| Literature DB >> 31936505 |
Alexandra T Bordei Telehoiu1, Diana C Nuță1, Miron T Căproiu2, Florea Dumitrascu2, Irina Zarafu3, Petre Ioniță3, Carmellina D Bădiceanu1, Speranța Avram4, Mariana C Chifiriuc5, Coralia Bleotu6, Carmen Limban1.
Abstract
In this paper, we aimed to exploit and combine in the same molecule the carbazole and the 1,3,4-oxadiazole pharmacophores, to obtain novel carprofen derivatives, by using two synthesis pathways. For the first route, the following steps have been followed: (i) (RS)-2-(6-chloro-9H-carbazol-2-yl)propanonic acid (carprofen) treatment with methanol, yielding methyl (RS)-2-(6-chloro-9H-carbazol-2-yl)propanoate; (ii) the resulted methylic ester was converted to (RS)-2-(6-chloro-9H-carbazol-2-yl)propane hydrazide (carprofen hydrazide) by treatment with hydrazine hydrate; (iii) reaction of the hydrazide derivative with acyl chlorides led to N-[(2RS)-2-(6-chloro-9H-carbazol-2-yl)propanoil]-N'-R-substituted-benzoylhydrazine formation, which; (iv) in reaction with phosphorus oxychloride gave the (RS)-1-(6-chloro-9H-carbazol-2-yl)-1-(1,3,4-oxadiazol-2-yl)ethane derivatives. In the second synthesis pathway, new 1,3,4-oxadiazole ring compounds were obtained starting from carprofen which was reacted with isoniazid, in the presence of phosphorus oxychloride to form (RS)-1-(6-chloro-9H-carbazol-2-yl)-1-[5-(4-pyridyl)-1,3,4-oxadiazol-2-yl]ethane. The synthesized compounds were characterized by IR, 1H-NMR and 13C-NMR, screened for their drug-like properties and evaluated for in vitro cytotoxicity and antimicrobial activity. The obtained compounds exhibited a good antimicrobial activity, some of the compounds being particularly active on E. coli, while others on C. albicans. The most significant result is represented by their exceptional anti-biofilm activity, particularly against the P. aeruginosa biofilm. The cytotoxicity assay revealed that at concentrations lower than 100 μg/mL, the tested compounds do not induce cytotoxicity and do not alter the mammalian cell cycle. The new synthesized compounds show good drug-like properties. The ADME-Tox profiles indicate a good oral absorption and average permeability through the blood brain barrier. However, further research is needed to reduce the predicted mutagenic potential and the hepatotoxicity.Entities:
Keywords: antimicrobial; carbazole; carprofen; cytotoxicity; in silico; oxadiazole
Year: 2020 PMID: 31936505 PMCID: PMC7024163 DOI: 10.3390/molecules25020266
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Carbazole derivatives with pharmacological properties.
Figure 21,3,4-Oxadiazole derivatives used as drugs.
Scheme 1Synthesis pathways for the novel 2,5-disubstituted 1,3,4-oxadiazole 5a–d.
MIC (mg/mL) values for the compounds 4a–c, 5a–d.
| Compound | 4a | 4b | 4c | 5a | 5b | 5c | 5d | |
|---|---|---|---|---|---|---|---|---|
| Microorganism | ||||||||
| 10 | 5 | 10 | 5 | 5 | 2.5 | 5 | ||
| 5 | 5 | 2.5 | 2.5 | 5 | 5 | 5 | ||
| 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | ||
| 1.25 | 2.5 | 2.5 | 2.5 | 2.5 | 5 | 2.5 | ||
| 5 | 2.5 | 5 | 2.5 | 2.5 | 0.625 | 5 | ||
Minimal bactericidal concentration (MBC) (mg/mL) values for the compounds 4a–c, 5a–d.
| Compound | 4a | 4b | 4c | 5a | 5b | 5c | 5d | |
|---|---|---|---|---|---|---|---|---|
| Microorganism | ||||||||
| 10 | 10 | 10 | 10 | 10 | 5 | 5 | ||
| 5 | 5 | 5 | 5 | 5 | 5 | 5 | ||
| 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | 2.5 | ||
| 1.25 | 5 | 5 | 5 | 5 | 5 | 5 | ||
| 10 | 5 | 10 | 5 | 5 | 0.625 | 10 | ||
MBEC (mg/mL) values for the compounds 4a–c, 5a–d.
| Compound | 4a | 4b | 4c | 5a | 5b | 5c | 5d | |
|---|---|---|---|---|---|---|---|---|
| Microorganism | ||||||||
| 2.5 | 0.009 | 2.5 | 1.25 | 0.078 | 10 | 0.625 | ||
| 1.25 | 0.625 | 1.25 | 0.312 | 0.039 | 1.25 | 0.312 | ||
| 0.009 | 0.009 | 0.009 | 0.009 | 0.009 | 0.009 | 0.625 | ||
| 1.25 | 1.25 | 1.25 | 10 | 1.25 | 2.5 | 1.25 | ||
| 0.312 | 0.039 | 0.625 | 0.078 | 1.25 | 0.312 | 0.156 | ||
Figure 3The cytotoxicity of compounds 4a–c, 5a–d on HeLa and HaCaT cells (evaluation at 48 h, using CellTiter 96® AQueous One Solution Cell Proliferation).
Figure 4Viability of HeLa cells treated with 1mg/mL of 4a–c, 5a–d for 24 h. FDA/PI staining, 200×.
Figure 5Flow cytometry histograms showing the influence of compounds 4a–c, 5a–d on the cellular cycle of HeLa and HaCaT cells. Y axis—intensity of fluorescence; X axis—the relative number of cells (15,000 events were investigated).
Lipinski and Veber rules validation, bioavailability score and predicted molecular weight (MW).
| Compound | Lipinski Rule | Veber Rule | Bioavailability Score | MW (g/mol) |
|---|---|---|---|---|
|
| YES | YES | 0.55 | 391.85 |
|
| YES * | YES | 0.55 | 459.85 |
|
| YES * | YES | 0.55 | 426.30 |
|
| YES | YES | 0.55 | 373.83 |
|
| YES * | YES | 0.55 | 408.28 |
|
| YES | YES | 0.55 | 441.83 |
|
| YES | YES | 0.55 | 450.92 |
|
| YES | YES | 0.56 | 273.71 |
* 4b, 4c, 5b, and 5d don’t respect the LogP rule, being higher than 5, but they respect the other criteria of the Lipinski rule.
Structural similarities.
| Compound | Similar Compound | Percent | Chemical Structure | Target Structure of Similar Compound |
|---|---|---|---|---|
|
| CHEMBL2171276 * | 0.602 | 2-(6-chloro-9 | Faah inhibition-fatty acid amide hydrolase (Norway rat) |
| CHEMBL2171249 | 0.585 | |||
| CHEMBL1316 | 0.585 | |||
|
| CHEMBL2171276 | 0.557 | 2-(6-chloro-9 | Faah inhibition-fatty acid amide hydrolase (Norway rat) |
|
| CHEMBL2171276 * | 0.590 | 2-(6-chloro-9 | Faah inhibition-fatty acid amide hydrolase (Norway rat) |
| CHEMBL2171249 | 0.573 | |||
| CHEMBL1316 | 0.573 | |||
|
| CHEMBL380021 * | 0.595 | 2-[2-[5-[2-(4-chlorophenyl)ethyl]-1,3,4-oxadiazol-2-yl]-1~{ | nociceptive receptor ligand |
| CHEMBL2418797 | 0.588 | |||
| CHEMBL197502 | 0.557 | |||
|
| CHEMBL380021 * | 0.594 | 2-[2-[5-[2-(4-clorofenil)etil]-1,3,4-oxadiazol-2-il]-1~{ | nociceptive receptor ligand |
| CHEMBL2418797 | 0.576 | |||
|
| CHEMBL2418770 * | 0.587 | 2-(3~{ | QPCT—glutaminyl-peptide cyclotransferase inhibition (human) |
| CHEMBL380021 | 0.565 | |||
|
| CHEMBL1611023 | 0.430 | (4-[5-(4-Chlorobenzoyl)-1,3,4-oxadiazol-2-yl]pyridine) | inactive |
* Ligand with higher percent of similarity with analyzed compound.
Prediction of intestinal absorption, permeability of Caco2, blood–brain barrier (BBB) permeability, Renal OCT2.
| Compound | 4a | 4b | 4c | 5a | 5b | 5c | 5d | Carprofen | Unit |
|---|---|---|---|---|---|---|---|---|---|
| Intestinal absorption | 91 | 89 | 90 | 94 | 92 | 91 | 96 | 94 | % Absorption |
| Caco-2 pkCSM permeability | 0.919 | 0.944 | 0.934 | 1.021 | 1.01 | 1.016 | 0.934 | 1.301 | log Papp in 10−6 cm/s |
| BBB permeability | −0.635 | −0.942 | −0.816 | 0.428 | 0.383 | 0.342 | −0.371 | 0.191 | log BB |
| Renal Substrate OCT2 | NO | NO | NO | NO | NO | NO | NO | NO |
Toxicity descriptors.
| Compound | 4a | 4b | 4c | 5a | 5b | 5c | 5d | Unit |
|---|---|---|---|---|---|---|---|---|
| AMES toxicity | yes | yes | yes | yes | yes | yes | yes | Yes/No |
| DMT(human) | 0.19 | 0.13 | 0.16 | 0.41 | 0.36 | 0.33 | 0.503 | log mg/kg/day |
| I. hERGI | no | no | no | no | no | no | no | Yes/No |
| I. hERGII | yes | yes | yes | yes | yes | yes | yes | Yes/No |
| LD 50 | 2.46 | 2.46 | 2.50 | 2.30 | 2.33 | 2.34 | 2.60 | mol/kg |
| Hepatotoxicity | yes | yes | yes | yes | yes | yes | yes | Yes/No |
DMT—maximum tolerated human dose, I—inhibitor, LD—lethal dose.