Literature DB >> 31977248

Identification of MMP1 as a Potential Prognostic Biomarker and Correlating with Immune Infiltrates in Cervical Squamous Cell Carcinoma.

Shanshan Zhao1, Mingxin Yu1.   

Abstract

Cervical squamous cell carcinoma (CESC) is a human papillomavirus-driven tumor that the underlying molecular mechanisms are unclear. This study aimed to elucidate the key candidate genes and potential mechanism in CESC by bioinformatics analysis. A total of 132 common differentially expressed genes (DEGs) were identified based on three expression profile data sets. A multivariate Cox proportional regression model was used to develop a four-gene prognostic signature. Mechanistically, the correlationship between MMP1 and tumor-infiltrating lymphocytes was further analyzed. Furthermore, annotations were investigated by Gene Ontology (GO) and The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. Finally, potential drugs for CESC treatment were predicted by Connectivity Map. We profiled four genes (EFNA1, ANLN, MMP1, and ZWINT) with significant prognostic values for CESC. Multiple public available data sets were used for mRNA expression and prognostic characterization. Subsequently, GO and KEGG pathway analyses showed DEGs were mainly enriched in cell cycle, immunity, and metabolic-related pathway. We then conducted an integrated analysis of MMP1, and the expression of MMP1 showed significantly inverse association with the amount of CD8+ T cells, CD4+ T cells, and macrophages infiltration. Our findings suggest the four-gene signature may be associated with prognosis. We further revealed that MMP1 may be a novel biomarker for immunotherapy, and prognostic judgment of patients with cervical cancer.

Entities:  

Keywords:  cervical squamous cell carcinoma; differently expressed genes; molecular docking and potential drugs; tumor-infiltrating lymphocytes; underlying mechanisms

Mesh:

Substances:

Year:  2020        PMID: 31977248     DOI: 10.1089/dna.2019.5129

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  11 in total

1.  An integrated analysis of single-cell and bulk transcriptomics reveals EFNA1 as a novel prognostic biomarker for cervical cancer.

Authors:  Xiaopeng Shen; Meng Li; Yang Lei; Shan Lu; Sufen Wang; Zhongxian Liu; Chunguang Wang; Yun Zhao; Ao Wang; Chao Bi; Guoping Zhu
Journal:  Hum Cell       Date:  2022-01-24       Impact factor: 4.174

2.  Identification of Significant Secreted or Membrane-Located Proteins in Laryngeal Squamous Cell Carcinoma.

Authors:  Li Yan; Chunyan Hu; Yangyang Ji; Lifen Zou; Yang Zhao; Yi Zhu; Xiaoshen Wang
Journal:  J Immunol Res       Date:  2022-05-23       Impact factor: 4.493

3.  High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer.

Authors:  Zhitao Chen; Jiacheng Huang; Mengxia Li; Lele Zhang; Dalong Wan; Shengzhang Lin
Journal:  Medicine (Baltimore)       Date:  2021-03-26       Impact factor: 1.817

4.  Prognostic significance of abnormal matrix collagen remodeling in colorectal cancer based on histologic and bioinformatics analysis.

Authors:  Yuqi Liang; Zhihao Lv; Guohang Huang; Jingchun Qin; Huixuan Li; Feifei Nong; Bin Wen
Journal:  Oncol Rep       Date:  2020-08-11       Impact factor: 3.906

5.  A novel prognostic prediction model based on seven immune-related RNAs for predicting overall survival of patients in early cervical squamous cell carcinoma.

Authors:  Rui Qin; Lu Cao; Cong Ye; Junrong Wang; Ziqian Sun
Journal:  BMC Med Genomics       Date:  2021-02-15       Impact factor: 3.063

6.  Immunogenomic Identification for Predicting the Prognosis of Cervical Cancer Patients.

Authors:  Qun Wang; Aurelia Vattai; Theresa Vilsmaier; Till Kaltofen; Alexander Steger; Doris Mayr; Sven Mahner; Udo Jeschke; Helene Hildegard Heidegger
Journal:  Int J Mol Sci       Date:  2021-02-28       Impact factor: 5.923

7.  Prognostic Role of Matrix Metalloproteinases in Cervical Cancer: A Meta-Analysis.

Authors:  Weiwei Chen; Shenjiao Huang; Kun Shi; Lisha Yi; Yaqiong Liu; Wenjie Liu
Journal:  Cancer Control       Date:  2021 Jan-Dec       Impact factor: 3.302

8.  Hypoxia-Induced ZWINT Mediates Pancreatic Cancer Proliferation by Interacting With p53/p21.

Authors:  Peng Chen; Zhiwei He; Jie Wang; Jian Xu; Xueyi Jiang; Yankun Chen; Xinyuan Liu; Jianxin Jiang
Journal:  Front Cell Dev Biol       Date:  2021-11-24

9.  Identity of MMP1 and its effects on tumor progression in head and neck squamous cell carcinoma.

Authors:  Gehou Zhang; Tieqi Li; Guolin Tan; Yexun Song; Qian Liu; Kai Wang; Jingang Ai; Zheng Zhou; Wei Li
Journal:  Cancer Med       Date:  2022-04-14       Impact factor: 4.711

10.  Comprehensive bioinformatic analysis of MMP1 in hepatocellular carcinoma and establishment of relevant prognostic model.

Authors:  Lei Dai; Joseph Mugaanyi; Xingchen Cai; Mingjun Dong; Caide Lu; Changjiang Lu
Journal:  Sci Rep       Date:  2022-08-10       Impact factor: 4.996

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