Literature DB >> 31928192

The relationship between genome size and metabolic rate in extant vertebrates.

Jacob D Gardner1, Michel Laurin2, Chris L Organ1.   

Abstract

Genome size has long been hypothesized to affect the metabolic rate in various groups of animals. The mechanism behind this proposed association is the nucleotypic effect, in which large nucleus and cell sizes influence cellular metabolism through surface area-to-volume ratios. Here, we provide a review of the recent literature on the relationship between genome size and metabolic rate. We also conduct an analysis using phylogenetic comparative methods and a large sample of extant vertebrates. We find no evidence that the effect of genome size improves upon models in explaining metabolic rate variation. Not surprisingly, our results show a strong positive relationship between metabolic rate and body mass, as well as a substantial difference in metabolic rate between endothermic and ectothermic vertebrates, controlling for body mass. The presence of endothermy can also explain elevated rate shifts in metabolic rate whereas genome size cannot. We further find no evidence for a punctuated model of evolution for metabolic rate. Our results do not rule out the possibility that genome size affects cellular physiology in some tissues, but they are consistent with previous research suggesting little support for a direct functional connection between genome size and basal metabolic rate in extant vertebrates. This article is part of the theme issue 'Vertebrate palaeophysiology'.

Keywords:  genome; macroevolution; metabolism; physiology; vertebrates

Mesh:

Year:  2020        PMID: 31928192      PMCID: PMC7017434          DOI: 10.1098/rstb.2019.0146

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  36 in total

1.  Genome size and developmental parameters in the homeothermic vertebrates.

Authors:  T Ryan Gregory
Journal:  Genome       Date:  2002-10       Impact factor: 2.166

2.  Improving marginal likelihood estimation for Bayesian phylogenetic model selection.

Authors:  Wangang Xie; Paul O Lewis; Yu Fan; Lynn Kuo; Ming-Hui Chen
Journal:  Syst Biol       Date:  2010-12-27       Impact factor: 15.683

3.  The genome sizes of megabats (Chiroptera: Pteropodidae) are remarkably constrained.

Authors:  Jillian D L Smith; T Ryan Gregory
Journal:  Biol Lett       Date:  2009-03-04       Impact factor: 3.703

4.  Patterns of genome size diversity in bats (order Chiroptera).

Authors:  Jillian D L Smith; John W Bickham; T Ryan Gregory
Journal:  Genome       Date:  2013-09-23       Impact factor: 2.166

5.  Sauropod dinosaurs evolved moderately sized genomes unrelated to body size.

Authors:  Chris L Organ; Stephen L Brusatte; Koen Stein
Journal:  Proc Biol Sci       Date:  2009-09-30       Impact factor: 5.349

Review 6.  Inferring the physiological regimes of extinct vertebrates: methods, limits and framework.

Authors:  Kevin Padian; Armand de Ricqlès
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-01-13       Impact factor: 6.237

7.  Small genomes for better flyers.

Authors:  A L Hughes; M K Hughes
Journal:  Nature       Date:  1995-10-05       Impact factor: 49.962

8.  NUCLEOTYPIC EFFECT IN HOMEOTHERMS: BODY-MASS-CORRECTED BASAL METABOLIC RATE OF MAMMALS IS RELATED TO GENOME SIZE.

Authors:  Alexander E Vinogradov
Journal:  Evolution       Date:  1995-12       Impact factor: 3.694

9.  Evolutionary dynamics of intron size, genome size, and physiological correlates in archosaurs.

Authors:  Eric Waltari; Scott V Edwards
Journal:  Am Nat       Date:  2002-11       Impact factor: 3.926

10.  The evolution of intron size in amniotes: a role for powered flight?

Authors:  Qu Zhang; Scott V Edwards
Journal:  Genome Biol Evol       Date:  2012       Impact factor: 3.416

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  10 in total

1.  Vertebrate palaeophysiology.

Authors:  Jorge Cubo; Adam K Huttenlocker
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-01-13       Impact factor: 6.237

Review 2.  The evolution of mechanisms involved in vertebrate endothermy.

Authors:  Lucas J Legendre; Donald Davesne
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-01-13       Impact factor: 6.237

3.  Genes underlying the evolution of tetrapod testes size.

Authors:  Joanna Baker; Andrew Meade; Chris Venditti
Journal:  BMC Biol       Date:  2021-08-18       Impact factor: 7.431

4.  Measuring metabolic rate in single flies during sleep and waking states via indirect calorimetry.

Authors:  Elizabeth B Brown; Jaco Klok; Alex C Keene
Journal:  J Neurosci Methods       Date:  2022-04-26       Impact factor: 2.987

5.  Genome Size Covaries More Positively with Propagule Size than Adult Size: New Insights into an Old Problem.

Authors:  Douglas S Glazier
Journal:  Biology (Basel)       Date:  2021-03-26

6.  Energetic Lifestyle Drives Size and Shape of Avian Erythrocytes.

Authors:  Carl D Soulsbury; Jessica Dobson; D Charles Deeming; Piotr Minias
Journal:  Integr Comp Biol       Date:  2022-08-13       Impact factor: 3.392

7.  Transposons and non-coding regions drive the intrafamily differences of genome size in insects.

Authors:  Yuyang Cong; Xinhai Ye; Yang Mei; Kang He; Fei Li
Journal:  iScience       Date:  2022-08-04

Review 8.  How Metabolic Rate Relates to Cell Size.

Authors:  Douglas S Glazier
Journal:  Biology (Basel)       Date:  2022-07-25

9.  Genome size drives morphological evolution in organ-specific ways.

Authors:  Michael W Itgen; Giovanna R Natalie; Dustin S Siegel; Stanley K Sessions; Rachel Lockridge Mueller
Journal:  Evolution       Date:  2022-06-15       Impact factor: 4.171

10.  The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera).

Authors:  Hao Yuan; Yuan Huang; Ying Mao; Nan Zhang; Yimeng Nie; Xue Zhang; Yafu Zhou; Shaoli Mao
Journal:  Front Genet       Date:  2021-06-23       Impact factor: 4.599

  10 in total

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