Literature DB >> 31984680

BBOX1-AS1 contributes to colorectal cancer progression by sponging hsa-miR-361-3p and targeting SH2B1.

Jiasheng Liu1, Jie Zhu2, Zhe Xiao1, Xufeng Wang1, Jianfei Luo1.   

Abstract

Colorectal cancer (CRC) is the third main cause of cancer-relevant deaths worldwide, and its incidence has increased in recent decades. Previous studies have indicated that certain long noncoding RNAs (lncRNAs) have regulatory roles in tumor occurrence and progression. Often, lncRNAs are competitive endogenous RNAs that sponge microRNAs to up-regulate mRNAs. Here, we examined the role of a novel lncRNA gamma-butyrobetaine hydroxylase 1 antisense RNA 1 (BBOX1-AS1) in CRC. We observed that BBOX1-AS1 is overexpressed in CRC cell lines, and BBOX1-AS1 knockdown enhances cell proliferation, migration and invasion while reducing cell apoptosis. miR-361-3p is present at a low level in CRC and is negatively modified by BBOX1-AS1. Moreover, miR-361-3p was validated to be targeted by BBOX1-AS1. Src homology 2 B adaptor protein 1 (SH2B1) was notably upregulated in CRC cell lines and was identified as a downstream gene of miR-361-3p. In addition, we found that miR-361-3p amplification can suppress the expression of SH2B1. Finally, data from rescue assays suggested that overexpression of SH2B1 counteracted BBOX1-AS1 silencing-mediated inhibition of CRC progression. In conclusion, BBOX1-AS1 promotes CRC progression by sponging hsa-miR-361-3p and up-regulating SH2B1.
© 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd.

Entities:  

Keywords:  zzm321990BBOX1-AS1zzm321990; zzm321990SH2B1zzm321990; zzm321990miR-361-3pzzm321990; colorectal cancer

Mesh:

Substances:

Year:  2022        PMID: 31984680      PMCID: PMC9063435          DOI: 10.1002/2211-5463.12802

Source DB:  PubMed          Journal:  FEBS Open Bio        ISSN: 2211-5463            Impact factor:   2.792


gamma‐butyrobetaine hydroxylase 1 antisense RNA 1 Cell Counting Kit‐8 competing endogenous RNA colorectal cancer epithelial–mesenchymal transition glyceraldehyde‐3 phosphate dehydrogenase long noncoding RNA microRNA mutant negative control RNA immunoprecipitation standard deviation short hairpin RNA targeting BBOX1‐AS1 Src homology 2 B adaptor protein 1 wild‐type Colorectal cancer (CRC) is known as the third main cause of cancer‐relevant deaths worldwide, and its occurrence continues to increase in recent decades [1]. Although great progress has been made in medical strategy, the prognosis of patients with CRC is still largely disappointing on account of the distant metastasis of tumor in advanced stage [2]. Consequently, it is greatly urgent to search the molecular mechanisms underlying CRC progression and to explore potential therapies for patients with CRC. Long noncoding RNAs (lncRNAs) are a group of RNAs whose length is >200 nucleotides and limited to code proteins [3]. They are reported to exert key roles in the regulation of genetic transcription and pathogenesis of various tumors [4, 5]. For example, lncRNA HOXD‐AS1 was confirmed to drive the metastasis of melanoma cells by restraining the expression of RUNX3 [6]. In addition, high expression of HULC resulted in a poor prognosis and facilitated the prostate cancer progression via regulating the epithelial–mesenchymal transition (EMT) process [7]. It was widely recognized that lncRNA could interact with microRNAs (miRNAs) via functioning as competing endogenous RNA (ceRNA) that secluded miRNAs leading to suppression of their modulatory role in target mRNAs [8]. Several reports have shown that lncRNAs, as ceRNA, impacted tumor initiation and progression, reflecting a new regulatory mechanism at posttranscriptional level. For instance, lncRNA TUG1 was identified as an oncogene in osteosarcoma and enhanced osteosarcoma cell growth through modulating the expressions of miR‐212‐3p and FOXA1 [9]. lncRNA PVT1‐5 was discovered to participate in the regulation of lung cancer cell proliferation by sponging miR‐126 and targeting SLC7A5 [10]. In addition, numerous lncRNAs are validated to serve as a ceRNA in CRC progression. SOX21‐AS1 functioned as a sponge for miR‐145 to boost CRC tumorigenesis through targeting MYO6 [11]. HIF1A‐AS2 exerted a promotive effect on CRC progression and EMT formation by regulating the miR‐129‐5p/DNMT3A axis [12]. Up‐regulated in colorectal cancer liver metastasis (UICLM) enhanced liver metastasis of CRC via functioning as a ceRNA for miRNA‐215 to modify ZEB2 expression [13]. gamma‐Butyrobetaine hydroxylase 1 antisense RNA 1 (BBOX1‐AS1), a novel lncRNA, has not been investigated in cancers. In this study, we devoted to probing the biological role and mechanism of BBOX1‐AS1 in CRC. It was found that BBOX1‐AS1 drives CRC progression by sponging hsa‐miR‐361‐3p and up‐regulating Src homology 2 B adaptor protein 1 (SH2B1). This discovery provides a promising theoretical basis for the exploration of CRC therapeutic strategies.

Materials and methods

Cell culture

CRC cell lines (GEO, SW480, HCT116 and LOVO) and the human colorectal mucosal cell line (FHC) were gained from Chinese Academy of Sciences (Beijing, China). A Dulbecco’s modified Eagle’s medium (Corning Life Sciences, Tewksbury, MA, USA) mixed with 10% FBS (Warbison Technology, Beijing, China), 100 mg·mL−1 penicillin and streptomycin (Invitrogen, Karlsruhe, Germany) were used for culturing the earlier cells in a humid atmosphere at 37 °C with a 5% CO2.

Cell transfection

Cells were plated into six‐well plates under a density of 70–80%. The short hairpin RNAs targeting BBOX1‐AS1 (sh‐BBOX1‐AS1#1/2) or their negative control (sh‐NC) purchased from Genechem (Shanghai, China) were transfected into GEO and HCT116 cells. The overexpression plasmid pcDNA3.1/SH2B1 and the empty pcDNA3.1 vector were obtained from Genechem. The miR‐361‐3p mimics or NC mimics were constructed by ZonHon Biopharma Institute (Changzhou, Jiangsu, China). Lipofectamine 2000 (Invitrogen) was performed for transfection that was conducted 48 h later.

Quantitative real‐time PCR

Total RNA was separated from cultured cells by TRIzol reagent (Thermo Fisher Scientific, Waltham, MA, USA) based on the manufacturer’s guides. Reverse Transcription Kit (Takara, Tokyo, Japan) was applied to reverse transcription. The quantitative real‐time PCR analysis was conducted by SYBR Green Premix PCR Master Mix (Roche, Mannheim, Germany) via ABI HT9600 (Applied Biosystems, Foster City, CA, USA). The relative RNA level was detected using the method. In addition, glyceraldehyde‐3 phosphate dehydrogenase (GAPDH) or U6 served as internal control.

Western blot

Total protein was extracted from lysates added with protein inhibitors. Extracted proteins were isolated by SDS/PAGE (Boster Biological Technology, Los Angeles, CA, USA) and then transferred into poly(vinylidene fluoride) (East Fluorine Chemical Technology, Shanghai, China). After being blocked with skim milk, the membranes were incubated with primary antibodies at 4 °C overnight. The primary antibodies for our experiment were SH2B1 Ig (ab228828; Abcam, Cambridge, UK) and GAPDH Ig (ab8245; Abcam). GAPDH was seen as a reference. The protein blot was visualized by enhanced chemiluminescence system (GE Healthcare, Chicago, IL, USA).

Colony formation assay

At first, about 800 cells were seeded into six‐well plates after transfection. After being incubated in a chamber under an environment of 5% CO2 at 37 °C for 2 weeks, paraformaldehyde (Solarbio, Beijing, China) was used to fix the colonies for 10 min and dyed with crystal violet (Beyotime, Nantong, Jiangsu, China) for 5 min. Colonies were counted manually.

Luciferase reporter assay

The wild‐type (WT) binding sites of SH2B1/BBOX1‐AS1 and the mutant (Mut) binding sites of SH2B1/BBOX1‐AS1 with miR‐361‐3p were subcloned into pmirGLO dual‐luciferase vector to construct SH2B1‐WT/BBOX1‐AS1‐WT and SH2B1‐Mut/BBOX1‐AS1‐Mut plasmids. Then miR‐361‐3p mimics or NC mimics were cotransfected into GEO or HCT116 cells, respectively. After the transfection of 48 h, luciferase activity was detected.

Transwell invasion assay

The aim of transwell assay was to test the invasion ability of GEO and HCT116 cells. Cells were seeded on the upper chamber, which the membrane precoated with Matrigel matrix gel (BD Biosciences, San Jose, CA, USA). The upper chamber was applied with serum‐free medium, and the lower chamber was added with 10% FBS. Invaded cells were fixed with methanol (Ceran Technology, Chengdu, China) and dyed with crystal violet after the scheduled time. Five fields at random were counted, and invaded cells were observed via a microscope.

Cell Counting Kit‐8 assay

The GEO or HCT116 cells (1 × 103 cells/well) were seeded in six‐well plates in a complete medium and cultured for 0, 24, 48, 72 and 96 h. Then Cell Counting Kit‐8 (CCK‐8; Dojindo Molecular Technologies, Tokyo, Japan) solution was added and incubated for an additional 2 h. Relative cell viability was determined using an EL × 800 micro‐immuno analyzer (Bio‐Tek, Winooski, VT, USA).

TUNEL staining assay

TUNEL assay was conducted to analyze the level of cell apoptosis in GEO and HCT116 cells. After TUNEL staining, the GEO or HCT116 cells were stained using 4′,6‐diamidino‐2‐phenylindole (Sigma‐Aldrich, Downtowner, St. Louis, MO, USA). After that, relative fluorescence intensity was observed using a laser scanning confocal microscope (Olympus, Tokyo, Japan).

Flow cytometry analysis

Annexin V‐FITC/PI Apoptosis kit (Invitrogen) was used to measure the apoptosis of GEO and HCT116 cells. In brief, the apoptotic cells were cleaned using PBS (Solarbio) and resuspended. Later, 70% ethanol cooled by ice was used to fix cells. At last, the apoptosis rate was evaluated by FACSCalibur flow cytometer (BD Biosciences).

Cell scratch test

GEO or HCT116 cells were centrifuged, and the cell suspension was cultured in six‐well plates for 24 h. After the degree of cell fusion reached 80–90%, the transfer gun was used to draw some scratches on the back of each plate with the same force. Then the plates were washed thrice with PBS (Thermo Fisher Scientific). Images were photographed at 0 and 24 h on motic images advanced 3.2 software (Motic Asia, Hong Kong, China).

Subcellular fractionation assay

In line with the manufacturer’s protocol, PARIS Kit (Invitrogen) was used to isolate nuclear and cytoplasmic fractions. Relative BBOX1‐AS1, GAPDH (cytoplasmic control) and U6 (nuclear control) expressions in the cytoplasm or nuclear of GEO and HCT116 cells were assessed by quantitative real‐time PCR.

RNA immunoprecipitation assay

Imprint RNA immunoprecipitation (RIP) kit (Millipore, Bedford, MA, USA) following the specification was used for RIP assays. In brief, GEO or HCT116 cells lysed in RIP lysis buffer were incubated with anti‐Ago2 antibody or anti‐IgG antibody that was preattached to magnetic beads. The quantitative real‐time PCR was applied for the detection of immunoprecipitated RNA.

RNA pull‐down assay

RNA pull‐down assay was chosen to confirm the specific binding of BBOX1‐AS1 and hsa‐miR‐361‐3p. The acquired cell lysates were treated with Bio‐miR‐361‐3p‐WT/Mut or Bio‐miR‐NC, together with streptavidin‐labeled magnetic beads. The compound was analyzed by the quantitative real‐time PCR.

Statistical analysis

graphpad prism 7.0 software (La Jolla, CA, USA) was applied for statistical analysis, and the experimental data from at least three independent experiments were shown as mean values ± standard deviation (SD). The Student’s t‐test or one‐way/two‐way ANOVA was used for analyzing the comparisons of groups. Statistical significance was obtained when P < 0.05.

Results

BBOX1‐AS1 is overexpressed in CRC cell lines and facilitates CRC cell proliferation, migration and invasion while inhibiting apoptosis

First, quantitative real‐time PCR analysis was used for detecting BBOX1‐AS1 expression in CRC cell lines (GEO, SW480, HCT116, LOVO), and one colorectal mucosal cell line (FHC) was used as a reference. As a result, a high level of BBOX1‐AS1 was found in CRC cell lines (Fig. 1A, P < 0.05, P < 0.01). To investigate the function of BBOX1‐AS1 on CRC progression, we transfected GEO and HCT116 cells with sh‐BBOX1‐AS1 for knocking down BBOX1‐AS1 expression (Fig. 1B, P < 0.01), and sh‐BBOX1‐AS1#1 was chosen for the subsequent assays because of the better interfering efficiency. The results from CCK‐8 and colony formation assays disclosed that silenced BBOX1‐AS1 significantly restrained the proliferation in GEO and HCT116 cells (Fig. 1C,D, P < 0.01). The apoptosis in GEO and HCT116 cells was evidently hastened with the transfection of sh‐BBOX1‐AS1 through TUNEL assay and flow cytometry analysis (Fig. 1E,F, P < 0.01). Later, wound healing assay delineated that BBOX1‐AS1 deficiency dramatically suppressed the migration in GEO and HCT116 cells (Fig. 1G, P < 0.01). Lastly, transwell assay was conducted to assess cell invasion. As expected, sh‐BBOX1‐AS1 transfection effectively inhibited the invasion in GEO and HCT116 cells (Fig. 1H, P < 0.01). Taken together, BBOX1‐AS1 was overexpressed in CRC cell lines and facilitated CRC cell proliferation, migration and invasion while inhibiting apoptosis.
Fig. 1

BBOX1‐AS1 is up‐regulated in CRC cell lines and promotes CRC cell proliferation, migration and invasion while inhibiting apoptosis. (A) BBOX1‐AS1 expression in CRC cell lines (GEO, SW480, HCT116, and LOVO) and colorectal mucosal cell line (FHC) was detected (n = 4). One‐way ANOVA. (B) The transfection efficiency of sh‐BBOX1‐AS1 was tested (n = 4). One‐way ANOVA. (C, D) CCK‐8 (two‐way ANOVA) and colony formation assays (Student's t‐test) showed the proliferation in GEO and HCT116 cells, which were transfected with sh‐BBOX1‐AS1 and sh‐NC (n = 4). (E, F) TUNEL assay (scale bars, 150 μm) and flow cytometry analysis were performed to assess the apoptosis of GEO and HCT116 cells after BBOX1‐AS1 was knocked down (n = 4). Student’s t‐test. (G) With the transfection of sh‐BBOX1‐AS1, representative images of migrated cells were illustrated through wound healing assay (scale bars, 160 μm; n = 4). Student’s t‐test. (H) Transwell assay (scale bars, 180 μm) was applied to evaluate cell invasion in GEO and HCT116 cells, which depleted BBOX1‐AS1 (n = 4). Student’s t‐test. The error bars indicate SD. *P < 0.05, **P < 0.01 suggested a statistically significant difference in comparison with the control group.

BBOX1‐AS1 is up‐regulated in CRC cell lines and promotes CRC cell proliferation, migration and invasion while inhibiting apoptosis. (A) BBOX1‐AS1 expression in CRC cell lines (GEO, SW480, HCT116, and LOVO) and colorectal mucosal cell line (FHC) was detected (n = 4). One‐way ANOVA. (B) The transfection efficiency of sh‐BBOX1‐AS1 was tested (n = 4). One‐way ANOVA. (C, D) CCK‐8 (two‐way ANOVA) and colony formation assays (Student's t‐test) showed the proliferation in GEO and HCT116 cells, which were transfected with sh‐BBOX1‐AS1 and sh‐NC (n = 4). (E, F) TUNEL assay (scale bars, 150 μm) and flow cytometry analysis were performed to assess the apoptosis of GEO and HCT116 cells after BBOX1‐AS1 was knocked down (n = 4). Student’s t‐test. (G) With the transfection of sh‐BBOX1‐AS1, representative images of migrated cells were illustrated through wound healing assay (scale bars, 160 μm; n = 4). Student’s t‐test. (H) Transwell assay (scale bars, 180 μm) was applied to evaluate cell invasion in GEO and HCT116 cells, which depleted BBOX1‐AS1 (n = 4). Student’s t‐test. The error bars indicate SD. *P < 0.05, **P < 0.01 suggested a statistically significant difference in comparison with the control group.

BBOX1‐AS1 acts as a sponge for miR‐361‐3p

It was reported that lncRNAs sponged miRNAs and thereby regulated mRNAs expression to mediate biological processes at posttranscriptional level. Using subcellular fractionation assay, we found the main expression of BBOX1‐AS1 in the cytoplasm of GEO and HCT116 cells (Fig. 2A), indicating posttranscriptional regulation of BBOX1‐AS1 in CRC. RIP assay indicated that BBOX1‐AS1 was specifically enriched in Ago2 immunoprecipitate (Fig. 2B, P < 0.001). These results provided a hypothesis that BBOX1‐AS1 might be a ceRNA in CRC. As illustrated in Fig. 2C, two potential miRNAs (miR‐3940‐3p, miR‐361‐3p) were predicted to be sponged by BBOX1‐AS1 (Fig. 2C). Then RIP assay displayed that the enrichment of miR‐361‐3p in beads conjugated with Ago2 antibodies was much higher (P < 0.01), whereas that of miR‐3940‐3p was not statistically significant (Fig. 2D). Hence we predicted that miR‐361‐3p acted as a target of BBOX1‐AS1. With the use of starbase (http://starbase.sysu.edu.cn/), the binding site between BBOX1‐AS1 and miR‐361‐3p was presented in Fig. 2E. Subsequently, it was found that miR‐361‐3p was down‐regulated in CRC cell lines (Fig. 2F, P < 0.05, P < 0.01). In addition, the silence of BBOX1‐AS1 could increase miR‐361‐3p expression (Fig. 2G, P < 0.01). Besides, transfection efficiency of miR‐361‐3p mimics was detected, and results showed that miR‐361‐3p expression was prominently elevated with the transfection of miR‐361‐3p mimics (Fig. 2H, P < 0.01). Luciferase reporter assay delineated that relative luciferase intensity of WT BBOX1‐AS1 was significantly reduced with the treatment of miR‐361‐3p mimics (P < 0.01), whereas no remarkable difference was shown in that of Mut type (Fig. 2I). In addition, RNA pull‐down assay with biotinylated miR‐361‐3p implied that BBOX1‐AS1 was pulled down by Bio‐miR‐361‐3p‐WT (Fig. 2J, P < 0.01). All data expounded that BBOX1‐AS1 acted as a sponge for miR‐361‐3p.
Fig. 2

BBOX1‐AS1 acts as a sponge for miR‐361‐3p. (A) Subcellular fractionation assay was used to determine the distribution of BBOX1‐AS1 in GEO and HCT116 cells (n = 4). (B) RIP assay confirmed the combination between BBOX1‐AS1 and RNA‐induced silencing complex (n = 4). Student’s t‐test. (C) The potential miRNAs predicted from starbase for BBOX1‐AS1 were displayed. (D) The enrichment of potential miRNAs in the beads conjugated with the antibody of Ago2 or IgG was measured by RIP assay (n = 4). Student’s t‐test. (E) The binding site between miR‐361‐3p and BBOX1‐AS1 was presented. (F) Quantitative real‐time PCR analysis was used to test miR‐361‐3p expression in CRC cell lines and the colorectal mucosal cell line (n = 4). One‐way ANOVA. (G) The expression of miR‐361‐3p in BBOX1‐AS1‐silenced cells was detected (n = 4). One‐way ANOVA. (H) The expression of miR‐361‐3p in CRC cells transfected with miR‐361‐3p mimics was detected (n = 4). Student’s t‐test. (I) Luciferase reporter assay was conducted to confirm the interaction between BBOX1‐AS1 and miR‐361‐3p (n = 4). Student’s t‐test. (J) BBOX1‐AS1 was verified to combine with miR‐361‐3p by RNA pull‐down assay (n = 4). One‐way ANOVA. The error bars indicate SD. *P < 0.05, **P < 0.01, ***P < 0.001 revealed a statistically significant difference in comparison with the control group.

BBOX1‐AS1 acts as a sponge for miR‐361‐3p. (A) Subcellular fractionation assay was used to determine the distribution of BBOX1‐AS1 in GEO and HCT116 cells (n = 4). (B) RIP assay confirmed the combination between BBOX1‐AS1 and RNA‐induced silencing complex (n = 4). Student’s t‐test. (C) The potential miRNAs predicted from starbase for BBOX1‐AS1 were displayed. (D) The enrichment of potential miRNAs in the beads conjugated with the antibody of Ago2 or IgG was measured by RIP assay (n = 4). Student’s t‐test. (E) The binding site between miR‐361‐3p and BBOX1‐AS1 was presented. (F) Quantitative real‐time PCR analysis was used to test miR‐361‐3p expression in CRC cell lines and the colorectal mucosal cell line (n = 4). One‐way ANOVA. (G) The expression of miR‐361‐3p in BBOX1‐AS1‐silenced cells was detected (n = 4). One‐way ANOVA. (H) The expression of miR‐361‐3p in CRC cells transfected with miR‐361‐3p mimics was detected (n = 4). Student’s t‐test. (I) Luciferase reporter assay was conducted to confirm the interaction between BBOX1‐AS1 and miR‐361‐3p (n = 4). Student’s t‐test. (J) BBOX1‐AS1 was verified to combine with miR‐361‐3p by RNA pull‐down assay (n = 4). One‐way ANOVA. The error bars indicate SD. *P < 0.05, **P < 0.01, ***P < 0.001 revealed a statistically significant difference in comparison with the control group.

SH2B1 is a target gene of miR‐361‐3p

To support the hypothesis of a ceRNA mechanism, we then explored the target gene of miR‐361‐3p. It was predicted from three databases (PITA, RNA22, and PicTar) that SH2B1 and CNOT3 were the potential downstream molecules for miR‐361‐3p (Fig. 3A). Quantitative real‐time PCR analysis depicted the inhibitory effect of miR‐361‐3p elevation on SH2B1 (P < 0.01), rather than on CNOT3 (Fig. 3B). Therefore, SH2B1 was chosen for the subsequent experiments. Importantly, high SH2B1 level was detected in CRC cell lines (Fig. 3C, P < 0.05, P < 0.01). Moreover, SH2B1 3′ UTR was predicted to possess a binding site matched with the sequence of miR‐361‐3p (Fig. 3D). Luciferase reporter assay later confirmed that miR‐361‐3p up‐regulation overtly lessened the luciferase activity of SH2B1‐WT (P < 0.01) but had no effect on that of SH2B1‐Mut (Fig. 3E). Finally, we found that miR‐361‐3p overexpression markedly reduced SH2B1 mRNA expression (P < 0.01) and protein level (Fig. 3F,G). Hence SH2B1 was validated as a downstream gene of miR‐361‐3p.
Fig. 3

SH2B1 is a target gene of miR‐361‐3p. (A) The potential target genes of miR‐361‐3p were predicted from three databases (PITA, RNA22, and PicTar). (B) Quantitative real‐time PCR analysis was used to test the expressions of potential target genes in CRC cells transfected with miR‐361‐3p mimics (n = 4). Student’s t‐test. (C) SH2B1 expression level was measured in CRC cell lines and the colorectal mucosal cell line (n = 4). One‐way ANOVA. (D) The predicated binding sites of miR‐361‐3p on SH2B1 3′ UTR were demonstrated. (E) Luciferase reporter assay was performed to verify the interaction between miR‐361‐3p and SH2B1 (n = 4). Student’s t‐test. (F, G) The effect of miR‐361‐3p mimics on SH2B1 mRNA and protein levels was estimated (n = 4). Student’s t‐test. The error bars indicate SD. *P < 0.05, **P < 0.01 implied a statistically significant difference in comparison with the control group.

SH2B1 is a target gene of miR‐361‐3p. (A) The potential target genes of miR‐361‐3p were predicted from three databases (PITA, RNA22, and PicTar). (B) Quantitative real‐time PCR analysis was used to test the expressions of potential target genes in CRC cells transfected with miR‐361‐3p mimics (n = 4). Student’s t‐test. (C) SH2B1 expression level was measured in CRC cell lines and the colorectal mucosal cell line (n = 4). One‐way ANOVA. (D) The predicated binding sites of miR‐361‐3p on SH2B1 3′ UTR were demonstrated. (E) Luciferase reporter assay was performed to verify the interaction between miR‐361‐3p and SH2B1 (n = 4). Student’s t‐test. (F, G) The effect of miR‐361‐3p mimics on SH2B1 mRNA and protein levels was estimated (n = 4). Student’s t‐test. The error bars indicate SD. *P < 0.05, **P < 0.01 implied a statistically significant difference in comparison with the control group.

BBOX1‐AS1 promotes CRC progression by sponging miR‐361‐3p and up‐regulating SH2B1

In line with the earlier results, it was speculated that BBOX1‐AS1 might serve as a ceRNA and regulate the miR‐361‐3p/SH2B1 axis in the progression of CRC. To verify this speculation, we designed and conducted some rescue experiments. First, the expression of SH2B1 was increased using pcDNA3.1/SH2B1 (Fig. 4A, P < 0.01). CCK‐8 assay delineated that the proliferation restrained by BBOX1‐AS1 silencing was recovered with transfection of pcDNA3.1/SH2B1 (Fig. 4B, P < 0.05, P < 0.01), which was further confirmed by colony formation assay (Fig. 4C, P < 0.01). Later, TUNEL assay and flow cytometry analysis revealed that BBOX1‐AS1 knockdown‐induced enhancement on cell apoptosis was diminished by SH2B1 overexpression (Fig. 4D,E, P < 0.01). According to wound healing assay, the up‐regulation of SH2B1 offset the repression caused by BBOX1‐AS1 depletion on cell migration (Fig. 4F, P < 0.01). In transwell assay, the invasion hampered by silenced BBOX1‐AS1 was abrogated by SH2B1 overexpression (Fig. 4G, P < 0.01). In brief, BBOX1‐AS1 functioned as a ceRNA to promote CRC progression by targeting the miR‐361‐3p/SH2B1 axis.
Fig. 4

BBOX1‐AS1 promotes CRC progression by sponging miR‐361‐3p and up‐regulating SH2B1. (A) Transfection efficiency of pcDNA3.1/SH2B1 was detected (n = 4). Student’s t‐test. (B, C) The proliferation in CRC cells was determined with the transfection of indicated plasmids through CCK‐8 (two‐way ANOVA) and colony formation assays (one‐way ANOVA) (n = 4). (D, E) TUNEL assay (scale bars, 150 μm) and flow cytometry analysis were applied to evaluate cell apoptosis in each group (n = 4). One‐way ANOVA. (F) Wound healing assay (scale bars, 160 μm) was used to confirm the migration of cells transfected with appointed plasmids (n = 4). One‐way ANOVA. (G) Invasive cells in each group were shown by transwell assay (scale bars, 180 μm) (n = 4). One‐way ANOVA. The error bars indicate SD. *P < 0.05, **P < 0.01 disclosed a statistically significant difference in comparison with the control group.

BBOX1‐AS1 promotes CRC progression by sponging miR‐361‐3p and up‐regulating SH2B1. (A) Transfection efficiency of pcDNA3.1/SH2B1 was detected (n = 4). Student’s t‐test. (B, C) The proliferation in CRC cells was determined with the transfection of indicated plasmids through CCK‐8 (two‐way ANOVA) and colony formation assays (one‐way ANOVA) (n = 4). (D, E) TUNEL assay (scale bars, 150 μm) and flow cytometry analysis were applied to evaluate cell apoptosis in each group (n = 4). One‐way ANOVA. (F) Wound healing assay (scale bars, 160 μm) was used to confirm the migration of cells transfected with appointed plasmids (n = 4). One‐way ANOVA. (G) Invasive cells in each group were shown by transwell assay (scale bars, 180 μm) (n = 4). One‐way ANOVA. The error bars indicate SD. *P < 0.05, **P < 0.01 disclosed a statistically significant difference in comparison with the control group.

Discussion

Previous studies have confirmed the pivotal status of lncRNAs in the process of tumor lesions [14, 15, 16]. Increasing lncRNAs are found to be involved in human tumor progression, including CRC [17, 18]. For example, the increased expression of GHET1 was tested in CRC samples, and CRC cell proliferation and invasion were inhibited on GHET1 knockdown [18]. In addition, down‐regulated PCAT1 induced cell apoptosis, arrested cell growth cycle, repressed proliferation, and hampered cyclins and c‐Myc expression in CRC [19]. In this study, the biological function and mechanism of BBOX1‐AS1 in CRC were investigated, and results implied that BBOX1‐AS1 displayed a considerably up‐regulated expression level in CRC cells. Moreover, with the transfection of sh‐BBOX1‐AS1, CRC cell proliferation, migration and invasion were dramatically restrained, whereas the apoptosis was observably promoted. These discoveries verified the oncogenic property of BBOX1‐AS1 in CRC. Based on the earlier findings, the mechanism mediated by lncRNA needs to be further researched. miRNA, with 22–24 nucleotides in length, was known as a critical regulator in biological processes through being sponged by lncRNA and targeting mRNA [20]. For instance, lncRNA XIST acted as an oncogene to boost CRC cell proliferation and reduce cell apoptosis through sponging miR‐132‐3p, and MAPK1 functioned as a target gene of miR‐132‐3p [21]. lncRNA MIAT, a sponge for miR‐29a‐3p, regulated the biological behaviors of gastric cancer cell by up‐regulating HDAC4 expression [22]. lncRNA CCAT1 activated cisplatin resistance via a mechanism relating to the miR‐130a‐3p/SOX4 axis in non‐small cell lung cancer [23]. With further exploration of the molecular mechanism in this study, we found that BBOX1‐AS1 was mainly distributed in the cytoplasm of CRC cells and functioned as a sponge for miR‐361‐3p. Meanwhile, miR‐361‐3p expression was lowly expressed in CRC cells and negatively modified by BBOX1‐AS1. All of the data suggested that BBOX1‐AS1 exerted the role of tumor facilitator by sponging miR‐361‐3p. SH2B1 was commonly recognized as an oncogene in multiple cancers. For example, SH2B1 was identified as a risk factor in gastric cancer and stimulated its progression [24]. SH2B1 enhanced the EMT process in lung adenocarcinoma through the IRS1/β‐catenin axis [25]. SH2B1 promoted cell proliferation in non‐small cell lung cancer via phosphoinositide 3‐kinase/Akt/mechanistic target of rapamycin signaling cascade [26]. In this study, SH2B1 was found to be highly expressed in CRC cell lines and targeted by miR‐361‐3p. Furthermore, miR‐361‐3p negatively regulated the expression of SH2B1. In conclusion, this research revealed that BBOX1‐AS1 promoted CRC progression by sponging miR‐361‐3p and up‐regulating SH2B1, which suggested a BBOX1‐AS1/miR‐361‐3p/SH2B1 axis in CRC and provided a promising insight for CRC treatment.

Conflict of interest

The authors declare no conflict of interest.

Author contributions

J. Liu conceived and designed the project. JZ and ZX acquired the data. J. Luo and XW analyzed and interpreted the data. J. Liu wrote the paper. All authors approved final manuscript.
  26 in total

1.  Cancer statistics, 2018.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2018-01-04       Impact factor: 508.702

2.  LncRNA HOXD-AS1 promotes melanoma cell proliferation and invasion by suppressing RUNX3 expression.

Authors:  Hailin Zhang; Ming Bai; Ang Zeng; Loubin Si; Nanze Yu; Xiaojun Wang
Journal:  Am J Cancer Res       Date:  2017-12-01       Impact factor: 6.166

3.  Micro RNA-518 inhibits gastric cancer cell growth by inducing apoptosis via targeting MDM2.

Authors:  Changjun Feng; Qingjie Xian; Shuntao Liu
Journal:  Biomed Pharmacother       Date:  2017-11-28       Impact factor: 6.529

Review 4.  [Regulatory roles of non-coding RNAs in cardiomyocyte differentiation].

Authors:  Yumei Wang; Luying Peng; Li Li
Journal:  Zhonghua Yi Xue Yi Chuan Xue Za Zhi       Date:  2016-12-10

5.  Circulating SH2B1 is associated with an increased risk of gastric cancer.

Authors:  Bo Liu; Feng Li; Hong-Peng Zhao; Jing-Bo Chen; Yu-Peng Li; Hai-Hua Yu
Journal:  Oncol Lett       Date:  2018-03-07       Impact factor: 2.967

Review 6.  Long non-coding RNAs on the stage of cervical cancer (Review).

Authors:  Junxue Dong; Manman Su; Weiqin Chang; Kun Zhang; Shuying Wu; Tianmin Xu
Journal:  Oncol Rep       Date:  2017-08-14       Impact factor: 3.906

7.  lncRNA-MIAT regulates cell biological behaviors in gastric cancer through a mechanism involving the miR-29a-3p/HDAC4 axis.

Authors:  Yanfeng Li; Kuan Wang; Yuzhe Wei; Qiang Yao; Qifan Zhang; Hongyan Qu; Guanyu Zhu
Journal:  Oncol Rep       Date:  2017-10-10       Impact factor: 3.906

8.  The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3.

Authors:  Colleen A McHugh; Chun-Kan Chen; Amy Chow; Christine F Surka; Christina Tran; Patrick McDonel; Amy Pandya-Jones; Mario Blanco; Christina Burghard; Annie Moradian; Michael J Sweredoski; Alexander A Shishkin; Julia Su; Eric S Lander; Sonja Hess; Kathrin Plath; Mitchell Guttman
Journal:  Nature       Date:  2015-04-27       Impact factor: 49.962

9.  SH2B1 promotes epithelial-mesenchymal transition through the IRS1/β-catenin signaling axis in lung adenocarcinoma.

Authors:  Shaoqiang Wang; Yuanda Cheng; Yang Gao; Zhiwei He; Wolong Zhou; Ruimin Chang; Zhenzi Peng; Yingying Zheng; Chaojun Duan; Chunfang Zhang
Journal:  Mol Carcinog       Date:  2018-02-20       Impact factor: 4.784

Review 10.  Profiling DNA Methylation Based on Next-Generation Sequencing Approaches: New Insights and Clinical Applications.

Authors:  Daniela Barros-Silva; C Joana Marques; Rui Henrique; Carmen Jerónimo
Journal:  Genes (Basel)       Date:  2018-08-23       Impact factor: 4.096

View more
  12 in total

1.  Transcriptome profiling and co-expression network analysis of lncRNAs and mRNAs in colorectal cancer by RNA sequencing.

Authors:  Mingjie Li; Dandan Guo; Xijun Chen; Xinxin Lu; Xiaoli Huang; Yan'an Wu
Journal:  BMC Cancer       Date:  2022-07-16       Impact factor: 4.638

2.  Long non-coding RNA BBOX1-antisense RNA 1 enhances cell proliferation and migration and suppresses apoptosis in oral squamous cell carcinoma via the miR-3940-3p/laminin subunit gamma 2 axis.

Authors:  Chunguang Zhao; Wei Shi; Min Chen
Journal:  Bioengineered       Date:  2022-04       Impact factor: 6.832

3.  Identification of long non-coding RNA signatures for squamous cell carcinomas and adenocarcinomas.

Authors:  Suyan Tian; Mingbo Tang; Jialin Li; Chi Wang; Wei Liu
Journal:  Aging (Albany NY)       Date:  2020-12-09       Impact factor: 5.682

4.  Hsa_circ_0075960 Serves as a Sponge for miR-361-3p/SH2B1 in Endometrial Carcinoma.

Authors:  Bo Wu; Ailing Ren; Ying Tian; Ruizhen Huang
Journal:  Technol Cancer Res Treat       Date:  2020 Jan-Dec

5.  KLF5-induced BBOX1-AS1 contributes to cell malignant phenotypes in non-small cell lung cancer via sponging miR-27a-5p to up-regulate MELK and activate FAK signaling pathway.

Authors:  Jiang Shi; Chao Yang; Jinlu An; Dexun Hao; Cong Liu; Jumin Liu; Jing Sun; Junguang Jiang
Journal:  J Exp Clin Cancer Res       Date:  2021-04-30

6.  BBOX1-AS1 Accelerates Nasopharyngeal Carcinoma Progression by Sponging miR-3940-3p and Enhancing KPNA2 Upregulation.

Authors:  Haihua Jiang; Qinglong He; Tingyan Liu
Journal:  Cancer Manag Res       Date:  2021-12-08       Impact factor: 3.989

7.  WT1-AS/IGF2BP2 Axis Is a Potential Diagnostic and Prognostic Biomarker for Lung Adenocarcinoma According to ceRNA Network Comprehensive Analysis Combined with Experiments.

Authors:  Mingxi Jia; Yi Shi; Yang Xie; Wen Li; Jing Deng; Da Fu; Jie Bai; Yushui Ma; Zavuga Zuberi; Juan Li; Zheng Li
Journal:  Cells       Date:  2021-12-23       Impact factor: 6.600

8.  Construction of a ceRNA Network and a Prognostic lncRNA Signature associated with Vascular Invasion in Hepatocellular Carcinoma based on Weighted Gene Co-Expression Network Analysis.

Authors:  Haisu Tao; Jiang Li; Junjie Liu; Tong Yuan; Erlei Zhang; Huifang Liang; Zhiyong Huang
Journal:  J Cancer       Date:  2021-05-05       Impact factor: 4.207

9.  High-Throughput MicroRNA Profiling of Vitreoretinal Lymphoma: Vitreous and Serum MicroRNA Profiles Distinct from Uveitis.

Authors:  Teruumi Minezaki; Yoshihiko Usui; Masaki Asakage; Masakatsu Takanashi; Hiroyuki Shimizu; Naoya Nezu; Akitomo Narimatsu; Kinya Tsubota; Kazuhiko Umazume; Naoyuki Yamakawa; Masahiko Kuroda; Hiroshi Goto
Journal:  J Clin Med       Date:  2020-06-12       Impact factor: 4.241

10.  Autophagy-associated circular RNA hsa_circ_0007813 modulates human bladder cancer progression via hsa-miR-361-3p/IGF2R regulation.

Authors:  Zheyu Zhang; Zezhong Mou; Chenyang Xu; Siqi Wu; Xiyu Dai; Xinan Chen; Yuxi Ou; Yiling Chen; Chen Yang; Haowen Jiang
Journal:  Cell Death Dis       Date:  2021-08-07       Impact factor: 8.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.