Literature DB >> 31965982

Histone H2A isoforms: Potential implications in epigenome plasticity and diseases in eukaryotes.

Sanket Shah1, Tripti Verma, Mudasir Rashid, Nikhil Gadewal, Sanjay Gupta.   

Abstract

Epigenetic mechanisms including the post-translational modifications of histones, incorporation of histone variants and DNA methylation have been suggested to play an important role in genome plasticity by allowing the cellular environment to define gene expression and the phenotype of an organism. Studies over the past decade have elucidated how these epigenetic mechanisms are significant in orchestrating various biological processes and contribute to different pathophysiological states. However, the role of histone isoforms and their impact on different phenotypes and physiological processes associated with diseases are not fully clear. This review is focussed on the recent advances in our understanding of the complexity of eukaryotic H2A isoforms and their roles in defining nucleosome organization. We elaborate on their potential roles in genomic complexity and regulation of gene expression, and thereby on their overall contribution towards cellular phenotype and development of diseases.

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Year:  2020        PMID: 31965982

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  46 in total

1.  MAPT (Tau) expression is a biomarker for an increased rate of survival in pediatric neuroblastoma.

Authors:  Saif Zaman; Boris I Chobrutskiy; George Blanck
Journal:  Cell Cycle       Date:  2018-11-18       Impact factor: 4.534

2.  Formation of MacroH2A-containing senescence-associated heterochromatin foci and senescence driven by ASF1a and HIRA.

Authors:  Rugang Zhang; Maxim V Poustovoitov; Xiaofen Ye; Hidelita A Santos; Wei Chen; Sally M Daganzo; Jan P Erzberger; Ilya G Serebriiskii; Adrian A Canutescu; Roland L Dunbrack; John R Pehrson; James M Berger; Paul D Kaufman; Peter D Adams
Journal:  Dev Cell       Date:  2005-01       Impact factor: 12.270

Review 3.  Quickly evolving histones, nucleosome stability and chromatin folding: all about histone H2A.Bbd.

Authors:  Rodrigo González-Romero; Josefina Méndez; Juan Ausió; José M Eirín-López
Journal:  Gene       Date:  2008-02-16       Impact factor: 3.688

4.  A simple and versatile system for the ATP-dependent assembly of chromatin.

Authors:  Mai T Khuong; Jia Fei; Grisel Cruz-Becerra; James T Kadonaga
Journal:  J Biol Chem       Date:  2017-10-05       Impact factor: 5.157

5.  A Potential New Mechanism of Arsenic Carcinogenesis: Depletion of Stem-Loop Binding Protein and Increase in Polyadenylated Canonical Histone H3.1 mRNA.

Authors:  Jason Brocato; Danqi Chen; Jianli Liu; Lei Fang; Chunyuan Jin; Max Costa
Journal:  Biol Trace Elem Res       Date:  2015-04-21       Impact factor: 3.738

6.  Analysis of gene expression in cyclooxygenase-2-overexpressed human osteosarcoma cell lines.

Authors:  Jeong A Han; Ji-Yeon Kim; Jong-Il Kim
Journal:  Genomics Inform       Date:  2014-12-31

Review 7.  Histone variants: dynamic punctuation in transcription.

Authors:  Christopher M Weber; Steven Henikoff
Journal:  Genes Dev       Date:  2014-04-01       Impact factor: 11.361

8.  A generic cycling hypoxia-derived prognostic gene signature: application to breast cancer profiling.

Authors:  Romain Boidot; Samuel Branders; Thibault Helleputte; Laila Illan Rubio; Pierre Dupont; Olivier Feron
Journal:  Oncotarget       Date:  2014-08-30

Review 9.  Abnormal Epigenetic Regulation of Immune System during Aging.

Authors:  Miriam G Jasiulionis
Journal:  Front Immunol       Date:  2018-02-12       Impact factor: 7.561

Review 10.  Replication-dependent histone isoforms: a new source of complexity in chromatin structure and function.

Authors:  Rajbir Singh; Emily Bassett; Arnab Chakravarti; Mark R Parthun
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

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  4 in total

Review 1.  BRCA1/BARD1 is a nucleosome reader and writer.

Authors:  Samuel R Witus; Weixing Zhao; Peter S Brzovic; Rachel E Klevit
Journal:  Trends Biochem Sci       Date:  2022-03-26       Impact factor: 14.264

2.  Effects of H2A.B incorporation on nucleosome structures and dynamics.

Authors:  Havva Kohestani; Jeff Wereszczynski
Journal:  Biophys J       Date:  2021-02-18       Impact factor: 4.033

3.  BRCA1/BARD1 site-specific ubiquitylation of nucleosomal H2A is directed by BARD1.

Authors:  Samuel R Witus; Anika L Burrell; Daniel P Farrell; Jianming Kang; Meiling Wang; Jesse M Hansen; Alex Pravat; Lisa M Tuttle; Mikaela D Stewart; Peter S Brzovic; Champak Chatterjee; Weixing Zhao; Frank DiMaio; Justin M Kollman; Rachel E Klevit
Journal:  Nat Struct Mol Biol       Date:  2021-02-15       Impact factor: 15.369

4.  HISTome2: a database of histone proteins, modifiers for multiple organisms and epidrugs.

Authors:  Sanket G Shah; Tushar Mandloi; Pooja Kunte; Abhiram Natu; Mudasir Rashid; Divya Reddy; Nikhil Gadewal; Sanjay Gupta
Journal:  Epigenetics Chromatin       Date:  2020-08-03       Impact factor: 4.954

  4 in total

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