Literature DB >> 32023555

Development of realistic multi-contrast textured XCAT (MT-XCAT) phantoms using a dual-discriminator conditional-generative adversarial network (D-CGAN).

Yushi Chang1, Kyle Lafata, William Paul Segars, Fang-Fang Yin, Lei Ren.   

Abstract

Develop a machine learning-based method to generate multi-contrast anatomical textures in the 4D extended cardiac-torso (XCAT) phantom for more realistic imaging simulations. As a pilot study, we synthesize CT and CBCT textures in the chest region. For training purposes, major organs and gross tumor volumes (GTVs) in chest region were segmented from real patient images and assigned to different HU values to generate organ maps, which resemble the XCAT images. A dual-discriminator conditional-generative adversarial network (D-CGAN) was developed to synthesize anatomical textures in the corresponding organ maps. The D-CGAN was uniquely designed with two discriminators, one trained for the body and the other for the tumor. Various XCAT phantoms were input to the D-CGAN to generate textured XCAT phantoms. The D-CGAN model was trained separately using 62 CT and 63 CBCT images from lung SBRT patients to generate multi-contrast textured XCAT (MT-XCAT). The MT-XCAT phantoms were evaluated by comparing the intensity histograms and radiomic features with those from real patient images using Wilcoxon rank-sum test. The visual examination demonstrated that the MT-XCAT phantoms presented similar general contrast and anatomical textures as CT and CBCT images. The mean HU of the MT-XCAT-CT and MT-XCAT-CBCT were [Formula: see text] and [Formula: see text], compared with that of real CT ([Formula: see text]) and CBCT ([Formula: see text]). The majority of radiomic features from the MT-XCAT phantoms followed the same distribution as the real images according to the Wilcoxon rank-sum test, except for limited second-order features. The study demonstrated the feasibility of generating realistic MT-XCAT phantoms using D-CGAN. The MT-XCAT phantoms can be further expanded to include other modalities (MRI, PET, ultrasound, etc) under the same scheme. This crucial development greatly enhances the value of the phantom for various clinical applications, including testing and optimizing novel imaging techniques, validation of radiomics analysis methods, and virtual clinical trials.

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Year:  2020        PMID: 32023555      PMCID: PMC7252912          DOI: 10.1088/1361-6560/ab7309

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  22 in total

1.  Modeling "Textured" Bones in Virtual Human Phantoms.

Authors:  Ehsan Abadi; William P Segars; Gregory M Sturgeon; Brian Harrawood; Anuj Kapadia; Ehsan Samei
Journal:  IEEE Trans Radiat Plasma Med Sci       Date:  2018-04-19

2.  Augmentation of CBCT Reconstructed From Under-Sampled Projections Using Deep Learning.

Authors:  Zhuoran Jiang; Yingxuan Chen; Yawei Zhang; Yun Ge; Fang-Fang Yin; Lei Ren
Journal:  IEEE Trans Med Imaging       Date:  2019-04-23       Impact factor: 10.048

3.  Predicting real-time 3D deformation field maps (DFM) based on volumetric cine MRI (VC-MRI) and artificial neural networks for on-board 4D target tracking: a feasibility study.

Authors:  Jonathan Pham; Wendy Harris; Wenzheng Sun; Zi Yang; Fang-Fang Yin; Lei Ren
Journal:  Phys Med Biol       Date:  2019-08-21       Impact factor: 3.609

4.  Image acquisition optimization of a limited-angle intrafraction verification (LIVE) system for lung radiotherapy.

Authors:  Yawei Zhang; Xinchen Deng; Fang-Fang Yin; Lei Ren
Journal:  Med Phys       Date:  2017-11-30       Impact factor: 4.071

5.  Realistic CT simulation using the 4D XCAT phantom.

Authors:  W P Segars; M Mahesh; T J Beck; E C Frey; B M W Tsui
Journal:  Med Phys       Date:  2008-08       Impact factor: 4.071

6.  MRI-based treatment planning for liver stereotactic body radiotherapy: validation of a deep learning-based synthetic CT generation method.

Authors:  Yingzi Liu; Yang Lei; Tonghe Wang; Oluwatosin Kayode; Sibo Tian; Tian Liu; Pretesh Patel; Walter J Curran; Lei Ren; Xiaofeng Yang
Journal:  Br J Radiol       Date:  2019-06-20       Impact factor: 3.039

7.  Assessment of concurrent stereotactic radiosurgery and bevacizumab treatment of recurrent malignant gliomas using multi-modality MRI imaging and radiomics analysis.

Authors:  Chunhao Wang; Wenzheng Sun; John Kirkpatrick; Zheng Chang; Fang-Fang Yin
Journal:  J Radiosurg SBRT       Date:  2018

8.  An Exploratory Radiomics Approach to Quantifying Pulmonary Function in CT Images.

Authors:  Kyle J Lafata; Zhennan Zhou; Jian-Guo Liu; Julian Hong; Chris R Kelsey; Fang-Fang Yin
Journal:  Sci Rep       Date:  2019-08-08       Impact factor: 4.379

9.  The development and validation of a CT-based radiomics signature for the preoperative discrimination of stage I-II and stage III-IV colorectal cancer.

Authors:  Cuishan Liang; Yanqi Huang; Lan He; Xin Chen; Zelan Ma; Di Dong; Jie Tian; Changhong Liang; Zaiyi Liu
Journal:  Oncotarget       Date:  2016-05-24

10.  Radiomics versus Visual and Histogram-based Assessment to Identify Atheromatous Lesions at Coronary CT Angiography: An ex Vivo Study.

Authors:  Márton Kolossváry; Júlia Karády; Yasuka Kikuchi; Alexander Ivanov; Christopher L Schlett; Michael T Lu; Borek Foldyna; Béla Merkely; Hugo J Aerts; Udo Hoffmann; Pál Maurovich-Horvat
Journal:  Radiology       Date:  2019-08-06       Impact factor: 11.105

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  3 in total

1.  Automatic detection of pulmonary nodules on CT images with YOLOv3: development and evaluation using simulated and patient data.

Authors:  Chenyang Liu; Shen-Chiang Hu; Chunhao Wang; Kyle Lafata; Fang-Fang Yin
Journal:  Quant Imaging Med Surg       Date:  2020-10

Review 2.  Virtual clinical trials in medical imaging: a review.

Authors:  Ehsan Abadi; William P Segars; Benjamin M W Tsui; Paul E Kinahan; Nick Bottenus; Alejandro F Frangi; Andrew Maidment; Joseph Lo; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2020-04-11

3.  Photon Counting CT and Radiomic Analysis Enables Differentiation of Tumors Based on Lymphocyte Burden.

Authors:  Alex J Allphin; Yvonne M Mowery; Kyle J Lafata; Darin P Clark; Alex M Bassil; Rico Castillo; Diana Odhiambo; Matthew D Holbrook; Ketan B Ghaghada; Cristian T Badea
Journal:  Tomography       Date:  2022-03-10
  3 in total

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