| Literature DB >> 31963335 |
Sonia Del Prete1, Andrea Angeli2, Cynthia Ghobril3, Julien Hitce3, Cécile Clavaud3, Xavier Marat3, Claudiu T Supuran2, Clemente Capasso1.
Abstract
The critical CO2 hydration reaction to bicarbonate and protons is catalyzed by carbonic anhydrases (CAs, EC 4.2.1.1). Their physiological role is to assist the transport of the CO2 and HCO3- at the cellular level, which will not be ensured by the low velocity of the uncatalyzed reaction. CA inhibition may impair the growth of microorganisms. In the yeasts, Candida albicans and Malassezia globosa, the activity of the unique β-CA identified in their genomes was demonstrated to be essential for growth of the pathogen. Here, we decided to investigate the sulfonamide inhibition profile of the homologous β-CA (MreCA) identified in the genome of Malassezia restricta, an opportunistic pathogen triggering dandruff and seborrheic dermatitis. Among 40 investigated derivatives, the best MreCA sulfonamide inhibitors were dorzolamide, brinzolamide, indisulam, valdecoxib, sulthiam, and acetazolamide (KI < 1.0 μM). The MreCA inhibition profile was different from those of the homologous enzyme from Malassezia globosa (MgCA) and the human isoenzymes (hCA I and hCA II). These results might be useful to for designing CA inhibitor scaffolds that may selectively inhibit the dandruff-producing fungi.Entities:
Keywords: CA inhibitors; Malassezia globosa; Malassezia restricta; carbonic anhydrases; dandruff; metalloenzymes; seborrheic dermatitis; sulfonamides
Year: 2020 PMID: 31963335 PMCID: PMC7023381 DOI: 10.3390/metabo10010039
Source DB: PubMed Journal: Metabolites ISSN: 2218-1989
Figure 1SDS-PAGE analysis. The overexpression of the MreCA fusion protein was obtained using 1 mM IPTG. The overexpressed fungal CA is well evident in lane 2 at the molecular weight of 27 kDa, while it was absent in lane 1, which contained the cell lysate supernatant before IPTG induction. After induction, the soluble MreCA was passed through the HisTrap FF column to obtain a highly pure and homogenous MreCA. Legend: Lane 1, molecular markers; Lane 2, cell lysate supernatant; Lane 3, IPTG induction; Lane 4, purified MreCA. The red box identifies the height in the gel corresponding to 27 kDa.
Figure 2Protonography analysis. Developed protonogram showing the CO2 hydratase activity of MreCA, MgCA, and bCA directly on the SDS-PAGE. Legend: Lane 1, molecular markers; Lane 2, purified MreCA; Lane 3 and 4, purified MgCA and commercial bovine CA, respectively. These two enzymes were used as positive controls. The red boxes identified the yellow bands at 27 and 29 kDa.
MreCA kinetic parameters compared with those calculated for the two human isoforms hCA I and II (α-class), and the fungal β-CAs from different species. The CO2 hydration reaction was followed at 25 °C, in 20 mM Tris buffer and 20 mM NaClO4, pH 8.3.
| Organisms | Acronym | Class | Kcat (s−1) | kcat/KM (M−1·s−1) |
|---|---|---|---|---|
|
| hCA I a | 𝛼 | 2.0 × 105 | 5.0 × 107 |
| hCA II a | 𝛼 | 1.4 × 106 | 1.5 × 108 | |
|
| MreCA | β | 1.06 × 106 | 1.07 × 108 |
|
| MgCA b | β | 9.2 × 105 | 8.3 × 107 |
|
| Can2 c | β | 3.9 × 105 | 4.3 × 107 |
|
| CaNce103 d | β | 8.0 × 105 | 9.7 × 107 |
|
| CgNce103 e | β | 3.8 × 105 | 4.8 × 107 |
aFrom ref. 39; b From ref. 24; c From ref. 32; d From ref. 34; e From ref. 38.
Figure 3The 40 compounds. Thirty-nine sulfonamides and one sulfamate (TPM) were used to determine the MreCA inhibition profile.
Acronyms and commercial names of the CAI clinically used drugs.
| CAI Acronym | Commercial Name |
|---|---|
|
| Acetazolamide |
|
| Methazolamide |
|
| Ethoxzolamide |
|
| Dichlorophenamide |
|
| Dorzolamide |
|
| Brinzolamide |
|
| Benzolamide |
|
| Zonisamide |
|
| Sulthiame |
|
| Famotidine |
|
| Topiramate |
|
| Sulpiride |
|
| Indisulam |
|
| Celecoxib |
|
| Valdecoxib |
|
| Saccharin |
|
| Hydrochlorothiazide |
Inhibition data of human isoenzymes (CA I and CA II) and fungal CAs (MreCA and MgCA) with the thirty-nine sulfonamides and one sulfamate by a stopped-flow CO2 hydrase assay.
| KI (µM) * | ||||
|---|---|---|---|---|
| Compound | MreCA | MgCA a | hCA I b | hCA II b |
|
| 4.12 | 9.8 | 28.0 | 0.300 |
|
| 4.62 | 0.245 | 25.0 | 0.240 |
|
| >10 | 0.152 | 0.079 | 0.008 |
|
| 4.04 | 6.74 | 78.5 | 0.320 |
|
| >10 | 0.174 | 25.0 | 0.170 |
|
| >10 | 0.079 | 21.0 | 0.160 |
|
| 4.59 | 0.116 | 8.3 | 0.060 |
|
| >10 | 0.121 | 9.8 | 0.110 |
|
| >10 | 0.349 | 6.5 | 0.040 |
|
| >10 | 0.543 | 7.3 | 0.054 |
|
| 6.76 | 0.09 | 5.8 | 0.063 |
|
| >10 | 0.092 | 8.4 | 0.075 |
|
| >10 | 79.0 | 8.6 | 0.060 |
|
| >10 | 85.0 | 9.3 | 0.019 |
|
| >10 | 0.236 | 5.5 | 0.080 |
|
| 6.51 | 0.104 | 9.5 | 0.094 |
|
| >10 | 0.063 | 21.0 | 0.125 |
|
| >10 | 0.068 | 0.164 | 0.046 |
|
| 7.79 | 35.0 | 0.109 | 0.033 |
|
| 0.91 | 0.234 | 0.006 | 0.002 |
|
| 7.40 | 0.118 | 0.069 | 0.011 |
|
| 3.74 | 0.094 | 0.0164 | 0.046 |
|
| >10 | 45.3 | 0.109 | 0.033 |
|
| >10 | 2.56 | 0.095 | 0.030 |
|
| 3.90 | 74.55 | 0.05 | 0.014 |
|
| 3.79 | 38.0 | 0.025 | 0.008 |
|
| 0.81 | 79.0 | 50.0 | 0.009 |
|
| 0.70 | 84.0 | 45.0 | 0.003 |
|
| 7.15 | 0.482 | 0.015 | 0.009 |
|
| 3.83 | 1.46 | 0.25 | 0.01 |
|
| 4.85 | 0.32 | 1.2 | 0.04 |
|
| 0.87 | n.d. | 0.031 | 0.015 |
|
| >10 | 7.65 | 0.056 | 0.035 |
|
| 1.4 | 34.8 | 50.0 | 0.021 |
|
| 0.77 | 31.5 | 54.0 | 0.043 |
|
| 0.67 | n.d. | 0.374 | 0.009 |
|
| 6.2 | n.d. | 18.54 | 5.959 |
|
| 8.5 | n.d. | 0.328 | 0.29 |
|
| >10 | n.d. | 0.922 c | 0.058 c |
|
| 3.06 | 0.346 | 1.2 | 0.038 |
|
| 0.1 | 76.0 | 0.25 | 0.012 |
* Mean from three different assays, by a stopped flow technique (errors were in the range of ± 5–10% of the reported values).a From ref. 24; b From ref. 39; c From ref. 40; n.d.: not detected.