Bas B L Penning de Vries1, Maarten van Smeden2, Frits R Rosendaal2, Rolf H H Groenwold3. 1. Department of Clinical Epidemiology, Leiden University Medical Center, PO Box 9600, 2300 RC, the Netherlands. Electronic address: B.B.L.Penning_de_Vries@lumc.nl. 2. Department of Clinical Epidemiology, Leiden University Medical Center, PO Box 9600, 2300 RC, the Netherlands. 3. Department of Clinical Epidemiology, Leiden University Medical Center, PO Box 9600, 2300 RC, the Netherlands; Department of Biomedical Data Sciences, Leiden University Medical Center, PO Box 9600, 2300 RC, the Netherlands.
Abstract
OBJECTIVE: Article full texts are often inaccessible via the standard search engines of biomedical literature, such as PubMed and Embase, which are commonly used for systematic reviews. Excluding the full-text bodies from a literature search may result in a small or selective subset of articles being included in the review because of the limited information that is available in only title, abstract, and keywords. This article describes a comparison of search strategies based on a systematic literature review of all articles published in 5 top-ranked epidemiology journals between 2000 and 2017. STUDY DESIGN AND SETTING: Based on a text-mining approach, we studied how nine different methodological topics were mentioned across text fields (title, abstract, keywords, and text body). The following methodological topics were studied: propensity score methods, inverse probability weighting, marginal structural modeling, multiple imputation, Kaplan-Meier estimation, number needed to treat, measurement error, randomized controlled trial, and latent class analysis. RESULTS: In total, 31,641 Hypertext Markup Language (HTML) files were downloaded from the journals' websites. For all methodological topics and journals, at most 50% of articles with a mention of a topic in the text body also mentioned the topic in the title, abstract, or keywords. For several topics, a gradual decrease over calendar time was observed of reporting in the title, abstract, or keywords. CONCLUSION: Literature searches based on title, abstract, and keywords alone may not be sufficiently sensitive for studies of epidemiological research practice. This study also illustrates the potential value of full-text literature searches, provided there is accessibility of full-text bodies for literature searches.
OBJECTIVE: Article full texts are often inaccessible via the standard search engines of biomedical literature, such as PubMed and Embase, which are commonly used for systematic reviews. Excluding the full-text bodies from a literature search may result in a small or selective subset of articles being included in the review because of the limited information that is available in only title, abstract, and keywords. This article describes a comparison of search strategies based on a systematic literature review of all articles published in 5 top-ranked epidemiology journals between 2000 and 2017. STUDY DESIGN AND SETTING: Based on a text-mining approach, we studied how nine different methodological topics were mentioned across text fields (title, abstract, keywords, and text body). The following methodological topics were studied: propensity score methods, inverse probability weighting, marginal structural modeling, multiple imputation, Kaplan-Meier estimation, number needed to treat, measurement error, randomized controlled trial, and latent class analysis. RESULTS: In total, 31,641 Hypertext Markup Language (HTML) files were downloaded from the journals' websites. For all methodological topics and journals, at most 50% of articles with a mention of a topic in the text body also mentioned the topic in the title, abstract, or keywords. For several topics, a gradual decrease over calendar time was observed of reporting in the title, abstract, or keywords. CONCLUSION: Literature searches based on title, abstract, and keywords alone may not be sufficiently sensitive for studies of epidemiological research practice. This study also illustrates the potential value of full-text literature searches, provided there is accessibility of full-text bodies for literature searches.
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