Literature DB >> 31938466

LogD Contributions of Substituents Commonly Used in Medicinal Chemistry.

Matthew L Landry1, James J Crawford1.   

Abstract

The importance of physicochemical property calculation and measurement is well-established in drug discovery. In particular, lipophilicity predictions play a central role in target design and prioritization. While significant progress has been made in our ability to calculate both logP and logD, the quality of these predictions is limited by the size and diversity of the underlying data set. Access to diverse data sets and advanced models is often limited to large organizations or consortia, and they are not available to many students and practitioners of medicinal chemistry. A molecular matched pair analysis of median ΔlogD 7.4 contributions for substituents commonly used in drug discovery programs at Genentech is reported. The results of this ΔlogD analysis are compiled into a single table, which we anticipate will be of use to practicing medicinal chemists.
Copyright © 2019 American Chemical Society.

Year:  2019        PMID: 31938466      PMCID: PMC6956358          DOI: 10.1021/acsmedchemlett.9b00489

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  20 in total

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Journal:  Adv Drug Deliv Rev       Date:  2001-03-01       Impact factor: 15.470

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4.  Lead optimization using matched molecular pairs: inclusion of contextual information for enhanced prediction of HERG inhibition, solubility, and lipophilicity.

Authors:  George Papadatos; Muhammad Alkarouri; Valerie J Gillet; Peter Willett; Visakan Kadirkamanathan; Christopher N Luscombe; Gianpaolo Bravi; Nicola J Richmond; Stephen D Pickett; Jameed Hussain; John M Pritchard; Anthony W J Cooper; Simon J F Macdonald
Journal:  J Chem Inf Model       Date:  2010-10-25       Impact factor: 4.956

Review 5.  Calculation of molecular lipophilicity: State-of-the-art and comparison of log P methods on more than 96,000 compounds.

Authors:  Raimund Mannhold; Gennadiy I Poda; Claude Ostermann; Igor V Tetko
Journal:  J Pharm Sci       Date:  2009-03       Impact factor: 3.534

6.  A novel method for high throughput lipophilicity determination by microscale shake flask and liquid chromatography tandem mass spectrometry.

Authors:  Baiwei Lin; Joseph H Pease
Journal:  Comb Chem High Throughput Screen       Date:  2013-12       Impact factor: 1.339

7.  Extraction of tacit knowledge from large ADME data sets via pairwise analysis.

Authors:  Christopher E Keefer; George Chang; Gregory W Kauffman
Journal:  Bioorg Med Chem       Date:  2011-05-06       Impact factor: 3.641

8.  Learning Medicinal Chemistry Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) Rules from Cross-Company Matched Molecular Pairs Analysis (MMPA).

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Journal:  J Med Chem       Date:  2017-09-28       Impact factor: 7.446

Review 9.  An analysis of the attrition of drug candidates from four major pharmaceutical companies.

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Authors:  Alexander G Dossetter; Edward J Griffen; Andrew G Leach
Journal:  Drug Discov Today       Date:  2013-04-02       Impact factor: 7.851

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Authors:  Jarrod W Johnson; Michael J Ellis; Zoë A Piquette; Craig MacNair; Lindsey Carfrae; Timsy Bhando; Nikki E Ritchie; Paul Saliba; Eric D Brown; Jakob Magolan
Journal:  ACS Med Chem Lett       Date:  2022-01-21       Impact factor: 4.345

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Authors:  Andrew K Ecker; Dorothy A Levorse; Daniel A Victor; Matthew J Mitcheltree
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Review 4.  Put a ring on it: application of small aliphatic rings in medicinal chemistry.

Authors:  Matthias R Bauer; Paolo Di Fruscia; Simon C C Lucas; Iacovos N Michaelides; Jennifer E Nelson; R Ian Storer; Benjamin C Whitehurst
Journal:  RSC Med Chem       Date:  2021-01-07

5.  Photocatalytic trifluoromethoxylation of arenes and heteroarenes in continuous-flow.

Authors:  Alexander V Nyuchev; Ting Wan; Borja Cendón; Carlo Sambiagio; Job J C Struijs; Michelle Ho; Moisés Gulías; Ying Wang; Timothy Noël
Journal:  Beilstein J Org Chem       Date:  2020-06-15       Impact factor: 2.883

6.  Turning the Other Cheek: Influence of the cis-Tetrafluorocyclohexyl Motif on Physicochemical and Metabolic Properties.

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