Literature DB >> 32026463

From random to regular: Variation in the patterning of retinal mosaics.

Patrick W Keeley1, Stephen J Eglen2, Benjamin E Reese1,3.   

Abstract

The various types of retinal neurons are each positioned at their respective depths within the retina where they are believed to be assembled as orderly mosaics, in which like-type neurons minimize proximity to one another. Two common statistical analyses for assessing the spatial properties of retinal mosaics include the nearest neighbor analysis, from which an index of their "regularity" is commonly calculated, and the density recovery profile derived from autocorrelation analysis, revealing the presence of an exclusion zone indicative of anti-clustering. While each of the spatial statistics derived from these analyses, the regularity index and the effective radius, can be useful in characterizing such properties of orderly retinal mosaics, they are rarely sufficient for conveying the natural variation in the self-spacing behavior of different types of retinal neurons and the extent to which that behavior generates uniform intercellular spacing across the mosaic. We consider the strengths and limitations of these and other spatial statistical analyses for assessing the patterning in retinal mosaics, highlighting a number of misconceptions and their frequent misuse. Rather than being diagnostic criteria for determining simply whether a population is "regular," they should be treated as descriptive statistics that convey variation in the factors that influence neuronal positioning. We subsequently apply multiple spatial statistics to the analysis of eight different mosaics in the mouse retina, demonstrating conspicuous variability in the degree of patterning present, from essentially random to notably regular. This variability in patterning has both a developmental as well as a functional significance, reflecting the rules governing the positioning of different types of neurons as the architecture of the retina is assembled, and the distinct mechanisms by which they regulate dendritic growth to generate their characteristic coverage and connectivity.
© 2020 Wiley Periodicals, Inc.

Entities:  

Keywords:  RRID AB_10013783; RRID AB_10064230; RRID AB_2079751; RRID AB_213554; RRID AB_2187701; RRID AB_309969; RRID AB_397958; RRID AB_90755; Voronoi domain; autocorrelation; density recovery profile; effective radius; nearest neighbor; packing factor; regularity index

Year:  2020        PMID: 32026463      PMCID: PMC7368823          DOI: 10.1002/cne.24880

Source DB:  PubMed          Journal:  J Comp Neurol        ISSN: 0021-9967            Impact factor:   3.215


  92 in total

1.  Evidence for spatial regularity among retinal ganglion cells that project to the accessory optic system in a frog, a reptile, a bird, and a mammal.

Authors:  J E Cook; T A Podugolnikova
Journal:  Vis Neurosci       Date:  2001 Mar-Apr       Impact factor: 3.241

2.  Random spatial patterning of cone bipolar cell mosaics in the mouse retina.

Authors:  Patrick W Keeley; Jason J Kim; Sammy C S Lee; Silke Haverkamp; Benjamin E Reese
Journal:  Vis Neurosci       Date:  2017-01       Impact factor: 3.241

3.  Morphology and topography of on- and off-alpha cells in the cat retina.

Authors:  H Wässle; L Peichl; B B Boycott
Journal:  Proc R Soc Lond B Biol Sci       Date:  1981-05-22

4.  Dendritic territories of cat retinal ganglion cells.

Authors:  H Wässle; L Peichl; B B Boycott
Journal:  Nature       Date:  1981-07-23       Impact factor: 49.962

5.  Analysis of two types of cone bipolar cells in the retina of a New World monkey, the marmoset, Callithrix jacchus.

Authors:  X Luo; K K Ghosh; P R Martin; U Grünert
Journal:  Vis Neurosci       Date:  1999 Jul-Aug       Impact factor: 3.241

6.  A new look at calretinin-immunoreactive amacrine cell types in the monkey retina.

Authors:  Helga Kolb; Li Zhang; Laura Dekorver; Nicolas Cuenca
Journal:  J Comp Neurol       Date:  2002-11-11       Impact factor: 3.215

7.  Genetic identification of an On-Off direction-selective retinal ganglion cell subtype reveals a layer-specific subcortical map of posterior motion.

Authors:  Andrew D Huberman; Wei Wei; Justin Elstrott; Ben K Stafford; Marla B Feller; Ben A Barres
Journal:  Neuron       Date:  2009-05-14       Impact factor: 17.173

8.  Sox2 regulates cholinergic amacrine cell positioning and dendritic stratification in the retina.

Authors:  Irene E Whitney; Patrick W Keeley; Ace J St John; Amanda G Kautzman; Jeremy N Kay; Benjamin E Reese
Journal:  J Neurosci       Date:  2014-07-23       Impact factor: 6.167

9.  Molecular identification of a retinal cell type that responds to upward motion.

Authors:  In-Jung Kim; Yifeng Zhang; Masahito Yamagata; Markus Meister; Joshua R Sanes
Journal:  Nature       Date:  2008-03-27       Impact factor: 49.962

Review 10.  Design principles and developmental mechanisms underlying retinal mosaics.

Authors:  Benjamin E Reese; Patrick W Keeley
Journal:  Biol Rev Camb Philos Soc       Date:  2014-08-08
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  14 in total

1.  Diversification of multipotential postmitotic mouse retinal ganglion cell precursors into discrete types.

Authors:  Karthik Shekhar; Irene E Whitney; Salwan Butrus; Yi-Rong Peng; Joshua R Sanes
Journal:  Elife       Date:  2022-02-22       Impact factor: 8.140

2.  An uncommon neuronal class conveys visual signals from rods and cones to retinal ganglion cells.

Authors:  Brent K Young; Charu Ramakrishnan; Tushar Ganjawala; Ping Wang; Karl Deisseroth; Ning Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-02       Impact factor: 11.205

3.  The mosaic of AII amacrine cell bodies in rat retina is indistinguishable from a random distribution.

Authors:  Jian Hao Liu; David Olukoya Peter; Maren Sofie Faldalen Guttormsen; Md Kaykobad Hossain; Yola Gerking; Margaret Lin Veruki; Espen Hartveit
Journal:  Vis Neurosci       Date:  2022-05-10       Impact factor: 1.895

4.  Photoreceptor distributions, visual pigments and the opsin repertoire of Atlantic halibut (Hippoglossus hippoglossus).

Authors:  Kennedy Bolstad; Iñigo Novales Flamarique
Journal:  Sci Rep       Date:  2022-05-16       Impact factor: 4.996

5.  Interrelationships between Cellular Density, Mosaic Patterning, and Dendritic Coverage of VGluT3 Amacrine Cells.

Authors:  Patrick W Keeley; Mikayla C Lebo; Jordan D Vieler; Jason J Kim; Ace J St John; Benjamin E Reese
Journal:  J Neurosci       Date:  2020-11-18       Impact factor: 6.167

Review 6.  The internal limiting membrane: Roles in retinal development and implications for emerging ocular therapies.

Authors:  Kevin Y Zhang; Thomas V Johnson
Journal:  Exp Eye Res       Date:  2021-03-20       Impact factor: 3.467

7.  OFF bipolar cell density varies by subtype, eccentricity, and along the dorsal ventral axis in the mouse retina.

Authors:  Michael J Camerino; Ian J Engerbretson; Parker A Fife; Nathan B Reynolds; Mikel H Berria; Jamie R Doyle; Mellisa R Clemons; Michael D Gencarella; Bart G Borghuis; Peter G Fuerst
Journal:  J Comp Neurol       Date:  2020-11-09       Impact factor: 3.028

8.  The cell adhesion molecule Sdk1 shapes assembly of a retinal circuit that detects localized edges.

Authors:  Pierre-Luc Rochon; Catherine Theriault; Aline Giselle Rangel Olguin; Arjun Krishnaswamy
Journal:  Elife       Date:  2021-09-21       Impact factor: 8.140

9.  Role of the Internal Limiting Membrane in Structural Engraftment and Topographic Spacing of Transplanted Human Stem Cell-Derived Retinal Ganglion Cells.

Authors:  Kevin Y Zhang; Caitlyn Tuffy; Joseph L Mertz; Sarah Quillen; Laurence Wechsler; Harry A Quigley; Donald J Zack; Thomas V Johnson
Journal:  Stem Cell Reports       Date:  2020-12-30       Impact factor: 7.765

10.  Gbx2 Identifies Two Amacrine Cell Subtypes with Distinct Molecular, Morphological, and Physiological Properties.

Authors:  Patrick C Kerstein; Joseph Leffler; Benjamin Sivyer; W Rowland Taylor; Kevin M Wright
Journal:  Cell Rep       Date:  2020-11-17       Impact factor: 9.423

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