Literature DB >> 32019865

Rational design, synthesis, and evaluation of uncharged, "smart" bis-oxime antidotes of organophosphate-inhibited human acetylcholinesterase.

Lukas Gorecki1, Oksana Gerlits2, Xiaotian Kong3, Xiaolin Cheng3, Donald K Blumenthal4, Palmer Taylor1, Carlo Ballatore1, Andrey Kovalevsky5, Zoran Radić6.   

Abstract

Organophosphate (OP) intoxications from nerve agent and OP pesticide exposures are managed with pyridinium aldoxime-based therapies whose success rates are currently limited. The pyridinium cation hampers uptake of OPs into the central nervous system (CNS). Furthermore, it frequently binds to aromatic residues of OP-inhibited acetylcholinesterase (AChE) in orientations that are nonproductive for AChE reactivation, and the structural diversity of OPs impedes efficient reactivation. Improvements of OP antidotes need to include much better access of AChE reactivators to the CNS and optimized orientation of the antidotes' nucleophile within the AChE active-center gorge. On the basis of X-ray structures of a CNS-penetrating reactivator, monoxime RS194B, reversibly bound to native and venomous agent X (VX)-inhibited human AChE, here we created seven uncharged acetamido bis-oximes as candidate antidotes. Both oxime groups in these bis-oximes were attached to the same central, saturated heterocyclic core. Diverse protonation of the heterocyclic amines and oxime groups of the bis-oximes resulted in equilibration among up to 16 distinct ionization forms, including uncharged forms capable of diffusing into the CNS and multiple zwitterionic forms optimal for reactivation reactions. Conformationally diverse zwitterions that could act as structural antidote variants significantly improved in vitro reactivation of diverse OP-human AChE conjugates. Oxime group reorientation of one of the bis-oximes, forcing it to point into the active center for reactivation, was confirmed by X-ray structural analysis. Our findings provide detailed structure-activity properties of several CNS-directed, uncharged aliphatic bis-oximes holding promise for use as protonation-dependent, conformationally adaptive, "smart" accelerated antidotes against OP toxicity.

Entities:  

Keywords:  acetylcholinesterase (AChE); aliphatic bis-oxime; crystal structure; drug design; enzyme structure; molecular modeling; organophosphate intoxication; oxime reactivation; structure-function; uncharged oxime antidote

Year:  2020        PMID: 32019865      PMCID: PMC7105318          DOI: 10.1074/jbc.RA119.012400

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

1.  HKL-3000: the integration of data reduction and structure solution--from diffraction images to an initial model in minutes.

Authors:  Wladek Minor; Marcin Cymborowski; Zbyszek Otwinowski; Maksymilian Chruszcz
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-07-18

2.  A new crystal form of human acetylcholinesterase for exploratory room-temperature crystallography studies.

Authors:  Oksana Gerlits; Kwok-Yiu Ho; Xiaolin Cheng; Donald Blumenthal; Palmer Taylor; Andrey Kovalevsky; Zoran Radić
Journal:  Chem Biol Interact       Date:  2019-06-07       Impact factor: 5.192

Review 3.  Assessment of ionizable, zwitterionic oximes as reactivating antidotal agents for organophosphate exposure.

Authors:  Palmer Taylor; Shyong Yan-Jye; Jeremiah Momper; William Hou; Gisela Andrea Camacho-Hernandez; Zoran Radic'; Yvonne Rosenberg; Zrinka Kovarik; Rakesh Sit; K Barry Sharpless
Journal:  Chem Biol Interact       Date:  2019-05-14       Impact factor: 5.192

4.  Nonquaternary reactivators for organophosphate-inhibited cholinesterases.

Authors:  Jarosław Kalisiak; Erik C Ralph; John R Cashman
Journal:  J Med Chem       Date:  2011-12-29       Impact factor: 7.446

5.  Post-exposure treatment with the oxime RS194B rapidly reverses early and advanced symptoms in macaques exposed to sarin vapor.

Authors:  Yvonne J Rosenberg; Lingjun Mao; Xiaoming Jiang; Jonathan Lees; Limin Zhang; Zoran Radic; Palmer Taylor
Journal:  Chem Biol Interact       Date:  2017-07-08       Impact factor: 5.192

6.  Rational design of alkylene-linked bis-pyridiniumaldoximes as improved acetylcholinesterase reactivators.

Authors:  Yuan-Ping Pang; Thomas M Kollmeyer; Feng Hong; Jong-Cheol Lee; Pamela I Hammond; Sharie P Haugabouk; Stephen Brimijoin
Journal:  Chem Biol       Date:  2003-06

7.  Structures of paraoxon-inhibited human acetylcholinesterase reveal perturbations of the acyl loop and the dimer interface.

Authors:  Matthew C Franklin; Michael J Rudolph; Christopher Ginter; Michael S Cassidy; Jonah Cheung
Journal:  Proteins       Date:  2016-06-03

8.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  Characterization of asymmetric fluorogenic phosphonates as probes for developing organophosphorus hydrolases with broader stereoselectivity.

Authors:  G Amitai; R Adani; O Limanovich; S Teitlboim; S Yishay; L Tveria; G Yacov; H Meshulam; L Raveh
Journal:  Chem Biol Interact       Date:  2008-06-06       Impact factor: 5.192

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

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  4 in total

1.  Dual acting oximes designed for therapeutic decontamination of reactive organophosphates via catalytic inactivation and acetylcholinesterase reactivation.

Authors:  Jayme Cannon; Shengzhuang Tang; Kelly Yang; Racquel Harrison; Seok Ki Choi
Journal:  RSC Med Chem       Date:  2021-08-04

2.  A Thermophilic Bacterial Esterase for Scavenging Nerve Agents: A Kinetic, Biophysical and Structural Study.

Authors:  Janek Bzdrenga; Elodie Trenet; Fabien Chantegreil; Kevin Bernal; Florian Nachon; Xavier Brazzolotto
Journal:  Molecules       Date:  2021-01-27       Impact factor: 4.411

3.  Development of a CNS-permeable reactivator for nerve agent exposure: an iterative, multi-disciplinary approach.

Authors:  Brian J Bennion; Michael A Malfatti; Nicholas A Be; Heather A Enright; Saphon Hok; C Linn Cadieux; Timothy S Carpenter; Victoria Lao; Edward A Kuhn; M Windy McNerney; Felice C Lightstone; Tuan H Nguyen; Carlos A Valdez
Journal:  Sci Rep       Date:  2021-07-30       Impact factor: 4.996

4.  Assessment of four organophosphorus pesticides as inhibitors of human acetylcholinesterase and butyrylcholinesterase.

Authors:  Tena Čadež; Dora Kolić; Goran Šinko; Zrinka Kovarik
Journal:  Sci Rep       Date:  2021-11-02       Impact factor: 4.379

  4 in total

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