| Literature DB >> 32042068 |
Elie Rassy1,2, Tarek Assi3, Nicholas Pavlidis4.
Abstract
Cancer of unknown primary (CUP) affects a small percentage of the general population. Nonetheless, a substantial number of these patients have a poor prognosis and consequently succumb to their illness within a year of diagnosis. The natural history of CUP is characterised by early metastasis from the unknown primary site, aggressive course and resistance to conventional chemotherapy. Unfortunately, the processes by which this orphan disease originates and progresses have not been fully elucidated and its biology remain unclear. Despite the conceptual progress in genetic and molecular profiling made over the past decade, recognition of the genetic and molecular abnormalities involved in CUP, as well as the identification of the tissue of origin remain unresolved issues. This review will outline the biology of CUP by exploring the hallmarks of cancer in order to rationalise the complexities of this enigmatic syndrome. This approach will help the reader to understand where research efforts currently stand and the pitfalls of this quest.Entities:
Mesh:
Year: 2020 PMID: 32042068 PMCID: PMC7156745 DOI: 10.1038/s41416-019-0723-z
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Overview of the CUP studies evaluating the accuracy of tissue-of-origin prediction with profiling and classical diagnostic methods.
| Study | Type of tissue analyzed/analyte | Profiling diagnostic methods | Tissue-of- origin prediction | Classical diagnostic methods | |
|---|---|---|---|---|---|
| Tothill et al.[ | 13 | FF/FFPE/RNA | GEP (microarray) | 84% | Clinicopathological features |
| Horlings et al.[ | 38 | FFPE/RNA | GEP (microarray) | 64–94% | Clinicopathological features |
| Bridgewater et al.[ | 21 | FFPE/RNA | GEP (microarray) | 67% | Clinicopathological features |
| Varadhachary et al.[ | 104 | FFPE/RNA | qRT-PCR | 61% | Clinicopathological features |
| Van Laar et al.[ | 13 | FF/FFPE/RNA | GEP (microarray) | 92% | Clinical features |
| Monzon et al.[ | 21 | FF/RNA | GEP (microarray) | 76% | Clinicopathological features |
| Ferracin et al.[ | 16 | FFPE/microRNA | 47-miRNA signatures | 75% | Conventional histology |
| Varadhachary et al.*[ | 87 | FFPE/microRNA | 48-miRNA signatures | 84% | Clinicopathological features |
| Thompson et al.[ | 171 | FFPE/NA | MTP (biotheranostics) | 84% | Conventional histology |
| Fernandez et al.[ | 42 | FF/DNA | Methylation array (1505 CpGs) | 78% | Clinicopathological features |
| Hainsworth et al.[ | 42 | FFPE/RNA | CancerTYPE ID (92-gene qRT PCR) | 54–86% | Clinicopathological features |
| Hainsworth et al.*[ | 252 | FFPE/RNA | CancerTYPE ID (92-gene qRT PCR) | 98% | Clinicopathological features |
| Greco et al.[ | 149 | FFPE/RNA | CancerTYPE ID (92-gene qRT PCR) | 70–77 | Clinicopathological features |
| Ades et al.*[ | 67 | FFPE/RNA | GEP (microarray) (CUPprint) | 82% | Clinicopathological features |
| Sanden et al.[ | 192 | FFPE/microRNA | 64 miR-based array | 86% | Clinicopathological features |
| Mileshkin et al.[ | 58 | FFPE/RNA | GEP (whole-genome expression) | 78% | Conventional histology |
| Tothill et al.[ | 49 | FFPE/RNA | GEP (microarray) | 77% | Conventional histology |
| Moran et al.[ | 216 | FFPE/DNA | DNA methylation microarray (EPICUP) | 87% | Clinicopathological features/autopsy |
| Raghav et al.[ | 1834 | FFPE/RNA | CancerTYPE ID (92-gene qRT PCR) | 94% | Clinicopathological features |
| Mileshkin et al.*[ | 124 | NA/RNA and DNA | 386-gene CCP/CUPguide | 86.6% | Clinicopathological features |
N number of patients with CUP, FF fresh frozen, FFPE formalin fixed paraffin embedded, NA not available.
All studies are retrospective except those marked with *.
Fig. 1The successive steps in the carcinogenesis of CUP.
Fig. 2Putative biological hallmarks in the pathogenesis of CUP.