Literature DB >> 31946841

Stochastic point process models for multi-compartment dendritic-tree input-output transformations in spiking neurons.

D Saha, W Truccolo.   

Abstract

We extend stochastic point-process generalized linear models (PPGLMs) to the estimation of input-output transformations in dendritic trees and their contribution to the generation of soma action potentials in multi-compartmental models of single neurons. We used simulations of a model enthorinal cortex pyramidal neuron, with known dentritic tree and soma spatial organization, including active compartments defined in terms of standard cable and standard Hodgkin-Huxley equations. Each dendritic compartment (391 total) was endowed with either excitatory (E) or inhibitory (I) synaptic inputs whose strength was randomly specified. We examined the cases of both homogeneous and inhomogeneous spatial distributions for E and I synaptic inputs. The times for synaptic inputs followed a Poisson process with different mean rate regimes varying from 50 to 600 inputs/s. The soma membrane potential received also a background noise in the form of an Ornstein-Uhlenbeck process. Our main findings are: (1) Power spectra of soma membrane potentials revealed subthreshold resonances at ~40 Hz and ~80 Hz; (2) The contribution of different dendritic compartments, under the examined input ranges and spatial distributions, depended not only of the dendrite-soma path distance, but also on the number of compartments in the dendritic segment. (3) Estimated conditional intensity functions (CIFs) with PPGLMs successfully predicted spiking activity based on given E-I input times; area under ROC curves computed on test data varied from 0.8 - 0.95. (4) The CIF models identified compartments and regions receiving E-I synaptic inputs; Estimated temporal filters were consistent with dendrite-soma path distances and input weights. We expect this type of PPGLMs to contribute to data-driven identification of input-output transformations in dentritic trees based on single-neuron Ca2+ and voltage indicator imaging data.

Entities:  

Mesh:

Year:  2019        PMID: 31946841      PMCID: PMC7899528          DOI: 10.1109/EMBC.2019.8856996

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  13 in total

Review 1.  Dendritic integration of excitatory synaptic input.

Authors:  J C Magee
Journal:  Nat Rev Neurosci       Date:  2000-12       Impact factor: 34.870

Review 2.  Imaging calcium in neurons.

Authors:  Christine Grienberger; Arthur Konnerth
Journal:  Neuron       Date:  2012-03-08       Impact factor: 17.173

Review 3.  The high-conductance state of neocortical neurons in vivo.

Authors:  Alain Destexhe; Michael Rudolph; Denis Paré
Journal:  Nat Rev Neurosci       Date:  2003-09       Impact factor: 34.870

4.  A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.

Authors:  Wilson Truccolo; Uri T Eden; Matthew R Fellows; John P Donoghue; Emery N Brown
Journal:  J Neurophysiol       Date:  2004-09-08       Impact factor: 2.714

5.  Single-neuron dynamics in human focal epilepsy.

Authors:  Wilson Truccolo; Jacob A Donoghue; Leigh R Hochberg; Emad N Eskandar; Joseph R Madsen; William S Anderson; Emery N Brown; Eric Halgren; Sydney S Cash
Journal:  Nat Neurosci       Date:  2011-03-27       Impact factor: 24.884

6.  Capturing the Dynamical Repertoire of Single Neurons with Generalized Linear Models.

Authors:  Alison I Weber; Jonathan W Pillow
Journal:  Neural Comput       Date:  2017-09-28       Impact factor: 2.026

7.  Dendritic spikes enhance stimulus selectivity in cortical neurons in vivo.

Authors:  Spencer L Smith; Ikuko T Smith; Tiago Branco; Michael Häusser
Journal:  Nature       Date:  2013-10-27       Impact factor: 49.962

8.  Global and Multiplexed Dendritic Computations under In Vivo-like Conditions.

Authors:  Balázs B Ujfalussy; Judit K Makara; Máté Lengyel; Tiago Branco
Journal:  Neuron       Date:  2018-11-07       Impact factor: 17.173

9.  Collective dynamics in human and monkey sensorimotor cortex: predicting single neuron spikes.

Authors:  Wilson Truccolo; Leigh R Hochberg; John P Donoghue
Journal:  Nat Neurosci       Date:  2009-12-06       Impact factor: 24.884

10.  Spike-timing prediction in cortical neurons with active dendrites.

Authors:  Richard Naud; Brice Bathellier; Wulfram Gerstner
Journal:  Front Comput Neurosci       Date:  2014-08-13       Impact factor: 2.380

View more
  1 in total

1.  Anatomy and activity patterns in a multifunctional motor neuron and its surrounding circuits.

Authors:  Mária Ashaber; Yusuke Tomina; Pegah Kassraian; Eric A Bushong; William B Kristan; Mark H Ellisman; Daniel A Wagenaar
Journal:  Elife       Date:  2021-02-15       Impact factor: 8.140

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.