | 0.659 | 0.186 | 0.156 | |
| NO HWE | 696/530 | 2.265 (1.307,3.926) | 0.651 | 0.0% | 0.004 | 0.317 | – | |
| A vs G | ||||||||
| overall | 4827/6875 | 1.088 (0.950,1.244) | 0.096 | 35.8% | 0.222 | 0.246 | 0.040 | |
| European | 2108/3686 | 0.979 (0.807,1.189) | 0.416 | 0.0% | 0.833 | 0.142 | 0.509 | |
| North Asian | 2522/2785 | 1.201 (0.995,1.450) | 0.084 | 44.1% | 0.057 | 0.805 | 0.117 | |
| HWE | 3934/5941 | 1.055 (0.914,1.217) | 0.077 | 40.7% | 0.465 | 0.243 | 0.087 | |
| NO HWE | 696/530 | 1.377 (0.918,2.065) | 0.538 | 0.0% | 0.122 | 0.317 | – | |
*P value of Heterogeneity chi-squared
#P value of Pooled statistic
Fig. 6Forest plot for the dominant model of TNF-α 857C/T polymorphisms associated with CAD
Meta-analysis of TNF-α 857C/T polymorphisms and CAD susceptibility
| Genetic Model | Subgroup analysis | N (case/control) | OR(95%CI) | P* | I2 | P# | P value | |
|---|---|---|---|---|---|---|---|---|
| Begg | Egger | |||||||
| TT vs CC + CT | ||||||||
| overall | 3494/5279 | 1.124 (0.836,1.510) | 0.437 | 0.0% | 0.440 | 1.000 | 0.769 | |
| European | 2139/3566 | 1.135 (0.753,1.710) | 0.752 | 0.0% | 0.546 | 0.624 | 0.577 | |
| North Asian | 1158/1309 | 1.112 (0.726,1.703) | 0.132 | 43.5% | 0.627 | 0.624 | 0.994 | |
| HWE | 1844/3078 | 1.230 (0.866,1.748) | 0.466 | 0.0% | 0.247 | 0.881 | 0.960 | |
| NO HWE | 1453/1797 | 0.901 (0.519,1.564) | 0.305 | 15.9% | 0.711 | 0.602 | 0.839 | |
| TT + CT vs CC | ||||||||
| overall | 3494/5279 | 0.920 (0.825,1.027) | 0.357 | 9.2% | 0.137 | 0.283 | 0.467 | |
| European | 2139/3566 | 0.978 (0.851,1.125) | 0.498 | 0.0% | 0.758 | 0.327 | 0.810 | |
| North Asian | 1158/1309 | 0.835 (0.701,0.996) | 0.327 | 13.7% | 0.045 | 0.624 | 0.992 | |
| HWE | 1844/3078 | 0.909 (0.793,1.041) | 0.230 | 26.1% | 0.167 | 0.881 | 0.641 | |
| NO HWE | 1453/1797 | 0.942 (0.784,1.132) | 0.428 | 0.0% | 0.524 | 0.117 | 0.006 | |
| TT vs CC | ||||||||
| overall | 3494/5279 | 1.105 (0.820,1.488) | 0.368 | 8.0% | 0.513 | 0.858 | 0.833 | |
| European | 2139/3566 | 1.140 (0.755,1.721) | 0.704 | 0.0% | 0.534 | 0.624 | 0.643 | |
| North Asian | 1158/1309 | 1.067 (0.693,1.644) | 0.109 | 47.1% | 0.767 | 0.624 | 0.972 | |
| HWE | 1844/3078 | 1.209 (0.848,1.724) | 0.383 | 5.8% | 0.295 | 0.881 | 0.996 | |
| NO HWE | 1453/1797 | 0.890 (0.511,1.547) | 0.291 | 19.1% | 0.679 | 0.602 | 0.872 | |
| CT vs CC | ||||||||
| overall | 3494/5279 | 0.904 (0.807,1.012) | 0.605 | 0.0% | 0.081 | 0.474 | 0.429 | |
| European | 2139/3566 | 0.966 (0.836,1.116) | 0.610 | 0.0% | 0.637 | 0.327 | 0.689 | |
| North Asian | 1158/1309 | 0.812 (0.676,0.976) | 0.649 | 0.0% | 0.026 | 1.000 | 0.695 | |
| HWE | 1844/3078 | 0.881 (0.765,1.015) | 0.466 | 0.0% | 0.080 | 0.652 | 0.632 | |
| NO HWE | 1453/1797 | 0.946 (0.782,1.145) | 0.513 | 0.0% | 0.569 | 0.602 | 0.247 | |
| T vs C | ||||||||
| overall | 3494/5279 | 0.949 (0.862,1.045) | 0.181 | 28.6% | 0.288 | 0.371 | 0.496 | |
| European | 2139/3566 | 0.994 (0.878,1.126) | 0.442 | 0.0% | 0.926 | 0.624 | 0.901 | |
| North Asian | 1158/1309 | 0.886 (0.762,1.032) | 0.108 | 47.2% | 0.119 | 1.000 | 0.718 | |
| HWE | 1844/3078 | 0.952 (0.846,1.071) | 0.109 | 42.2% | 0.416 | 0.652 | 0.796 | |
| NO HWE | 1453/1797 | 0.943 (0.798,1.114) | 0.330 | 9.7% | 0.490 | 0.117 | 0.223 | |
*P value of Heterogeneity chi-squared
#P value of Pooled statistic
Fig. 7Forest plot for the dominant model of TNF-α 863C/A polymorphisms associated with CAD
Meta-analysis of TNF-α 863C/A polymorphisms and CAD susceptibility
| Genetic Model | N (case/control) | OR(95%CI) | P* | I2 | P# | ||
|---|---|---|---|---|---|---|---|
| Begg | Egger | ||||||
| AA vs CC + CA | 3144/4491 | 0.828 (0.608,1.129) | 0.478 | 0.0% | 0.234 | 0.466 | 0.016 |
| AA+CA vs CC | 3144/4491 | 0.793 (0.512,1.227) | 0.000 | 93.3% | 0.298 | 0.020 | 0.390 |
| AA vs CC | 3144/4491 | 0.838 (0.612,1.145) | 0.450 | 0.0% | 0.267 | 0.348 | 0.035 |
| CA vs CC | 3144/4491 | 0.805 (0.513,1.265) | 0.000 | 93.3% | 0.347 | 0.032 | 0.426 |
| A vs C | 3144/4491 | 0.803 (0.584,1.103) | 0.000 | 90.6% | 0.176 | 0.012 | 0.204 |
*P value of Heterogeneity chi-squared
#P value of Pooled statistic
Fig. 8Forest plot for the dominant model of TNF-α 1031 T/C polymorphisms associated with CAD
Meta-analysis of TNF-α 1031 T/C polymorphisms and CAD susceptibility
| Genetic Model | N (case/control) | OR(95%CI) | P* | I2 | P# | ||
|---|---|---|---|---|---|---|---|
| Begg | Egger | ||||||
| CC vs TT + CT | 3781/3845 | 1.020 (0.677,1.539) | 0.013 | 58.6% | 0.923 | 0.602 | 0.458 |
| CC + CT vs TT | 3781/3845 | 0.945 (0.860,1.039) | 0.476 | 0.0% | 0.243 | 0.466 | 0.786 |
| CC vs TT | 3781/3845 | 0.999 (0.666,1.498) | 0.018 | 56.5% | 0.997 | 0.602 | 0.465 |
| CT vs TT | 3781/3845 | 0.929 (0.842,1.025) | 0.401 | 4.1% | 0.141 | 0.175 | 0.951 |
| C vs T | 3781/3845 | 0.973 (0.898,1.054) | 0.248 | 21.9% | 0.505 | 1.000 | 0.624 |
*P value of Heterogeneity chi-squared
#P value of Pooled statistic