| Literature DB >> 31889911 |
Elham Shahriyari1,2, Leila Vahedi2, Nasrin Roshanipour3, Mohammad Asghari Jafarabadi4, Amin Khamaneh5, Maryam Ghaffari Laleh1,4.
Abstract
BACKGROUND: Polymorphisms in the interleukin-10 (IL-10) gene have been studied in various ethnic groups for possible association with Behçet's disease (BD). This study aimed to perform a meta-analysis of eligible studies to calculate the association of IL-10 polymorphisms with BD.A systematic literature search was carried out in PubMed, Embase, Web of Science, and Scopus databases to identify relevant publications, and extracted the respective results. Pooled odds ratio (OR) with 95% confidence interval (CI) was used to evaluate the power of association with a random-effects model.Entities:
Keywords: Behçet’s disease; Interleukin-10; Meta-analysis; Polymorphism
Year: 2019 PMID: 31889911 PMCID: PMC6929502 DOI: 10.1186/s12950-019-0230-2
Source DB: PubMed Journal: J Inflamm (Lond) ISSN: 1476-9255 Impact factor: 4.981
Fig. 1Flow diagram of studies for inclusion in the systematic review and meta-analysis
Characteristics of studies included in the meta-analysis
| Author(year) | Ethnicity | Sample size case/control | Mean-age | Genotyping methods | Studied polymorphism | HWE Pvalue | ref | |
|---|---|---|---|---|---|---|---|---|
| Case | Control | |||||||
| Baris S(2016) | Turkish | 71/70 | 37.8 ± 1.0 | – | PCR-RFLP | rs1800896 | – | 27 |
| Hu J. stage I(2015) | Chinese Han | 300/350 | 33.60 ± 8.78 | 39.66 ± 11.19 | PCR-RFLP | rs1800896, rs1800872, rs1554286 | 28 | |
| Hu J. stage II(2015) | Chinese Han | 418/1403 | 33.60 ± 8.78 | 39.66 ± 11.19 | PCR-RFLP | rs1800871 | p > 0.05 | 28 |
| Al-Okaily F(2015) | Saudi | 61/211 | 37.87 ± 12.5 | 36 ± 10 | PCR-ARMS | rs1800896, rs1800871, rs1800872 | – | 29 |
| Talaat R. M(2014) | Egyptian | 87/97 | 34.37 ± 10.36 | – | PCR-SSP | rs1800896, rs1800871 | p > 0.05 | 30 |
| Xavier J. M(2012) | Iranian | 973/637 | 39.1 ± 11.0 | 42.0 ± 11.6 | Sequenom iPlex assay | rs1800896, rs1518111, rs1554286 | 26 | |
| Shahram F(2011) | Iranian | 150/140 | – | – | PCR-SSP | rs1800896, rs1800871, rs1800872 | p > 0.05 | 31 |
| Ates O(2010) | Turkish | 102/102 | 37.2 ± 8.4 | 52 ± 7 | PCR-ARMS | rs1800896, rs1800871, rs1800872 | – | 32 |
| Dilek K(2009) | Turkish | 97/127 | – | – | PCR-SSP | rs1800896, rs1800871, rs1800872 | p > 0.05 | 33 |
| Wallace GR(2007) | UK | 63/182 | – | – | PCR-SSP | rs1800896, rs1800871 | p > 0.05 | 34 |
| Wallace GR(2007) | ME | 115/113 | – | – | PCR-SSP | rs1800896, rs1800871 | p > 0.05 | 34 |
| Kramer M(2018) | Turkish | 64/68 | – | – | Sanger technique | rs1800871, rs1800872, rs1518111 | – | 35 |
| Kramer M(2018) | Israeli | 25/20 | – | – | Sanger technique | rs1800871, rs1800872, rs1518111 | – | 35 |
| Yu H(2017) | Chinese Han | 1206/2475 | 34.86 ± 9.9 | 35.46 ± 10.3 | Sequenom Mass Array | rs1800871, rs1554286 | – | 36 |
| Carapito R(2015) | Iranian | 552/417 | – | – | Taqman | rs1800871, rs1518111 | – | 37 |
| Wu Z(2014) | Chinese | 407/679 | 38.02 ± 12.44 | 38.81 ± 10.45 | Sequenom Mass Array | rs1800871, rs1518111 | p > 0.05 | 38 |
| Khaib Dit Naib O(2013) | Western Algeria | 51/96 | 26 ± 11 | – | Direct sequencing | rs1800871, rs1800872 | – | 39 |
| Kirino Y(2013) | Turkish | 1209/1278 | – | – | GWAS | rs1800871, rs1518111 | 40 | |
| Mizuki N(2010) | Japanese | 611/737 | – | – | GWAS | rs1800871, rs1800872 | P < 0.001 | 7 |
| Mizuki N(2010) | Korean | 124/140 | – | – | GWAS | rs1800871, rs1800872 | P < 0.001 | 7 |
| Mizuki N(2010) | Turkish | 1215/1279 | – | – | GWAS | rs1800871, rs1800872 | P < 0.001 | 7 |
| Afkari B(2018) | Iranian | 47/58 | 38.02 ± 10.25 | 37.4 ± 8.5 | PCR-RFLP | rs1800872 | p > 0.05 | 41 |
| Montes-Cano MA(2013) | Spanish | 304/313 | 38.7 ± 13.8 | – | Taqman | rs1800872 | p > 0.05 | 42 |
| Remmers EF(2010) | Discovery-Turkish | 1161/1221 | – | – | GWAS | rs1518111 | 8 | |
| Remmers EF(2010) | Rplication-Turkish | 110/224 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
| Remmers EF(2010) | Replication-Middle Eastern Arab | 188/163 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
| Remmers EF(2010) | Replication-Greek | 107/84 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
| Remmers EF(2010) | Replication-UK Caucasian | 120/119 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
| Remmers EF(2010) | Replication-Korean | 77/52 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
| Remmers EF(2010) | Replication-Japanese | 611/737 | – | – | GWAS | rs1518111 | p > 0.00001 | 8 |
Meta-analysis of the association between IL-10 polymorphisms and BD risk
| polymorphism | No. of studies | Comparison | Test of association | Test of heterogeneity | Egger’s test (P) | Metareg’s test (P) | |||
|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | P-value | P- value | I2 (%) | Q test | |||||
| rs1800896 A/G | 10 | GG vs. AA | 0.925 (0.684–1.251) | 0.613 | 0.266 | 19.9 | 9.98 | 0.746 | 0.689 |
| GG + GA vs. AA | 0.936 (0.733–1.195) | 0.596 | 0.020 | 56/0 | 18.20 | 0.836 | 0.866 | ||
| GG vs. GA + AA | 0.975 (0.660–1.441) | 0.900 | 0.025 | 54.4 | 17.55 | 0.619 | 0.640 | ||
| AG vs. AA | 0.945 (0.717–1.245) | 0.687 | 0.007 | 62.2 | 21.17 | 0.822 | 0.870 | ||
| G vs. A | 0.965 (0.831–1.120) | 0.640 | 0.084 | 41.0 | 15.25 | 0.816 | 0.807 | ||
| rs1800871 T/C | 19 | CC vs. TT | 0.466 (0.368–0.589) | 0.000 | 0.003 | 57.4 | 32.88 | 0.081 | 0.347 |
| CC + CT vs. TT | 0.692 (0.584–0.820) | 0.000 | 0.000 | 66.1 | 41.33 | 0.842 | 0.674 | ||
| CC vs. CT + TT | 0.557 (0.405–0.767) | 0.000 | 0.000 | 86.6 | 119.02 | 0.032 | 0.123 | ||
| CT vs. TT | 0.842 (0.572–1.240) | 0.384 | 0.000 | 93.7 | 220.52 | 0.542 | 0.883 | ||
| C vs. T | 0.691 (0.626–0.762) | 0.000 | 0.000 | 67.8 | 49.73 | 0.363 | 0.493 | ||
| rs1800872 A/C | 13 | CC vs. AA | 0.723 (0.440–1.186) | 0.199 | 0.000 | 72.4 | 32.63 | 0.161 | 0.360 |
| CC + CA vs. AA | 0.713 (0.535–0.951) | 0.021 | 0.004 | 62.4 | 23.94 | 0.116 | 0.276 | ||
| CC vs. CA + AA | 0.776 (0.583–1.032) | 0.082 | 0.004 | 60.3 | 27.71 | 0.210 | 0.367 | ||
| CA vs. AA | 0.716 (0.546–0.940) | 0.016 | 0.024 | 53.0 | 19.13 | 0.101 | 0.313 | ||
| C vs. A | 0.779 (0.662–0.915) | 0.002 | 0.000 | 70.2 | 33.59 | 0.194 | 0.423 | ||
| rs1518111 A/G | 13 | GG vs. AA | 0.570 (0.471–0.690) | 0.000 | 0.459 | 0.0 | 1.56 | 0.622 | 0.741 |
| GG + GA vs. AA | 0.697)0.596–0.814) | 0.000 | 0.393 | 0.0 | 1.87 | 0.684 | 0.533 | ||
| GG vs. GA + AA | 0.701 (0.623–0.790) | 0.000 | 0.505 | 0.0 | 3.32 | 0.558 | 0.967 | ||
| AG vs. AA | 0.786 (0.667–0.927) | 0.004 | 0.723 | 0.0 | 0.65 | 0.604 | 0.645 | ||
| G vs. A | 0.738 (0.681–0.800) | 0.000 | 0.106 | 36.7 | 15.79 | 0.500 | 0.352 | ||
| rs1554286 T/C | 3 | CC vs. TT | 0.508 (0.372–0.694) | 0.000 | 0.198 | 38.2 | 3.23 | 0.795 | 0.868 |
| CC + CT vs. TT | 0.605)0.467–0.785( | 0.000 | 0.087 | 59.1 | 4.89 | 0.626 | 0.466 | ||
| CC vs. CT + TT | 0.665)0.484–0.916( | 0.012 | 0.041 | 68.7 | 6.40 | 0.487 | 0.893 | ||
| CT vs. TT | 0.646 (0.502–0.832) | 0.001 | 0.115 | 53.8 | 4.33 | 0.656 | 0.506 | ||
| C vs. T | 0.582 (0.440–0.770) | 0.000 | 0.000 | 87.7 | 16.23 | 0.384 | 0.265 | ||
Fig. 2Forest plot of the association of IL-10 polymorphisms with BD. A random-effects model for the OR with 95% CI was used to detect an association between IL-10 polymorphisms with BD. (a) rs1800896 (b) rs1800871 (c) rs1800872 (d) rs1518111 (e) rs1554286
Fig. 3Begg’s funnel plot for publication bias analysis of the IL-10 polymorphisms with BD. Symmetry in Begg’s funnel plots demonstrate the absence of publication bias in the studies investigating the association of (a) rs1800896 (b) rs1800871 (c) rs1800872 (d) rs1518111