Literature DB >> 32023463

Oct4-Mediated Inhibition of Lsd1 Activity Promotes the Active and Primed State of Pluripotency Enhancers.

Lama AlAbdi1, Debapriya Saha1, Ming He1, Mohd Saleem Dar1, Sagar M Utturkar2, Putu Ayu Sudyanti3, Stephen McCune1, Brice H Spears1, James A Breedlove1, Nadia A Lanman4, Humaira Gowher5.   

Abstract

An aberrant increase in pluripotency gene (PpG) expression due to enhancer reactivation could induce stemness and enhance the tumorigenicity of cancer stem cells. Silencing of PpG enhancers (PpGe) during embryonic stem cell differentiation involves Lsd1-mediated H3K4me1 demethylation and DNA methylation. Here, we observed retention of H3K4me1 and DNA hypomethylation at PpGe associated with a partial repression of PpGs in F9 embryonal carcinoma cells (ECCs) post-differentiation. H3K4me1 demethylation in F9 ECCs could not be rescued by Lsd1 overexpression. Given our observation that H3K4me1 demethylation is accompanied by strong Oct4 repression in P19 ECCs, we tested if Oct4 interaction with Lsd1 affects its catalytic activity. Our data show a dose-dependent inhibition of Lsd1 activity by Oct4 and retention of H3K4me1 at PpGe in Oct4-overexpressing P19 ECCs. These data suggest that Lsd1-Oct4 interaction in cancer stem cells could establish a "primed" enhancer state that is susceptible to reactivation, leading to aberrant PpG expression.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DNA methylation; Dnmt3a; Lsd1; Oct4; cancer stem cells; embryonal carcinoma cells; enhancer priming; enhancers; histone demethylation; pluripotency

Year:  2020        PMID: 32023463      PMCID: PMC7316367          DOI: 10.1016/j.celrep.2019.11.040

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  113 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-20       Impact factor: 11.205

Review 2.  Functional and mechanistic diversity of distal transcription enhancers.

Authors:  Michael Bulger; Mark Groudine
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Review 3.  Enhancer function: new insights into the regulation of tissue-specific gene expression.

Authors:  Chin-Tong Ong; Victor G Corces
Journal:  Nat Rev Genet       Date:  2011-03-01       Impact factor: 53.242

4.  Dual roles of Oct4 in the maintenance of mouse P19 embryonal carcinoma cells: as negative regulator of Wnt/β-catenin signaling and competence provider for Brachyury induction.

Authors:  Yusuke Marikawa; Dana Ann A Tamashiro; Toko C Fujita; Vernadeth B Alarcon
Journal:  Stem Cells Dev       Date:  2011-01-08       Impact factor: 3.272

5.  LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription.

Authors:  Eric Metzger; Melanie Wissmann; Na Yin; Judith M Müller; Robert Schneider; Antoine H F M Peters; Thomas Günther; Reinhard Buettner; Roland Schüle
Journal:  Nature       Date:  2005-08-03       Impact factor: 49.962

6.  BEDTools: a flexible suite of utilities for comparing genomic features.

Authors:  Aaron R Quinlan; Ira M Hall
Journal:  Bioinformatics       Date:  2010-01-28       Impact factor: 6.937

7.  Molecular mimicry and ligand recognition in binding and catalysis by the histone demethylase LSD1-CoREST complex.

Authors:  Riccardo Baron; Claudia Binda; Marcello Tortorici; J Andrew McCammon; Andrea Mattevi
Journal:  Structure       Date:  2011-02-09       Impact factor: 5.006

8.  An Mll4/COMPASS-Lsd1 epigenetic axis governs enhancer function and pluripotency transition in embryonic stem cells.

Authors:  Kaixiang Cao; Clayton K Collings; Marc A Morgan; Stacy A Marshall; Emily J Rendleman; Patrick A Ozark; Edwin R Smith; Ali Shilatifard
Journal:  Sci Adv       Date:  2018-01-31       Impact factor: 14.136

9.  Tumorigenic and Differentiation Potentials of Embryonic Stem Cells Depend on TGFβ Family Signaling: Lessons from Teratocarcinoma Cells Stimulated to Differentiate with Retinoic Acid.

Authors:  Olga Gordeeva; Sergey Khaydukov
Journal:  Stem Cells Int       Date:  2017-07-16       Impact factor: 5.443

10.  OCT4 promotes tumorigenesis and inhibits apoptosis of cervical cancer cells by miR-125b/BAK1 pathway.

Authors:  Y-D Wang; N Cai; X-L Wu; H-Z Cao; L-L Xie; P-S Zheng
Journal:  Cell Death Dis       Date:  2013-08-08       Impact factor: 8.469

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  8 in total

1.  LSD1-mediated demethylation of OCT4 safeguards pluripotent stem cells by maintaining the transcription of PORE-motif-containing genes.

Authors:  Songsong Dan; Yuelin Song; Xiaotao Duan; Xiao Pan; Cheng Chen; Shiqi She; Tong Su; Jingchao Li; Xinyu Chen; Yanwen Zhou; Wenjie Chen; Xiaobing Zhang; Xiaoyun Pan; Ying-Jie Wang; Bo Kang
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

Review 2.  Roles of lysine-specific demethylase 1 (LSD1) in homeostasis and diseases.

Authors:  Dongha Kim; Keun Il Kim; Sung Hee Baek
Journal:  J Biomed Sci       Date:  2021-06-04       Impact factor: 8.410

3.  GATA6 defines endoderm fate by controlling chromatin accessibility during differentiation of human-induced pluripotent stem cells.

Authors:  James A Heslop; Behshad Pournasr; Jui-Tung Liu; Stephen A Duncan
Journal:  Cell Rep       Date:  2021-05-18       Impact factor: 9.423

4.  Simplified MethylRAD Sequencing to Detect Changes in DNA Methylation at Enhancer Elements in Differentiating Embryonic Stem Cells.

Authors:  Debapriya Saha; Allison B Norvil; Nadia A Lanman; Humaira Gowher
Journal:  Epigenomes       Date:  2020-10-01

5.  Misregulation of the expression and activity of DNA methyltransferases in cancer.

Authors:  Isaiah K Mensah; Allison B Norvil; Lama AlAbdi; Sarah McGovern; Christopher J Petell; Ming He; Humaira Gowher
Journal:  NAR Cancer       Date:  2021-12-01

Review 6.  LSD1: Expanding Functions in Stem Cells and Differentiation.

Authors:  Carlos Martinez-Gamero; Sandhya Malla; Francesca Aguilo
Journal:  Cells       Date:  2021-11-20       Impact factor: 6.600

7.  Integrative analysis reveals histone demethylase LSD1 promotes RNA polymerase II pausing.

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8.  KDM1A maintains genome-wide homeostasis of transcriptional enhancers.

Authors:  Saurabh Agarwal; Katherine M Bonefas; Patricia M Garay; Emily Brookes; Yumie Murata-Nakamura; Robert S Porter; Todd S Macfarlan; Bing Ren; Shigeki Iwase
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  8 in total

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