Literature DB >> 31975585

Biosynthesis of Nitrogenase Cofactors.

Stefan Burén1, Emilio Jiménez-Vicente2, Carlos Echavarri-Erasun1, Luis M Rubio1.   

Abstract

Nitrogenase harbors three distinct metal prosthetic groups that are required for its activity. The simplest one is a [4Fe-4S] cluster located at the Fe protein nitrogenase component. The MoFe protein component carries an [8Fe-7S] group called P-cluster and a [7Fe-9S-C-Mo-R-homocitrate] group called FeMo-co. Formation of nitrogenase metalloclusters requires the participation of the structural nitrogenase components and many accessory proteins, and occurs both in situ, for the P-cluster, and in external assembly sites for FeMo-co. The biosynthesis of FeMo-co is performed stepwise and involves molecular scaffolds, metallochaperones, radical chemistry, and novel and unique biosynthetic intermediates. This review provides a critical overview of discoveries on nitrogenase cofactor structure, function, and activity over the last four decades.

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Year:  2020        PMID: 31975585      PMCID: PMC7318056          DOI: 10.1021/acs.chemrev.9b00489

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  240 in total

1.  In vitro biosynthesis of iron-molybdenum cofactor and maturation of the nif-encoded apodinitrogenase. Effect of substitution for NifH with site-specifically altered forms of NifH.

Authors:  P Rangaraj; M J Ryle; W N Lanzilotta; P W Ludden; V K Shah
Journal:  J Biol Chem       Date:  1999-07-09       Impact factor: 5.157

2.  Accumulation of 55Fe-labeled precursors of the iron-molybdenum cofactor of nitrogenase on NifH and NifX of Azotobacter vinelandii.

Authors:  P Rangaraj; C Ruttimann-Johnson; V K Shah; P W Ludden
Journal:  J Biol Chem       Date:  2001-02-16       Impact factor: 5.157

3.  SAM domains: uniform structure, diversity of function.

Authors:  Chongwoo A Kim; James U Bowie
Journal:  Trends Biochem Sci       Date:  2003-12       Impact factor: 13.807

4.  NGL viewer: web-based molecular graphics for large complexes.

Authors:  Alexander S Rose; Anthony R Bradley; Yana Valasatava; Jose M Duarte; Andreas Prlic; Peter W Rose
Journal:  Bioinformatics       Date:  2018-11-01       Impact factor: 6.937

5.  Spectroscopic characterization of the isolated iron-molybdenum cofactor (FeMoco) precursor from the protein NifEN.

Authors:  Aaron W Fay; Michael A Blank; Chi Chung Lee; Yilin Hu; Keith O Hodgson; Britt Hedman; Markus W Ribbe
Journal:  Angew Chem Int Ed Engl       Date:  2011-07-01       Impact factor: 15.336

Review 6.  Respiratory protection of nitrogenase activity in Azotobacter vinelandii--roles of the terminal oxidases.

Authors:  R K Poole; S Hill
Journal:  Biosci Rep       Date:  1997-06       Impact factor: 3.840

7.  Nucleotide-iron-sulfur cluster signal transduction in the nitrogenase iron-protein: the role of Asp125.

Authors:  D Wolle; D R Dean; J B Howard
Journal:  Science       Date:  1992-11-06       Impact factor: 47.728

8.  The three-dimensional structure of the core domain of Naf Y from Azotobacter vinelandii determined at 1.8-A resolution.

Authors:  David H Dyer; Luis M Rubio; James B Thoden; Hazel M Holden; Paul W Ludden; Ivan Rayment
Journal:  J Biol Chem       Date:  2003-05-16       Impact factor: 5.157

9.  Reconstruction and minimal gene requirements for the alternative iron-only nitrogenase in Escherichia coli.

Authors:  Jianguo Yang; Xiaqing Xie; Xia Wang; Ray Dixon; Yi-Ping Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-19       Impact factor: 11.205

10.  The Pfam protein families database in 2019.

Authors:  Sara El-Gebali; Jaina Mistry; Alex Bateman; Sean R Eddy; Aurélien Luciani; Simon C Potter; Matloob Qureshi; Lorna J Richardson; Gustavo A Salazar; Alfredo Smart; Erik L L Sonnhammer; Layla Hirsh; Lisanna Paladin; Damiano Piovesan; Silvio C E Tosatto; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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  34 in total

1.  Synthesis of nitrogenase by Paenibacillus sabinae T27 in presence of high levels of ammonia during anaerobic fermentation.

Authors:  Qin Li; Xiaojuan He; Pengxi Liu; Haowei Zhang; Mingyang Wang; Sanfeng Chen
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-21       Impact factor: 4.813

2.  Postbiosynthetic modification of a precursor to the nitrogenase iron-molybdenum cofactor.

Authors:  Suppachai Srisantitham; Edward D Badding; Daniel L M Suess
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-08       Impact factor: 11.205

Review 3.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

4.  Reversible Alkyl-Group Migration between Iron and Sulfur in [Fe4S4] Clusters.

Authors:  Mengshan Ye; Alexandra C Brown; Daniel L M Suess
Journal:  J Am Chem Soc       Date:  2022-07-13       Impact factor: 16.383

5.  A complete biomimetic iron-sulfur cubane redox series.

Authors:  Liam Grunwald; Martin Clémancey; Daniel Klose; Lionel Dubois; Serge Gambarelli; Gunnar Jeschke; Michael Wörle; Geneviève Blondin; Victor Mougel
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-26       Impact factor: 12.779

6.  Assignment of protonated R-homocitrate in extracted FeMo-cofactor of nitrogenase via vibrational circular dichroism spectroscopies.

Authors:  Lan Deng; Hongxin Wang; Christie H Dapper; William E Newton; Sergey Shilov; Shunlin Wang; Stephen P Cramer; Zhao-Hui Zhou
Journal:  Commun Chem       Date:  2020-10-28

Review 7.  The Spectroscopy of Nitrogenases.

Authors:  Casey Van Stappen; Laure Decamps; George E Cutsail; Ragnar Bjornsson; Justin T Henthorn; James A Birrell; Serena DeBeer
Journal:  Chem Rev       Date:  2020-04-02       Impact factor: 60.622

8.  Gene Fitness of Azotobacter vinelandii under Diazotrophic Growth.

Authors:  Carolann M Knutson; Meghan N Pieper; Brett M Barney
Journal:  J Bacteriol       Date:  2021-09-27       Impact factor: 3.490

9.  Functional analysis of multiple nifB genes of Paenibacillus strains in synthesis of Mo-, Fe- and V-nitrogenases.

Authors:  Qin Li; Haowei Zhang; Liqun Zhang; Sanfeng Chen
Journal:  Microb Cell Fact       Date:  2021-07-19       Impact factor: 5.328

10.  [2Fe-2S] Cluster Supported by Redox-Active o-Phenylenediamide Ligands and Its Application toward Dinitrogen Reduction.

Authors:  Qiuming Liang; Joshua C DeMuth; Aleksa Radović; Nikki J Wolford; Michael L Neidig; Datong Song
Journal:  Inorg Chem       Date:  2021-05-27       Impact factor: 5.436

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