| Literature DB >> 31960224 |
Zuzana Jaseňáková1, Vojtěch Zapletal1, Petr Padrta2, Milan Zachrdla3, Nicolas Bolik-Coulon3, Thorsten Marquardsen4, Jean-Max Tyburn5, Lukáš Žídek1, Fabien Ferrage6, Pavel Kadeřávek7.
Abstract
Improving our understanding of nanosecond motions in disordered proteins requires the enhanced sampling of the spectral density function obtained from relaxation at low magnetic fields. High-resolution relaxometry and two-field NMR measurements of relaxation have, so far, only been based on the recording of one- or two-dimensional spectra, which provide insufficient resolution for challenging disordered proteins. Here, we introduce a 3D-HNCO-based two-field NMR experiment for measurements of protein backbone [Formula: see text] amide longitudinal relaxation rates. The experiment provides accurate longitudinal relaxation rates at low field (0.33 T in our case) preserving the resolution and sensitivity typical for high-field NMR spectroscopy. Radiofrequency pulses applied on six different radiofrequency channels are used to manipulate the spin system at both fields. The experiment was demonstrated on the C-terminal domain of [Formula: see text] subunit of RNA polymerase from Bacillus subtilis, a protein with highly repetitive amino-acid sequence and very low dispersion of backbone chemical shifts.Entities:
Keywords: Dynamics; High-resolution relaxometry; Intrinsically disordered proteins; Non-uniform sampling; Nuclear magnetic resonance; Relaxation
Year: 2020 PMID: 31960224 DOI: 10.1007/s10858-019-00298-6
Source DB: PubMed Journal: J Biomol NMR ISSN: 0925-2738 Impact factor: 2.835