| Literature DB >> 32021204 |
Chao Liu1, Sijia Song2, Junkai Zhang1, Xiao Li1, Huijie Gao1.
Abstract
PURPOSE: Several lines of evidence support the fact that the presence of oxidative stress plays an important role in the pathophysiological mechanisms of schizophrenia (SCZ). The glutathione peroxidases (GPXs) and glutathione S-transferases (GSTs) are the major antioxidant enzymes. Polymorphic variants of GPX and GST can affect the antioxidant activities of their encoded enzymes. This study explored the possible associations of the GSTA1 and GPX3 gene polymorphisms and schizophrenia in Chinese Han population.Entities:
Keywords: gene polymorphism; glutathione S-transferase; glutathione peroxidase; oxidative stress; schizophrenia
Year: 2020 PMID: 32021204 PMCID: PMC6957098 DOI: 10.2147/NDT.S236298
Source DB: PubMed Journal: Neuropsychiatr Dis Treat ISSN: 1176-6328 Impact factor: 2.570
The Information of Primer of GPX3 rs736775 and GSTA1 rs3957357 Polymorphism
| Primer Name | Sequence (5ʹ-3ʹ) | PCR Length |
|---|---|---|
| rs736775 | F:TAAACCCAAGTCCCCTGAGT | 96bp |
| rs3957357 | F:ACAACTGAATTCCAGGTCCTAATG | 114bp |
The Information of Probe of GPX3 rs736775 and GSTA1 rs3957357 Polymorphism
| Probe Name | Sequence (5ʹ-3ʹ) | LDR Length |
|---|---|---|
| Rs736775_modify | P- TGCCCTACCCTCAGGGAGGCCTGAC-FAM | |
| rs736775_C | CCTAGGCTCCTTCCACTGCCCCGGC | 50 |
| rs736775_T | CTGCCTAGGCTCCTTCCACTGCCCCGGT | 53 |
| Rs3957357_modify | P- GTCAAGTTAGGGAAAAGCCCTGACTGAC -FAM | |
| rs3957357_A | CTGAATAGTTCTCTCCCACTGAAAGAAGA | 57 |
| rs3957357_G | CTGACTGATAGTTCTCTCCCACTGAAAGAAGG | 60 |
The Comparison of Genotypic and Allelic Frequencies Between SCZ and Control Groups
| SNP | Allelic Test | Genotypic Test | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Allele | SCZ/Control | P | χ2 | OR(95% CI) | Genotype | SCZ/Control | P | χ2 | |
| rs3957357 | G | 1050/1145 | 0.016 | 5.847 | 1.329 | GG | 442/503 | 0.046 | 6.172 |
| A | 184/151 | AG | 166/139 | ||||||
| AA | 9/6 | ||||||||
| rs736775 | T | 857/933 | 0.173 | 1.853 | 1.131 | TT | 292/331 | 0.357 | 2.058 |
| C | 377/363 | CT | 273/271 | ||||||
| CC | 52/46 | ||||||||
Analysis of the Two SNPs Based on Three Genetic Models
| SNP | Genotype | SCZ/Control | Additive Model | Dominant Model | Recessive Model | |||
|---|---|---|---|---|---|---|---|---|
| P | OR(95% CI) | P | OR(95% CI) | P | OR(95% CI) | |||
| rs3957357 | GG | 442/503 | 0.31 | 0.59 (0.21–1.66) | 0.01 | 0.73 (0.56–0.94) | 0.38 | 0.63 (0.22–1.78) |
| AG | 166/139 | |||||||
| AA | 9/6 | |||||||
| rs736775 | TT | 292/331 | 0.25 | 0.78 | 0.18 | 0.86 (0.69–1.07) | 0.38 | 0.83 (0.55–1.26) |
| CT | 273/271 | |||||||
| CC | 52/46 | |||||||