Literature DB >> 31985414

Multi-Needle Detection in 3D Ultrasound Images Using Unsupervised Order-Graph Regularized Sparse Dictionary Learning.

Yupei Zhang, Xiuxiu He, Zhen Tian, Jiwoong Jason Jeong, Yang Lei, Tonghe Wang, Qiulan Zeng, Ashesh B Jani, Walter J Curran, Pretesh Patel, Tian Liu, Xiaofeng Yang.   

Abstract

Accurate and automatic multi-needle detection in three-dimensional (3D) ultrasound (US) is a key step of treatment planning for US-guided brachytherapy. However, most current studies are concentrated on single-needle detection by only using a small number of images with a needle, regardless of the massive database of US images without needles. In this paper, we propose a workflow for multi-needle detection by considering the images without needles as auxiliary. Concretely, we train position-specific dictionaries on 3D overlapping patches of auxiliary images, where we develop an enhanced sparse dictionary learning method by integrating spatial continuity of 3D US, dubbed order-graph regularized dictionary learning. Using the learned dictionaries, target images are reconstructed to obtain residual pixels which are then clustered in every slice to yield centers. With the obtained centers, regions of interest (ROIs) are constructed via seeking cylinders. Finally, we detect needles by using the random sample consensus algorithm per ROI and then locate the tips by finding the sharp intensity drops along the detected axis for every needle. Extensive experiments were conducted on a phantom dataset and a prostate dataset of 70/21 patients without/with needles. Visualization and quantitative results show the effectiveness of our proposed workflow. Specifically, our method can correctly detect 95% of needles with a tip location error of 1.01 mm on the prostate dataset. This technique provides accurate multi-needle detection for US-guided HDR prostate brachytherapy, facilitating the clinical workflow.

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Mesh:

Year:  2020        PMID: 31985414      PMCID: PMC7370243          DOI: 10.1109/TMI.2020.2968770

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  20 in total

1.  Laplacian sparse coding, Hypergraph Laplacian sparse coding, and applications.

Authors:  Shenghua Gao; Ivor Wai-Hung Tsang; Liang-Tien Chia
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-01       Impact factor: 6.226

2.  Needle detection in curvilinear ultrasound images based on the reflection pattern of circular ultrasound waves.

Authors:  Mohammad I Daoud; Robert N Rohling; Septimiu E Salcudean; Purang Abolmaesumi
Journal:  Med Phys       Date:  2015-11       Impact factor: 4.071

3.  Sparse subspace clustering: algorithm, theory, and applications.

Authors:  Ehsan Elhamifar; René Vidal
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2013-11       Impact factor: 6.226

4.  Sparse coding with an overcomplete basis set: a strategy employed by V1?

Authors:  B A Olshausen; D J Field
Journal:  Vision Res       Date:  1997-12       Impact factor: 1.886

5.  Learning needle tip localization from digital subtraction in 2D ultrasound.

Authors:  Cosmas Mwikirize; John L Nosher; Ilker Hacihaliloglu
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-03-25       Impact factor: 2.924

6.  Medical Instrument Detection in 3-Dimensional Ultrasound Data Volumes.

Authors:  Arash Pourtaherian; Harm J Scholten; Lieneke Kusters; Svitlana Zinger; Nenad Mihajlovic; Alexander F Kolen; Fei Zuo; Gary C Ng; Hendrikus H M Korsten; Peter H N de With
Journal:  IEEE Trans Med Imaging       Date:  2017-04-07       Impact factor: 10.048

7.  A hybrid camera- and ultrasound-based approach for needle localization and tracking using a 3D motorized curvilinear ultrasound probe.

Authors:  Mohammad I Daoud; Abdel-Latif Alshalalfah; Otmane Ait Mohamed; Rami Alazrai
Journal:  Med Image Anal       Date:  2018-10-03       Impact factor: 8.545

8.  Convolution neural networks for real-time needle detection and localization in 2D ultrasound.

Authors:  Cosmas Mwikirize; John L Nosher; Ilker Hacihaliloglu
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-03-06       Impact factor: 2.924

9.  Line filtering for surgical tool localization in 3D ultrasound images.

Authors:  Marián Uherčík; Jan Kybic; Yue Zhao; Christian Cachard; Hervé Liebgott
Journal:  Comput Biol Med       Date:  2013-10-10       Impact factor: 4.589

10.  Robust and semantic needle detection in 3D ultrasound using orthogonal-plane convolutional neural networks.

Authors:  Arash Pourtaherian; Farhad Ghazvinian Zanjani; Svitlana Zinger; Nenad Mihajlovic; Gary C Ng; Hendrikus H M Korsten; Peter H N de With
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-05-31       Impact factor: 2.924

View more
  7 in total

1.  Multi-needle Localization with Attention U-Net in US-guided HDR Prostate Brachytherapy.

Authors:  Yupei Zhang; Yang Lei; Richard L J Qiu; Tonghe Wang; Hesheng Wang; Ashesh B Jani; Walter J Curran; Pretesh Patel; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2020-04-03       Impact factor: 4.071

2.  Automatic multi-catheter detection using deeply supervised convolutional neural network in MRI-guided HDR prostate brachytherapy.

Authors:  Xianjin Dai; Yang Lei; Yupei Zhang; Richard L J Qiu; Tonghe Wang; Sean A Dresser; Walter J Curran; Pretesh Patel; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2020-06-15       Impact factor: 4.071

Review 3.  A review of deep learning based methods for medical image multi-organ segmentation.

Authors:  Yabo Fu; Yang Lei; Tonghe Wang; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Phys Med       Date:  2021-05-13       Impact factor: 2.685

4.  An MRI Study on Effects of Math Education on Brain Development Using Multi-Instance Contrastive Learning.

Authors:  Yupei Zhang; Shuhui Liu; Xuequn Shang
Journal:  Front Psychol       Date:  2021-11-24

5.  Identifying Non-Math Students from Brain MRIs with an Ensemble Classifier Based on Subspace-Enhanced Contrastive Learning.

Authors:  Shuhui Liu; Yupei Zhang; Jiajie Peng; Tao Wang; Xuequn Shang
Journal:  Brain Sci       Date:  2022-07-12

6.  Deep learning-based digitization of prostate brachytherapy needles in ultrasound images.

Authors:  Christoffer Andersén; Tobias Rydén; Per Thunberg; Jakob H Lagerlöf
Journal:  Med Phys       Date:  2020-10-27       Impact factor: 4.071

7.  Educational Data Mining Techniques for Student Performance Prediction: Method Review and Comparison Analysis.

Authors:  Yupei Zhang; Yue Yun; Rui An; Jiaqi Cui; Huan Dai; Xunqun Shang
Journal:  Front Psychol       Date:  2021-12-07
  7 in total

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