Literature DB >> 32015335

Radical-mediated C-C cleavage of unstrained cycloketones and DFT study for unusual regioselectivity.

Mingyang Wang1, Man Li2, Shan Yang1, Xiao-Song Xue3, Xinxin Wu1, Chen Zhu4.   

Abstract

The C-C σ-bond activation of unstrained cycloketones represents an ingenious and advanced technique in synthetic chemistry, but it remains a challenging area which has been largely underexplored. Herein we report an efficient strategy for the direct C-C cleavage of cyclohexanones and cyclopentanones. The cyclic C-C σ-bond is readily cleaved under mild conditions with the aid of an in situ formed side-chain aryl radical. Density functional theory calculations are carried out to shed light on the unusual regioselectivity of C-C bond cleavage. The reaction affords a variety of structurally diverse 3-coumaranones and indanones that widely exist in natural products and bioactive molecules, illustrating the synthetic value of this method.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32015335      PMCID: PMC6997357          DOI: 10.1038/s41467-020-14435-5

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


Introduction

The C–C σ-bond is ubiquitous that constitutes the framework of organic compounds; therefore, the direct elaboration of C–C σ-bond into other valuable chemical bonds represents an ideal, atom- and step-economic synthetic tactic[1-9]. However, C–C σ-bonds usually remain inert in the transition metal-catalyzed reactions attributed to the poor interaction between the catalytic metal center and the C–C σ-orbital induced by the steric congestion and highly oriented nature of C–C σ-bonds[10]. Taking advantage of ring-strain relief, over the past few decades, small-sized rings such as cyclopropane and cyclobutane derivatives have served as privileged precursors in the transition metal-catalyzed C–C activation[11-20]. This feature has also been applied to the alkoxy-radical-promoted β–C–C bond scission that offers an efficient pathway to cleave the cyclic C–C σ-bonds of cyclopropanols and cyclobutanols[21-27]. In contrast, the C–C activation of unstrained cyclic skeletons, particularly five- and six-membered rings, is still confronted with a formidable challenge[28-31]. As fundamental structural units, cyclohexanone and cyclopentanone are readily available in numerous natural products and fine chemicals. With the exception of classic ring-expansion reactions such as the Bayer−Villiger oxidation and Schmidt reaction, however, the C–C activation of cyclohexanone and cyclopentanone has been rarely explored due to the significantly decreased ring-strain energy and remarkable stability (Fig. 1a)[32]. Recently, Dong et al. developed an elegant strategy based on the installation of temporary directing group to activate the C–C bond of cyclopentanones through transition metal-catalysis (Fig. 1b)[33-35]. But the strategy was less efficient for C–C activation of the relatively more stable cyclohexanones. Herein, we disclose an efficient strategy for the direct C–C cleavage of unstrained cycloketones. With the assistance of the side-chain aryl radical, both cyclohexanones and cyclopentanones are readily cleaved, leading to a variety of structurally diverse 3-coumaranones and indanones (Fig. 1c). Notably, these structural motifs are widely found in natural products and pharmaceuticals, manifesting the synthetic value of this protocol (Fig. 1d). Mechanistically, the cleavage of C–C σ-bond via path b to form the primary alkyl radical (Int. b) is unusual[36,37], as the generation of ring-expansion Int. a via path a is supposed to be more favored due to the thermodynamically stability of secondary alkyl radical and p-π conjugate effect provided by the adjacent oxygen atom according to the Dowd−Beckwith ring-expansion reaction[38-47]. Thus, density functional theory (DFT) as well as experimental studies have been sought to address the perplexing regioselectivity of C–C bond cleavage.
Fig. 1

Challenge and synthetic value for C–C cleavage of cyclohexanone and cyclopentanone.

a Ring strain energy. b Activation of cyclopentanone by temporary directing mode by Dong et al. c Aryl radical-promoted activation of both cyclohexanone and cyclopentanone. d Natural products and drugs containing 3-coumaranone and indane.

Challenge and synthetic value for C–C cleavage of cyclohexanone and cyclopentanone.

a Ring strain energy. b Activation of cyclopentanone by temporary directing mode by Dong et al. c Aryl radical-promoted activation of both cyclohexanone and cyclopentanone. d Natural products and drugs containing 3-coumaranone and indane.

Results

Reaction parameters survey

The project commenced with an extensive survey of reaction parameters for the C–C activation of 2-(2-iodophenoxy) cyclohexanone 1a under radical conditions (Table 1). It was found that with PhCF3 as solvent the combination of AIBN and TTMSS could abstract the iodine atom to generate aryl radical that triggered the subsequent C–C cleavage, affording 3-coumaranone 2a in modest yield (Table 1, entry 1). An alternative pathway, the addition of aryl radical to cyclohexanone followed by dehydration, led to the benzofuran 2a′ that was identified as main byproduct in the reaction. While assessing the effect of base, it was surprising that the hydrated K2HPO4 delivered a good yield (Table 1, entry 2), whereas the anhydrous one as well as other bases only afforded a trace amount of products (Table 1, entries 3–4). This prompted us to turn our attention to examining the influence of water (Table 1, entries 5–7). Indeed, the addition of 20 equiv. of water increased the yield to 85% (Table 1, entry 6). Solvent screening revealed that PhCF3 was more efficient than other solvents (Table 1, entries 8–12). Reducing the loading of AIBN to 5 mol % resulted in a similarly high yield (Table 1, entry 13). Notably, the reaction could be carried out under air without the use of AIBN, leading to a synthetically useful yield (Table 1, entry 14). Decrease of reaction temperature compromised the reaction outcome (Table 1, entry 15). Reducing the concentration also decreased the reaction yield (Table 1, entry 16). Although using Bu3SnH instead of TTMSS also led to good yield (Table 1, entry 17, with 20 mol % of AIBN; Table 1, entry 18, with 5 mol % of AIBN), the use of less toxic silane is still preferred in the reaction.
Table 1

Reaction parameters survey.

EntryaAdditiveSolventYield of 2a (%)b
1NonePhCF366
2K2HPO4·3H2O (1 equiv.)PhCF376
3K2HPO4 (1 equiv.)PhCF3<10
4K2CO3 or K3PO4 (1 equiv.)PhCF3<10
5H2O (3 equiv.)PhCF377
6H2O (20 equiv.)PhCF385
7H2O (100 equiv.)PhCF375
8H2O (20 equiv.)DMF25
9H2O (20 equiv.)DMSO16
10H2O (20 equiv.)THF26
11H2O (20 equiv.)DCE61
12H2O (20 equiv.)Dioxane65
13cH2O (20 equiv.)PhCF384
14dH2O (20 equiv.)PhCF366
15c,eH2O (20 equiv.)PhCF374
16c,fH2O (20 equiv.)PhCF356
17gNonePhCF378
18c,gNonePhCF331

Reaction conditions: 1a (0.2 mmol), TTMSS (0.3 mmol, 1.5 equiv.), AIBN (0.04 mmol, 20 mol %), and additive in solvent (2 mL) at 80 °C.

bYield of isolated product.

cAIBN (0.01 mmol, 5 mol %).

dUse of air instead of AIBN.

e70 °C.

fPhCF3 (4 mL).

gBu3SnH instead of TTMSS.

Reaction parameters survey. Reaction conditions: 1a (0.2 mmol), TTMSS (0.3 mmol, 1.5 equiv.), AIBN (0.04 mmol, 20 mol %), and additive in solvent (2 mL) at 80 °C. bYield of isolated product. cAIBN (0.01 mmol, 5 mol %). dUse of air instead of AIBN. e70 °C. fPhCF3 (4 mL). gBu3SnH instead of TTMSS.

Scope of substrates

With the optimized reaction conditions in hand, we set about evaluating the generality of the protocol (Fig. 2). A variety of 2-substituted cyclohexanones (1b–1z) were firstly examined. All the reactions were readily accomplished through the regiospecific cyclic C–C σ-bond scission and subsequent C–C bond formation within a few hours. Both electron-rich and -deficient aryl substituents were well tolerated in the reaction, affording the corresponding 3-coumaranones 2. Under the identical conditions, the naphthyl-fused coumaranone 2b was also obtained in a high yield. The protocol could furnish a diversity of multiple functionalized 3-coumaranones (2j–2p) even bearing susceptible groups such as allyl (2j) and formyl (2l). Indanones (2q–2r) could be prepared by this method, albeit in relatively lower yields. Notably, the use of 2,2-disubstituted cyclohexanone 1s did not reverse the regioselectivity, though the competitive ring-expansion pathway seemed more likely due to the formation of thermodynamically favored tertiary alkyl radical. Substitutions on the cyclic framework did not influence the transformation, leading to the corresponding 3-coumaranones (2t–2y) with various aliphatic side chains. Interestingly, the reaction with tetrahydropyranone 1z resulted in 2-methyl-3-coumaranone 2z probably after the fragmentation of the ring-opened radical intermediate (see Supplementary Fig. 12). Some representative examples of cyclopentanones (1aa–1ai) were then investigated. The substitution effect on either arene or cyclopentanone was examined. Likewise, the reaction readily proceeded regardless of the electronic and steric characters, affording the resultant 3-coumaranones (2aa–2ah) in synthetically useful yields. The corresponding indanone (2ai) could also be obtained by this method, but with the modified conditions. Notably, ring opening of cycloheptanone could also afford the corresponding product 2aj in 30% yield (see Supplementary Fig. 13).
Fig. 2

Generality of protocol and scope of 3-coumaranone and indanone.

Reaction conditions: 1 (0.2 mmol), TTMSS (0.3 mmol, 1.5 equiv.), AIBN (0.01 mmol, 5 mol %), and H2O (4 mmol, 20 equiv.) in PhCF3 (2 mL) at 80 °C. Yields of isolated products are given. a1ai (0.3 mmol), TTMSS (1.5 equiv.), V-40 (20 mol %), and K2HPO4.3H2O (1 equiv.) in PhCF3 (6 mL) at 110 °C.

Generality of protocol and scope of 3-coumaranone and indanone.

Reaction conditions: 1 (0.2 mmol), TTMSS (0.3 mmol, 1.5 equiv.), AIBN (0.01 mmol, 5 mol %), and H2O (4 mmol, 20 equiv.) in PhCF3 (2 mL) at 80 °C. Yields of isolated products are given. a1ai (0.3 mmol), TTMSS (1.5 equiv.), V-40 (20 mol %), and K2HPO4.3H2O (1 equiv.) in PhCF3 (6 mL) at 110 °C. The conversion of 2-(2-bromophenoxy) cyclohexanone 8a and cyclopentanone 8b could not occur under the current condition due to the lower reactivity of arylbromide. However, the expected transformation proceeded with a modified photochemical condition, affording the corresponding products in synthetically useful yields (Fig. 3).
Fig. 3

Transformation of arylbromide analogs.

a Reaction with 2-(2-bromophenoxy) cyclohexanone. b Reaction with 2-(2-bromophenoxy) cyclopentanone.

Transformation of arylbromide analogs.

a Reaction with 2-(2-bromophenoxy) cyclohexanone. b Reaction with 2-(2-bromophenoxy) cyclopentanone. The practicality of the method was further illustrated in the modification of complex natural products (Fig. 4). Despite the location of iodine atom, both the estrone derivative 3a and 3b were readily converted to the corresponding coumaranones 4a and 4b in synthetically useful yields, respectively.
Fig. 4

Modification of complex natural product.

a Reaction with Estrone derivative 3a. b Reaction with Estrone derivative 3b.

Modification of complex natural product.

a Reaction with Estrone derivative 3a. b Reaction with Estrone derivative 3b.

Mechanistic studies

To shed light on the unusual regioselectivity of the cyclic C–C cleavage, we conducted computational studies using DFT calculations (for details, see the SI). The results are presented in Fig. 5. The cleavage of the C1–C2 bond in Int.1 via TS1a (Fig. 5a, path a) to give the nine-membered ring radical intermediate (Int.a) is a facile and reversible process with a barrier of only 3.2 kcal/mol. The energy barrier is 3.4 kcal/mol higher for the cleavage of the C1–C3 bond (via TS1b, path b) to generate the primary alkyl radical intermediate Int.b. As shown in Fig. 5b, the natural bond orbital (NBO) analysis of Int.1 reveals the hyperconjugation between the lone pairs at O4 (nO4) and the antibonding orbitals of the C1–C3 and C1–C2 bonds (σ* C1–C3 and σ* C1–C2), which would weaken both C–C single bonds and thus facilitate their cleavage[48]. The nO4 → σ* C1–C2 interaction was calculated to be about 7 kcal/mol stronger than the nO4 → σ* C1–C3 interaction (see Supplementary Tables 1 and 2). This may explain why the cleavage of the C1–C2 bond exhibits a lower energy barrier.
Fig. 5

Computational study.

a Free energy diagram (kcal/mol) calculated at the (SMD)-M06-2×/6-311++G(2d,p)//M06-2×/6-31G(d) level of theory (pink: bond length in Å). ΔG calculated at 298.15 K. b The natural bond orbital (NBO) analysis of Int.1. Interaction energies are in kcal/mol.

Computational study.

a Free energy diagram (kcal/mol) calculated at the (SMD)-M06-2×/6-311++G(2d,p)//M06-2×/6-31G(d) level of theory (pink: bond length in Å). ΔG calculated at 298.15 K. b The natural bond orbital (NBO) analysis of Int.1. Interaction energies are in kcal/mol. Interestingly, Int.a is 1.8 kcal/mol less stable than Int.b, presumably due to a greater ring strain in the nine-membered ring. The subsequent hydrogen-atom abstraction is irreversible and requires a higher barrier than the cleavage of C–C bond. The barriers for hydrogen-atom abstraction from TTMSS by Int.a and Int.b are 15.2 (via TS2a) and 10.9 (via TS2b) kcal/mol, respectively, which are at least 4.3 kcal/mol higher than that for the cyclic C–C cleavage. The formation of 3-coumaranone 2a is thermodynamically favored over 3,4,5,6-tetrahydrobenzo[b]oxonin-7(2 H)-one 2a′ by 12.8 kcal/mol. Accordingly, the 3-coumaranone 2a is both kinetically and thermodynamically favored product, which is consistent with experimental observation that only 2a was observed. Notably, an intramolecular hydrogen-atom abstraction (1,5-H transfer) is also possible for Int.b. The calculations show that the intramolecular 1,5-hydrogen atom abstraction proceeds via TS3b has a barrier of 10.4 kcal/mol, leading to a tertiary carbon radical intermediate Int.2, which is quite stable and located 26.2 kcal/mol below Int.1. Int.2 abstracts a hydrogen atom from TTMSS to deliver the final product via TS4b with a barrier of 19.8 kcal/mol. Since the intramolecular 1,5-hydrogen atom abstraction is slightly favored (only 0.5 kcal/mol) over the intermolecular hydrogen-atom abstraction (TS2b vs. TS3b), the two processes could compete with each other. This corresponds well with the isotope-labeling experiments (Fig. 6). It could also be speculated that Int.1, Int.a, and Int.b are in an equilibrium and a high energy barrier for H-transfer from TTMSS for cyclic radical Int.a may allow for preferential quenching of primary alkyl radical Int.b via either intramolecular 1,5-H-shift or intermolecular H-shift from TTMSS. It may be possible for alkoxy radical Int.1 to abstract hydrogen from TTMSS to form alcohol. Dehydration of the product can give the benzofuran-type byproduct. Overall, the calculations revealed that the selectivity of the reaction is mainly controlled by the step of hydrogen-atom abstraction instead of the C–C bond cleavage. The primary alkyl radical is more reactive than the secondary alkyl radical for hydrogen atom abstraction, leading to the observed selectivity. Replacing TTMSS by tin hydride as hydrogen atom donor leads to the similar calculational outcome (see Supplementary Fig. 178). The rational analysis for the formation of indanones could also be obtained from the DFT studies (see Supplementary Fig. 179).
Fig. 6

Deuterium labeling experiments.

a Reaction with d-TTMSS. b Reaction with deuterated cyclohexanone 6.

Deuterium labeling experiments.

a Reaction with d-TTMSS. b Reaction with deuterated cyclohexanone 6. To provide support for the computational results, we further carried out the experiments with the deuterium-labeled materials. Firstly, the reaction of 1a in the presence of d-TTMSS delivered product 5 with H/D ratio as 0.7:0.3, indicating that the final step of H-abstraction could proceed via either the intramolecular 1,5-HAT or intermolecular H-abstraction from TTMSS (Fig. 6a). While employing the deuterated cyclohexanone 6 under the previous conditions, the counting of H and D in product 7 also suggested that the radical chain termination step could go through both two pathways (Fig. 6b). A further attempt was conducted to elucidate the effect of water (for details, see Supplementary Figs. 8–10). After the completion of reaction, a highly acidic water drop (pH < 1, presumably the aqueous solution of HI) precipitated in the reaction vial, which was obtained by hydrolysis of the byproduct (TMS)3SiI[49,50]. Moreover, the addition of TFA instead of water to the reaction largely suppressed the reaction outcome by increasing the formation of benzofuran byproduct 2a′. Thus, it was hypothesized that the HI-induced acidic condition was fatal to the reaction, and water could separate HI from the reaction through the formation of a biphasic solution.

Discussion

In summary, we have disclosed an efficient radical-mediated protocol for the cleavage of inert unstrained C–C σ-bonds. Both cyclohexanones and cyclopentanones prove to be suitable substrates. A variety of synthetically valuable 3-coumaranones or indanones are readily prepared under mild conditions. The cyclic C–C bonds are cleaved in an unusual regioselectivity. DFT studies as well as the deuterium labeling experiments are sought to address the selectivity issue. This protocol provides a practical method and informative mechanistic insight for the elusive C–C activation of unstrained cycloketones.

Methods

General procedure for ring opening of cycloketones

Cycloketones (1) (0.2 mmol, 1 equiv.) and AIBN (0.01 mmol, 5 mol %) were loaded in a reaction vial that was subjected to evacuation/flushing with N2 three times. Then TTMSS (0.3 mmol, 1.5 equiv.), H2O (4 mmol, 20 equiv.) and PhCF3 (2 mL) were added to the mixture which was then heated to 80 °C. After the reaction completion, the reaction mixture was concentrated in vacuo. Purification by flash column chromatography on silica gel afforded the desired product. Peer Review File
  34 in total

1.  Suzuki-Miyaura Coupling of Simple Ketones via Activation of Unstrained Carbon-Carbon Bonds.

Authors:  Ying Xia; Jianchun Wang; Guangbin Dong
Journal:  J Am Chem Soc       Date:  2018-04-17       Impact factor: 15.419

2.  Recent Methodologies That Exploit C-C Single-Bond Cleavage of Strained Ring Systems by Transition Metal Complexes.

Authors:  Gabriele Fumagalli; Steven Stanton; John F Bower
Journal:  Chem Rev       Date:  2017-01-11       Impact factor: 60.622

Review 3.  Recent advances in transition-metal-catalyzed functionalization of unstrained carbon-carbon bonds.

Authors:  Feng Chen; Teng Wang; Ning Jiao
Journal:  Chem Rev       Date:  2014-07-25       Impact factor: 60.622

4.  Transition metal-catalyzed C-C bond activation of four-membered cyclic ketones.

Authors:  Tao Xu; Alpay Dermenci; Guangbin Dong
Journal:  Top Curr Chem       Date:  2014

5.  Cyclobutanes in catalysis.

Authors:  Tobias Seiser; Tanguy Saget; Duc N Tran; Nicolai Cramer
Journal:  Angew Chem Int Ed Engl       Date:  2011-07-26       Impact factor: 15.336

6.  Silver-catalyzed ring-opening strategy for the synthesis of β- and γ-fluorinated ketones.

Authors:  Huijun Zhao; Xuefeng Fan; Jiajia Yu; Chen Zhu
Journal:  J Am Chem Soc       Date:  2015-03-05       Impact factor: 15.419

Review 7.  Cyclobutenones and Benzocyclobutenones: Versatile Synthons in Organic Synthesis.

Authors:  Peng-Hao Chen; Guangbin Dong
Journal:  Chemistry       Date:  2016-09-13       Impact factor: 5.236

Review 8.  Recent Advances in Ring-Opening Functionalization of Cycloalkanols by C-C σ-Bond Cleavage.

Authors:  Xinxin Wu; Chen Zhu
Journal:  Chem Rec       Date:  2018-02-01       Impact factor: 6.771

9.  Conformationally gated fragmentations and rearrangements promoted by interception of the Bergman cyclization through intramolecular H-abstraction: a possible mechanism of auto-resistance to natural enediyne antibiotics?

Authors:  Abdulkader Baroudi; Justin Mauldin; Igor V Alabugin
Journal:  J Am Chem Soc       Date:  2010-01-27       Impact factor: 15.419

Review 10.  Metal Insertion into C-C Bonds in Solution.

Authors:  Boris Rybtchinski; David Milstein
Journal:  Angew Chem Int Ed Engl       Date:  1999-04-01       Impact factor: 15.336

View more
  3 in total

Review 1.  Metal-Free Catalysis in C-C Single-Bond Cleavage: Achievements and Prospects.

Authors:  Mohit L Deb; B Shriya Saikia; Iftakur Rahman; Pranjal Kumar Baruah
Journal:  Top Curr Chem (Cham)       Date:  2022-08-11

2.  Regioselective activation of benzocyclobutenones and dienamides lead to anti-Bredt bridged-ring systems by a [4+4] cycloaddition.

Authors:  Jianyu Zhang; Xi Wang; Tao Xu
Journal:  Nat Commun       Date:  2021-05-21       Impact factor: 14.919

3.  Computational, Mechanistic, and Experimental Insights into Regioselective Catalytic C-C Bond Activation in Linear 1-Aza-[3]triphenylene.

Authors:  Jan Ulč; Yuya Asanuma; Robert Moss; Gabriele Manca; Ivana Císařová; Martin Kotora
Journal:  ACS Omega       Date:  2022-03-04
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.