Literature DB >> 31996462

Immune correlates of tuberculosis disease and risk translate across species.

Mushtaq Ahmed1, Shyamala Thirunavukkarasu1, Bruce A Rosa2, Kimberly A Thomas1, Shibali Das1, Javier Rangel-Moreno3, Lan Lu1, Smriti Mehra4, Stanley Kimbung Mbandi5, Larissa B Thackray6, Michael S Diamond1,6,7, Kenneth M Murphy7, Terry Means8, John Martin2, Deepak Kaushal9, Thomas J Scriba5, Makedonka Mitreva10,6, Shabaana A Khader11.   

Abstract

One quarter of the world's population is infected with Mycobacterium tuberculosis (Mtb), the causative agent of tuberculosis (TB). Although most infected individuals successfully control or clear the infection, some individuals will progress to TB disease. Immune correlates identified using animal models are not always effectively translated to human TB, thus resulting in a slow pace of translational discoveries from animal models to human TB for many platforms including vaccines, therapeutics, biomarkers, and diagnostic discovery. Therefore, it is critical to improve our poor understanding of immune correlates of disease and protection that are shared across animal TB models and human TB. In this study, we have provided an in-depth identification of the conserved and diversified gene/immune pathways in TB models of nonhuman primate and diversity outbred mouse and human TB. Our results show that prominent differentially expressed genes/pathways induced during TB disease progression are conserved in genetically diverse mice, macaques, and humans. In addition, using gene-deficient inbred mouse models, we have addressed the functional role of individual genes comprising the gene signature of disease progression seen in humans with Mtb infection. We show that genes representing specific immune pathways can be protective, detrimental, or redundant in controlling Mtb infection and translate into identifying immune pathways that mediate TB immunopathology in humans. Together, our cross-species findings provide insights into modeling TB disease and the immunological basis of TB disease progression.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Mesh:

Year:  2020        PMID: 31996462      PMCID: PMC7354419          DOI: 10.1126/scitranslmed.aay0233

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   19.319


  99 in total

1.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
Journal:  Bioinformatics       Date:  2013-11-13       Impact factor: 6.937

2.  CXCL5-secreting pulmonary epithelial cells drive destructive neutrophilic inflammation in tuberculosis.

Authors:  Geraldine Nouailles; Anca Dorhoi; Markus Koch; Jens Zerrahn; January Weiner; Kellen C Faé; Frida Arrey; Stefanie Kuhlmann; Silke Bandermann; Delia Loewe; Hans-Joachim Mollenkopf; Alexis Vogelzang; Catherine Meyer-Schwesinger; Hans-Willi Mittrücker; Gayle McEwen; Stefan H E Kaufmann
Journal:  J Clin Invest       Date:  2014-02-10       Impact factor: 14.808

Review 3.  Versatile myeloid cell subsets contribute to tuberculosis-associated inflammation.

Authors:  Anca Dorhoi; Stefan H E Kaufmann
Journal:  Eur J Immunol       Date:  2015-08       Impact factor: 5.532

Review 4.  Cytokines and Chemokines in Mycobacterium tuberculosis Infection.

Authors:  Racquel Domingo-Gonzalez; Oliver Prince; Andrea Cooper; Shabaana A Khader
Journal:  Microbiol Spectr       Date:  2016-10

5.  Tumor necrosis factor-alpha is required in the protective immune response against Mycobacterium tuberculosis in mice.

Authors:  J L Flynn; M M Goldstein; J Chan; K J Triebold; K Pfeffer; C J Lowenstein; R Schreiber; T W Mak; B R Bloom
Journal:  Immunity       Date:  1995-06       Impact factor: 31.745

6.  Expression of fibroblast growth factor receptor 1, fibroblast growth factor 2, phosphatidyl inositol 3 phosphate kinase and their clinical and prognostic significance in early and advanced stage of squamous cell carcinoma of the lung.

Authors:  Cigdem Usul Afsar; Berksoy Sahin; Meral Gunaldi; Emine Kılıc Bagir; Derya Gumurdulu; Refik Burgut; Melek Erkisi; Ismail Oguz Kara; Semra Paydas; Feryal Karaca; Vehbi Ercolak
Journal:  Int J Clin Exp Pathol       Date:  2015-09-01

7.  Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation.

Authors:  Davis J McCarthy; Yunshun Chen; Gordon K Smyth
Journal:  Nucleic Acids Res       Date:  2012-01-28       Impact factor: 16.971

8.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

Review 9.  Neutrophils in Tuberculosis: Heterogeneity Shapes the Way?

Authors:  Irina V Lyadova
Journal:  Mediators Inflamm       Date:  2017-05-24       Impact factor: 4.711

10.  Abnormal Complement Activation and Inflammation in the Pathogenesis of Retinopathy of Prematurity.

Authors:  Sonika Rathi; Subhadra Jalali; Satish Patnaik; Shahna Shahulhameed; Ganeswara R Musada; Divya Balakrishnan; Padmaja K Rani; Ramesh Kekunnaya; Preeti Patil Chhablani; Sarpras Swain; Lopamudra Giri; Subhabrata Chakrabarti; Inderjeet Kaur
Journal:  Front Immunol       Date:  2017-12-22       Impact factor: 7.561

View more
  16 in total

1.  SCARF1-Induced Efferocytosis Plays an Immunomodulatory Role in Humans, and Autoantibodies Targeting SCARF1 Are Produced in Patients with Systemic Lupus Erythematosus.

Authors:  April M Jorge; Taotao Lao; Rachel Kim; Samantha Licciardi; Joseph El Khoury; Andrew D Luster; Terry K Means; Zaida G Ramirez-Ortiz
Journal:  J Immunol       Date:  2022-01-26       Impact factor: 5.422

Review 2.  The Road to Elimination: Current State of Schistosomiasis Research and Progress Towards the End Game.

Authors:  Paul Ogongo; Ruth K Nyakundi; Gerald K Chege; Lucy Ochola
Journal:  Front Immunol       Date:  2022-05-03       Impact factor: 8.786

Review 3.  The knowns and unknowns of latent Mycobacterium tuberculosis infection.

Authors:  W Henry Boom; Ulrich E Schaible; Jacqueline M Achkar
Journal:  J Clin Invest       Date:  2021-02-01       Impact factor: 14.808

4.  Sterilizing immunity: New opportunities for rational TB vaccine design.

Authors:  Alan Sher; Joanne L Flynn
Journal:  J Exp Med       Date:  2021-05-26       Impact factor: 14.307

5.  Host-pathogen genetic interactions underlie tuberculosis susceptibility in genetically diverse mice.

Authors:  Clare M Smith; Richard E Baker; Megan K Proulx; Bibhuti B Mishra; Jarukit E Long; Sae Woong Park; Ha-Na Lee; Michael C Kiritsy; Michelle M Bellerose; Andrew J Olive; Kenan C Murphy; Kadamba Papavinasasundaram; Frederick J Boehm; Charlotte J Reames; Rachel K Meade; Brea K Hampton; Colton L Linnertz; Ginger D Shaw; Pablo Hock; Timothy A Bell; Sabine Ehrt; Dirk Schnappinger; Fernando Pardo-Manuel de Villena; Martin T Ferris; Thomas R Ioerger; Christopher M Sassetti
Journal:  Elife       Date:  2022-02-03       Impact factor: 8.140

6.  The immune landscape in tuberculosis reveals populations linked to disease and latency.

Authors:  Ekaterina Esaulova; Shibali Das; Dhiraj Kumar Singh; Jose Alberto Choreño-Parra; Amanda Swain; Laura Arthur; Javier Rangel-Moreno; Mushtaq Ahmed; Bindu Singh; Ananya Gupta; Luis Alejandro Fernández-López; Maria de la Luz Garcia-Hernandez; Allison Bucsan; Chivonne Moodley; Smriti Mehra; Ethel García-Latorre; Joaquin Zuniga; Jeffrey Atkinson; Deepak Kaushal; Maxim N Artyomov; Shabaana A Khader
Journal:  Cell Host Microbe       Date:  2020-12-18       Impact factor: 31.316

7.  IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection.

Authors:  Bruce A Rosa; Mushtaq Ahmed; Dhiraj K Singh; José Alberto Choreño-Parra; Journey Cole; Luis Armando Jiménez-Álvarez; Tatiana Sofía Rodríguez-Reyna; Bindu Singh; Olga Gonzalez; Ricardo Carrion; Larry S Schlesinger; John Martin; Joaquín Zúñiga; Makedonka Mitreva; Shabaana A Khader; Deepak Kaushal
Journal:  bioRxiv       Date:  2020-08-06

8.  Immunologic goalposts for TB vaccine development.

Authors:  Peter K Um; William R Bishai
Journal:  Cell Host Microbe       Date:  2021-02-10       Impact factor: 21.023

9.  Ultra-low Dose Aerosol Infection of Mice with Mycobacterium tuberculosis More Closely Models Human Tuberculosis.

Authors:  Courtney R Plumlee; Fergal J Duffy; Benjamin H Gern; Jared L Delahaye; Sara B Cohen; Caleb R Stoltzfus; Tige R Rustad; Scott G Hansen; Michael K Axthelm; Louis J Picker; John D Aitchison; David R Sherman; Vitaly V Ganusov; Michael Y Gerner; Daniel E Zak; Kevin B Urdahl
Journal:  Cell Host Microbe       Date:  2020-11-02       Impact factor: 21.023

10.  Use of a Contained Mycobacterium tuberculosis Mouse Infection Model to Predict Active Disease and Containment in Humans.

Authors:  Fergal J Duffy; Gregory S Olson; Elizabeth S Gold; Ana Jahn; Alan Aderem; John D Aitchison; Alissa C Rothchild; Alan H Diercks; Johannes Nemeth
Journal:  J Infect Dis       Date:  2022-05-16       Impact factor: 7.759

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.