Literature DB >> 31969484

Deep phenotyping during pregnancy for predictive and preventive medicine.

Alison G Paquette1, Leroy Hood1, Nathan D Price1, Yoel Sadovsky2.   

Abstract

Deep phenotyping during pregnancy offers an opportunity to define the antecedents of lifelong health and wellness, and to improve pregnancy outcomes.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Year:  2020        PMID： 31969484      PMCID： PMC7268934          DOI： 10.1126/scitranslmed.aay1059

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN： 1946-6234            Impact factor:   17.956


  10 in total

Review 1.  Pre-eclampsia: pathophysiology and clinical implications.

Authors:  Graham J Burton; Christopher W Redman; James M Roberts; Ashley Moffett
Journal:  BMJ       Date:  2019-07-15

Review 2.  Effect of in utero and early-life conditions on adult health and disease.

Authors:  Peter D Gluckman; Mark A Hanson; Cyrus Cooper; Kent L Thornburg
Journal:  N Engl J Med       Date:  2008-07-03       Impact factor: 91.245

3.  A wellness study of 108 individuals using personal, dense, dynamic data clouds.

Authors:  Nathan D Price; Andrew T Magis; John C Earls; Gustavo Glusman; Roie Levy; Christopher Lausted; Daniel T McDonald; Ulrike Kusebauch; Christopher L Moss; Yong Zhou; Shizhen Qin; Robert L Moritz; Kristin Brogaard; Gilbert S Omenn; Jennifer C Lovejoy; Leroy Hood
Journal:  Nat Biotechnol       Date:  2017-07-17       Impact factor: 54.908

4.  Genetic Associations with Gestational Duration and Spontaneous Preterm Birth.

Authors:  Ge Zhang; Bjarke Feenstra; Jonas Bacelis; Xueping Liu; Lisa M Muglia; Julius Juodakis; Daniel E Miller; Nadia Litterman; Pan-Pan Jiang; Laura Russell; David A Hinds; Youna Hu; Matthew T Weirauch; Xiaoting Chen; Arun R Chavan; Günter P Wagner; Mihaela Pavličev; Mauris C Nnamani; Jamie Maziarz; Minna K Karjalainen; Mika Rämet; Verena Sengpiel; Frank Geller; Heather A Boyd; Aarno Palotie; Allison Momany; Bruce Bedell; Kelli K Ryckman; Johanna M Huusko; Carmy R Forney; Leah C Kottyan; Mikko Hallman; Kari Teramo; Ellen A Nohr; George Davey Smith; Mads Melbye; Bo Jacobsson; Louis J Muglia
Journal:  N Engl J Med       Date:  2017-09-06       Impact factor: 91.245

5.  Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy.

Authors:  Mohammad Sajjad Ghaemi; Daniel B DiGiulio; Kévin Contrepois; Benjamin Callahan; Thuy T M Ngo; Brittany Lee-McMullen; Benoit Lehallier; Anna Robaczewska; David Mcilwain; Yael Rosenberg-Hasson; Ronald J Wong; Cecele Quaintance; Anthony Culos; Natalie Stanley; Athena Tanada; Amy Tsai; Dyani Gaudilliere; Edward Ganio; Xiaoyuan Han; Kazuo Ando; Leslie McNeil; Martha Tingle; Paul Wise; Ivana Maric; Marina Sirota; Tony Wyss-Coray; Virginia D Winn; Maurice L Druzin; Ronald Gibbs; Gary L Darmstadt; David B Lewis; Vahid Partovi Nia; Bruno Agard; Robert Tibshirani; Garry Nolan; Michael P Snyder; David A Relman; Stephen R Quake; Gary M Shaw; David K Stevenson; Martin S Angst; Brice Gaudilliere; Nima Aghaeepour
Journal:  Bioinformatics       Date:  2019-01-01       Impact factor: 6.937

6.  Genomic and molecular characterization of preterm birth.

Authors:  Theo A Knijnenburg; Joseph G Vockley; Nyasha Chambwe; David L Gibbs; Crystal Humphries; Kathi C Huddleston; Elisabeth Klein; Prachi Kothiyal; Ryan Tasseff; Varsha Dhankani; Dale L Bodian; Wendy S W Wong; Gustavo Glusman; Denise E Mauldin; Michael Miller; Joseph Slagel; Summer Elasady; Jared C Roach; Roger Kramer; Kalle Leinonen; Jasper Linthorst; Rajiv Baveja; Robin Baker; Benjamin D Solomon; Greg Eley; Ramaswamy K Iyer; George L Maxwell; Brady Bernard; Ilya Shmulevich; Leroy Hood; John E Niederhuber
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-04       Impact factor: 11.205

7.  Genetic Predisposition Impacts Clinical Changes in a Lifestyle Coaching Program.

Authors:  Niha Zubair; Matthew P Conomos; Leroy Hood; Gilbert S Omenn; Nathan D Price; Bonnie J Spring; Andrew T Magis; Jennifer C Lovejoy
Journal:  Sci Rep       Date:  2019-05-02       Impact factor: 4.379

8.  A longitudinal big data approach for precision health.

Authors:  Sophia Miryam Schüssler-Fiorenza Rose; Kévin Contrepois; Kegan J Moneghetti; Wenyu Zhou; Tejaswini Mishra; Samson Mataraso; Orit Dagan-Rosenfeld; Ariel B Ganz; Jessilyn Dunn; Daniel Hornburg; Shannon Rego; Dalia Perelman; Sara Ahadi; M Reza Sailani; Yanjiao Zhou; Shana R Leopold; Jieming Chen; Melanie Ashland; Jeffrey W Christle; Monika Avina; Patricia Limcaoco; Camilo Ruiz; Marilyn Tan; Atul J Butte; George M Weinstock; George M Slavich; Erica Sodergren; Tracey L McLaughlin; Francois Haddad; Michael P Snyder
Journal:  Nat Med       Date:  2019-05-08       Impact factor: 53.440

9.  Noninvasive blood tests for fetal development predict gestational age and preterm delivery.

Authors:  Thuy T M Ngo; Mira N Moufarrej; Marie-Louise H Rasmussen; Joan Camunas-Soler; Wenying Pan; Jennifer Okamoto; Norma F Neff; Keli Liu; Ronald J Wong; Katheryne Downes; Robert Tibshirani; Gary M Shaw; Line Skotte; David K Stevenson; Joseph R Biggio; Michal A Elovitz; Mads Melbye; Stephen R Quake
Journal:  Science       Date:  2018-06-08       Impact factor: 47.728

10.  Use of wearable sensors for pregnancy health and environmental monitoring: Descriptive findings from the perspective of patients and providers.

Authors:  Jennifer Runkle; Maggie Sugg; Danielle Boase; Shelley L Galvin; Carol C Coulson
Journal:  Digit Health       Date:  2019-02-06
  10 in total
  8 in total

1.  Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions.

Authors:  Anthony Culos; Amy S Tsai; Natalie Stanley; Martin Becker; Mohammad S Ghaemi; David R McIlwain; Ramin Fallahzadeh; Athena Tanada; Huda Nassar; Camilo Espinosa; Maria Xenochristou; Edward Ganio; Laura Peterson; Xiaoyuan Han; Ina A Stelzer; Kazuo Ando; Dyani Gaudilliere; Thanaphong Phongpreecha; Ivana Marić; Alan L Chang; Gary M Shaw; David K Stevenson; Sean Bendall; Kara L Davis; Wendy Fantl; Garry P Nolan; Trevor Hastie; Robert Tibshirani; Martin S Angst; Brice Gaudilliere; Nima Aghaeepour
Journal:  Nat Mach Intell       Date:  2020-10-12

2.  Advancing human health in the decade ahead: pregnancy as a key window for discovery: A Burroughs Wellcome Fund Pregnancy Think Tank.

Authors:  Yoel Sadovsky; Sam Mesiano; Graham J Burton; Michelle Lampl; Jeffrey C Murray; Rachel M Freathy; Anita Mahadevan-Jansen; Ashley Moffett; Nathan D Price; Paul H Wise; Derek E Wildman; Ralph Snyderman; Nigel Paneth; John Anthony Capra; Marcelo A Nobrega; Yaacov Barak; Louis J Muglia
Journal:  Am J Obstet Gynecol       Date:  2020-06-19       Impact factor: 8.661

3.  Multiomics Characterization of Preterm Birth in Low- and Middle-Income Countries.

Authors:  Fyezah Jehan; Sunil Sazawal; Abdullah H Baqui; Muhammad Imran Nisar; Usha Dhingra; Rasheda Khanam; Muhammad Ilyas; Arup Dutta; Dipak K Mitra; Usma Mehmood; Saikat Deb; Arif Mahmud; Aneeta Hotwani; Said Mohammed Ali; Sayedur Rahman; Ambreen Nizar; Shaali Makame Ame; Mamun Ibne Moin; Sajid Muhammad; Aishwarya Chauhan; Nazma Begum; Waqasuddin Khan; Sayan Das; Salahuddin Ahmed; Tarik Hasan; Javairia Khalid; Syed Jafar Raza Rizvi; Mohammed Hamad Juma; Nabidul Haque Chowdhury; Furqan Kabir; Fahad Aftab; Abdul Quaiyum; Alexander Manu; Sachiyo Yoshida; Rajiv Bahl; Anisur Rahman; Jesmin Pervin; Jennifer Winston; Patrick Musonda; Jeffrey S A Stringer; James A Litch; Mohammad Sajjad Ghaemi; Mira N Moufarrej; Kévin Contrepois; Songjie Chen; Ina A Stelzer; Natalie Stanley; Alan L Chang; Ghaith Bany Hammad; Ronald J Wong; Candace Liu; Cecele C Quaintance; Anthony Culos; Camilo Espinosa; Maria Xenochristou; Martin Becker; Ramin Fallahzadeh; Edward Ganio; Amy S Tsai; Dyani Gaudilliere; Eileen S Tsai; Xiaoyuan Han; Kazuo Ando; Martha Tingle; Ivana Maric; Paul H Wise; Virginia D Winn; Maurice L Druzin; Ronald S Gibbs; Gary L Darmstadt; Jeffrey C Murray; Gary M Shaw; David K Stevenson; Michael P Snyder; Stephen R Quake; Martin S Angst; Brice Gaudilliere; Nima Aghaeepour
Journal:  JAMA Netw Open       Date:  2020-12-01

Review 4.  Investigating Pregnancy and Its Complications Using Circulating Cell-Free RNA in Women's Blood During Gestation.

Authors:  Mira N Moufarrej; Ronald J Wong; Gary M Shaw; David K Stevenson; Stephen R Quake
Journal:  Front Pediatr       Date:  2020-12-14       Impact factor: 3.418

5.  Integrated multimodal artificial intelligence framework for healthcare applications.

Authors:  Luis R Soenksen; Yu Ma; Cynthia Zeng; Leonard Boussioux; Kimberly Villalobos Carballo; Liangyuan Na; Holly M Wiberg; Michael L Li; Ignacio Fuentes; Dimitris Bertsimas
Journal:  NPJ Digit Med       Date:  2022-09-20

6.  Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth.

Authors:  Abin Abraham; Brian Le; Idit Kosti; Peter Straub; Digna R Velez-Edwards; Lea K Davis; J M Newton; Louis J Muglia; Antonis Rokas; Cosmin A Bejan; Marina Sirota; John A Capra
Journal:  BMC Med       Date:  2022-09-28       Impact factor: 11.150

Review 7.  Regulation of maternal-fetal metabolic communication.

Authors:  Caitlyn E Bowman; Zoltan Arany; Michael J Wolfgang
Journal:  Cell Mol Life Sci       Date:  2020-10-21       Impact factor: 9.261

8.  Pregnancy cohorts and biobanking in sub-Saharan Africa: a systematic review.

Authors:  Jeffrey N Bone; Kelly Pickerill; Mai-Lei Woo Kinshella; Marianne Vidler; Rachel Craik; Lucilla Poston; William Stones; Esperanca Sevene; Marleen Temmerman; Angela Koech Etyang; Anna Roca; Donna Russell; Rachel M Tribe; Peter von Dadelszen; Laura A Magee
Journal:  BMJ Glob Health       Date:  2020-11
  8 in total

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