Literature DB >> 32030360

Systems Modeling of Developmental Vascular Toxicity.

Katerine S Saili1, Jill A Franzosa1, Nancy C Baker1,2, Robert G Ellis-Hutchings3, Raja S Settivari3, Edward W Carney3, Richard Spencer4, Todd J Zurlinden1, Nicole C Kleinstreuer5, Shuaizhang Li6, Menghang Xia6, Thomas B Knudsen1.   

Abstract

The more than 80,000 chemicals in commerce present a challenge for hazard assessments that toxicity testing in the 21st century strives to address through high-throughput screening (HTS) assays. Assessing chemical effects on human development adds an additional layer of complexity to the screening, with a need to capture complex and dynamic events essential for proper embryo-fetal development. HTS data from ToxCast/Tox21 informs systems toxicology models, which incorporate molecular targets and biological pathways into mechanistic models describing the effects of chemicals on human cells, 3D organotypic culture models, and small model organisms. Adverse Outcome Pathways (AOPs) provide a useful framework for integrating the evidence derived from these in silico and in vitro systems to inform chemical hazard characterization. To illustrate this formulation, we have built an AOP for developmental toxicity through a mode of action linked to embryonic vascular disruption (Aop43). Here, we review the model for quantitative prediction of developmental vascular toxicity from ToxCast HTS data and compare the HTS results to functional vascular development assays in complex cell systems, virtual tissues, and small model organisms. ToxCast HTS predictions from several published and unpublished assays covering different aspects of the angiogenic cycle were generated for a test set of 38 chemicals representing a range of putative vascular disrupting compounds (pVDCs). Results boost confidence in the capacity to predict adverse developmental outcomes from HTS in vitro data and model computational dynamics for in silico reconstruction of developmental systems biology. Finally, we demonstrate the integration of the AOP and developmental systems toxicology to investigate the unique modes of action of two angiogenesis inhibitors.

Entities:  

Keywords:  5HPP-33; Adverse outcome pathway; TNP-470; Tox21; ToxCast; angiogenesis

Year:  2019        PMID: 32030360      PMCID: PMC7004230          DOI: 10.1016/j.cotox.2019.04.004

Source DB:  PubMed          Journal:  Curr Opin Toxicol        ISSN: 2468-2020


  50 in total

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Authors:  Marjorie A Peraza; Andrew D Burdick; Holly E Marin; Frank J Gonzalez; Jeffrey M Peters
Journal:  Toxicol Sci       Date:  2005-12-01       Impact factor: 4.849

2.  ToxCast Chemical Landscape: Paving the Road to 21st Century Toxicology.

Authors:  Ann M Richard; Richard S Judson; Keith A Houck; Christopher M Grulke; Patra Volarath; Inthirany Thillainadarajah; Chihae Yang; James Rathman; Matthew T Martin; John F Wambaugh; Thomas B Knudsen; Jayaram Kancherla; Kamel Mansouri; Grace Patlewicz; Antony J Williams; Stephen B Little; Kevin M Crofton; Russell S Thomas
Journal:  Chem Res Toxicol       Date:  2016-07-20       Impact factor: 3.739

3.  Central role of p53 on regulation of vascular permeability factor/vascular endothelial growth factor (VPF/VEGF) expression in mammary carcinoma.

Authors:  S Pal; K Datta; D Mukhopadhyay
Journal:  Cancer Res       Date:  2001-09-15       Impact factor: 12.701

4.  Activity profiles of 309 ToxCast™ chemicals evaluated across 292 biochemical targets.

Authors:  Thomas B Knudsen; Keith A Houck; Nisha S Sipes; Amar V Singh; Richard S Judson; Matthew T Martin; Arthur Weissman; Nicole C Kleinstreuer; Holly M Mortensen; David M Reif; James R Rabinowitz; R Woodrow Setzer; Ann M Richard; David J Dix; Robert J Kavlock
Journal:  Toxicology       Date:  2011-01-18       Impact factor: 4.221

5.  Identification of vascular disruptor compounds by analysis in zebrafish embryos and mouse embryonic endothelial cells.

Authors:  Catherine W McCollum; Javier Conde-Vancells; Charu Hans; Mercedes Vazquez-Chantada; Nicole Kleinstreuer; Tamara Tal; Thomas Knudsen; Shishir S Shah; Fatima A Merchant; Richard H Finnell; Jan-Åke Gustafsson; Robert Cabrera; Maria Bondesson
Journal:  Reprod Toxicol       Date:  2016-11-10       Impact factor: 3.143

6.  Failure of blood-island formation and vasculogenesis in Flk-1-deficient mice.

Authors:  F Shalaby; J Rossant; T P Yamaguchi; M Gertsenstein; X F Wu; M L Breitman; A C Schuh
Journal:  Nature       Date:  1995-07-06       Impact factor: 49.962

7.  Profiling the activity of environmental chemicals in prenatal developmental toxicity studies using the U.S. EPA's ToxRefDB.

Authors:  Thomas B Knudsen; Matthew T Martin; Robert J Kavlock; Richard S Judson; David J Dix; Amar V Singh
Journal:  Reprod Toxicol       Date:  2009-04-10       Impact factor: 3.143

8.  Abnormal blood vessel development and lethality in embryos lacking a single VEGF allele.

Authors:  P Carmeliet; V Ferreira; G Breier; S Pollefeyt; L Kieckens; M Gertsenstein; M Fahrig; A Vandenhoeck; K Harpal; C Eberhardt; C Declercq; J Pawling; L Moons; D Collen; W Risau; A Nagy
Journal:  Nature       Date:  1996-04-04       Impact factor: 49.962

9.  Environmental impact on vascular development predicted by high-throughput screening.

Authors:  Nicole C Kleinstreuer; Richard S Judson; David M Reif; Nisha S Sipes; Amar V Singh; Kelly J Chandler; Rob Dewoskin; David J Dix; Robert J Kavlock; Thomas B Knudsen
Journal:  Environ Health Perspect       Date:  2011-07-25       Impact factor: 9.031

10.  Three-dimensional analysis of vascular development in the mouse embryo.

Authors:  Johnathon R Walls; Leigh Coultas; Janet Rossant; R Mark Henkelman
Journal:  PLoS One       Date:  2008-08-06       Impact factor: 3.240

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  5 in total

1.  Bringing Big Data to Bear in Environmental Public Health: Challenges and Recommendations.

Authors:  Saskia Comess; Alexia Akbay; Melpomene Vasiliou; Ronald N Hines; Lucas Joppa; Vasilis Vasiliou; Nicole Kleinstreuer
Journal:  Front Artif Intell       Date:  2020-05-15

2.  Use of computational toxicology tools to predict in vivo endpoints associated with Mode of Action and the endocannabinoid system: A case study with chlorpyrifos, chlorpyrifos-oxon and Δ9Tetrahydrocannabinol.

Authors:  Marilyn Silva; Ryan Kin-Hin Kwok
Journal:  Curr Res Toxicol       Date:  2022-02-07

3.  Navigating the Minefield of Computational Toxicology and Informatics: Looking Back and Charting a New Horizon.

Authors:  Grace Patlewicz
Journal:  Front Toxicol       Date:  2020-06-25

Review 4.  Application of In Vitro Metabolism Activation in High-Throughput Screening.

Authors:  Masato Ooka; Caitlin Lynch; Menghang Xia
Journal:  Int J Mol Sci       Date:  2020-10-31       Impact factor: 5.923

5.  The liver, a functionalized vascular structure.

Authors:  Sylvie Lorente; Mathieu Hautefeuille; Aczel Sanchez-Cedillo
Journal:  Sci Rep       Date:  2020-10-01       Impact factor: 4.379

  5 in total

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