| Literature DB >> 31960617 |
Il Tae Hwang1, Yusuke Mizuno2, Naoko Amano2, Hye Jin Lee1, Young Suk Shim1, Hyo-Kyoung Nam3, Young-Jun Rhie3, Seung Yang1, Kee-Hyoung Lee3, Tomonobu Hasegawa2, Min Jae Kang1.
Abstract
BACKGROUND: C-type natriuretic peptide (CNP, NPPC) and its receptor, natriuretic peptide receptor-B (NPR-B, NPR2), are critical for endochondral ossification. A monoallelic NPR2 mutation has been suggested to mildly impair long bone growth. This study was performed to identify the NPR2 mutations in Korean patients with idiopathic short stature (ISS).Entities:
Keywords: zzm321990NPR2zzm321990; idiopathic short stature; natriuretic peptide receptor-B
Year: 2020 PMID: 31960617 PMCID: PMC7057090 DOI: 10.1002/mgg3.1146
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.183
Clinical characteristics of subjects
| Total ( | Male ( | Female ( | |
|---|---|---|---|
| Age | 8.0 ± 3.2 | 8.3 ± 3.3 | 7.7 ± 3.1 |
| Height | −2.65 ± 0.40 | −2.57 ± 0.33 | −2.73 ± 0.45 |
| Weight | −1.99 ± 0.73 | −2.02 ± 0.74 | −1.96 ± 0.72 |
| BMI | −0.59 ± 0.95 | −0.71 ± 0.95 | −0.45 ± 0.95 |
| BA‐CA (year) | −1.5 ± 1.1 | −1.7 ± 1.2 | −1.3 ± 1.0 |
| Gestational age (year) | 39.4 ± 1.0 | 39.3 ± 1.1 | 39.4 ± 1.0 |
| Birth weight (kg) | 3.1 ± 0.3 | 3.1 ± 0.3 | 3.0 ± 0.3 |
| Father's height | −0.96 ± 1.02 | −0.86 ± 1.03 | −1.07 ± 1.00 |
| Mother's height | −1.04 ± 1.05 | −1.11 ± 1.10 | −0.97 ± 1.00 |
| MPH | −0.99 ± 0.77 | −0.95 ± 0.77 | −1.04 ± 0.79 |
| Peak GH (ng/ml) | 16.3 ± 10.2 | 15.4 ± 8.0 | 17.4 ± 12.2 |
| IGF‐1 SDS | −0.79 ± 0.73 | −0.68 ± 0.86 | −0.89 ± 0.57 |
| IGFBP‐3 SDS | 1.99 ± 1.81 | 1.87 ± 1.90 | 1.88 ± 1.72 |
| Pre‐GH treatment GV (cm/year) | 5.0 ± 1.1 | 4.8 ± 1.2 | 5.2 ± 1.0 |
| Post‐GH treatment GV(cm/year) | 8.9 ± 1.6 | 8.7 ± 1.8 | 9.1 ± 1.4 |
Data are expressed as mean±standard deviation.
Abbreviations: BA, bone age; BMI, body mass index; CA, chronological age; GH, growth hormone; GV, growth velocity; IGF‐1, insulin‐like growth factor‐1; IGFBP‐3, insulin‐like growth factor‐binding protein‐3; MPH, mid‐parental height; SDS, standard deviation score.
Growth velocity during the first year of GH treatment.
Four identified NPR2 variants
| Variant | Protein | Exon # | Location in receptor protein | SNP # | Polyphen‐2 score | Mutation taster | Mutation assessor | SNPs and GO | ACMG/AMP: InterVar‐adjusted |
|---|---|---|---|---|---|---|---|---|---|
| c.2359C>T | R787W | Exon 15 | Kinase homology domain | rs114147262 | 0.998 |
Heterozygous in TGP or ExAC Minor allele frequency 0.16% | Medium (score, 3.14) | Disease | US |
| c.2762G>A | R921Q | Exon 19 | Guanylyl cyclase domain | rs770276670 | 0.997 | Protein features (might be) affected | Medium (score, 2.30) | Disease | P |
| c.1483C>T | R495C | Exon 8 | Transmembrane domain | novel | 0.999 | Protein features (might be) affected | Medium (score, 2.57) | Disease | P |
| c.1792T>A | Y598N | Exon 11 | Kinase homology domain | novel | 1.000 | Protein features (might be) affected | High (score, 4.31) | Disease | P |
Abbreviations: ACMG/AMP, American College of Medical Genetics/Association for Molecular Pathology; ExAC, exome aggregation consortium; P, pathogenic; SNP, single‐nucleotide polymorphism; TGP, 1000 genome project; US, uncertain significance.
Figure 1In vitro functional analysis results. (a) COS‐7 cells were transfected with empty vector (EV), hemagglutinin (HA)‐wild type (WT)‐NPR‐B, HA‐R110C‐NPR‐B, HA‐R495C‐NPR‐B, or HA‐Y598N‐NPR‐B. 100 nM of CNP were treated and stimulated cGMP concentrations were expressed as mean and standard error of mean. EV‐, HA‐R110C‐, HA‐R495C‐, or HA‐Y598N‐transfected cells showed significantly decreased cGMP production compared to HA‐WT‐NPR‐B‐transfected cells (all p < .05). (b) To confirm a dominant‐negative effect of the novel NPR‐B mutants, HA‐R495C or HA‐Y598N were coexpressed with the WT. Coexpressed mutant (R495C or Y598N) and WT‐transfected cells showed significant decrease in cGMP production compared to coexpressed EV‐ and WT‐transfected cells (p < .05)
Clinical characteristics of four ISS subjects with identified NPR2 heterozygous variants
| Case 1 | Case 2 | Case 3 | |
|---|---|---|---|
| Variant | c.2762G>A | c.1483C>T | c.1792T>A |
| Sex | M | M | M |
| Before GH treatment | |||
| Age (years) | 10.3 | 9.5 | 12.1 |
| Height | −2.57 | −2.49 | −2.77 |
| BMI | −1.19 | −0.86 | 0.43 |
| BA‐CA (years) | −0.8 | −2.0 | −2.6 |
| Peak GH (ng/ml) | NA | 23.6 | 7.3 |
| IGF‐1 SDS | −1.05 | 1.59 | −1.23 |
| IGFBP‐3 SDS | −1.62 | 4.53 | −0.88 |
| Pre‐GH treatment GV (cm/year) | 4.5 | 5.4 | 4.7 |
| After 1st year of GH treatment | |||
| Height | −1.85 | −1.81 | −2.49 |
| BMI | −0.86 | −1.13 | 0.32 |
| GH dose (mg/kg/wk) | 0.32 | 0.29 | 0.28 |
| IGF‐1 SDS | 1.04 | 2.50 | −0.72 |
| IGFBP‐3 SDS | 0.20 | 4.90 | 1.18 |
| GV during the 1st year of GH treatment (cm/year) | 8.0 | 8.0 | 7.2 |
| At last visit during GH treatment | |||
| Age (years) | 16.0 | 11.8 | 13.8 |
| Height | −0.11 | −1.29 | −2.28 |
| BMI | 0.34 | −1.22 | 0.17 |
| BA‐CA (years) | 0.0 | −1.8 | 0.8 |
| GH dose (mg/kg/wk) | 0.22 | 0.32 | 0.31 |
| IGF‐1 SDS | 1.97 | 1.40 | −1.39 |
| IGFBP‐3 SDS | −1.57 | 4.62 | 0.03 |
Abbreviations: BA, bone age; BMI, body mass index; CA, chronological age; F, female; GH, growth hormone; GV, growth velocity; IGF‐1, insulin‐like growth factor‐1; IGFBP‐3, insulin‐like growth factor‐binding protein‐3; M, male; NA, not available; SDS, standard deviation score.
Corresponds to age at diagnosis of idiopathic short stature.
Figure 2Pedigrees of families with NPR2 variants and their sequencing results: (a) R921Q, (b), R495C, and (c) Y598N. Height z‐scores of each family member are described in symbols. Subjects with confirmed NPR2 variants by molecular study are indicated by solid symbols, while those unconfirmed by molecular study or that do not have normal result are indicated by open symbols. For comparisons, reference sequences of the wild type (WT) are also presented