| Literature DB >> 31888287 |
Yuchen Kong1,2, Shenghui Fang1,2, Xianting Wu2,3, Yan Gong1,2, Renshan Zhu2,3, Jian Liu1,2, Yi Peng1,2.
Abstract
The dimensions of phenotyping parameters such as the thickness of rice play an important role in rice quality assessment and phenotyping research. The objective of this study was to propose an automatic method for extracting rice thickness. This method was based on the principle of binocular stereovision but avoiding the problem that it was difficult to directly match the corresponding points for 3D reconstruction due to the lack of texture of rice. Firstly, the shape features of edge, instead of texture, was used to match the corresponding points of the rice edge. Secondly, the height of the rice edge was obtained by way of space intersection. Finally, the thickness of rice was extracted based on the assumption that the average height of the edges of multiple rice is half of the thickness of rice. According to the results of the experiments on six kinds of rice or grain, errors of thickness extraction were no more than the upper limit of 0.1 mm specified in the national industry standard. The results proved that edge features could be used to extract rice thickness and validated the effectiveness of the thickness extraction algorithm we proposed, which provided technical support for the extraction of phenotyping parameters for crop researchers.Entities:
Keywords: crop phenotyping; digital image processing; photogrammetry; rice grain; thickness
Year: 2019 PMID: 31888287 PMCID: PMC6960983 DOI: 10.3390/s19245561
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Introduction of experimental samples.
| No. | Name (Abbr.) | Category | Source | Appearance Characteristics |
|---|---|---|---|---|
| 1 | Thai rice (tg) | Indica rice | market | slender rice shape; high transparency |
| 2 | Shengke rice (sk) | Indica rice | Hainanexperiment field | long shape |
| 3 | Xianning rice (xn) | Japonica rice | Xianning experiment field | medium rice shape |
| 4 | Zaomi rice (zm) | Japonica rice | Xianning experiment field | short and full |
| 5 | Glutinous rice (nm) | Sticky rice | market | medium rice shape; low transparency |
| 6 | Luoyou9348 (gz) | Indica rice grain | Ezhou experiment field | slender grain shape with two pointed ends |
Figure 1Experiment equipment.
Figure 2Experimental equipment: (a) left image of the stereo pairs; (b) right image of the stereo pairs.
Figure 3Top view of rice.
Figure 4Side view of rice.
Figure 5Schematic diagram of collinear equation.
Figure 6One of the images of rice.
Figure 7Flow chart for obtaining thickness.
Figure 8Process of matching the corresponding rice.
Figure 9n distances from the centroid to edge points.
Figure 10Resampling the distances.
Figure 11Steps of rice extraction from images: (a) original image; (b) image after graying; (c)image after filtering and denoising; (d) image after binarization; (e) removing broken rice; (f)removing clumped rice.
Figure 12Matching of the corresponding points.
Errors between calculated values and measured values.
| Rice/Grain | No. | Rice Thickness | Time Consuming (s) | Time Consumed by Each Sample (s) | ||
|---|---|---|---|---|---|---|
| Calculated Value/mm | Measured Value/mm | Error/mm | ||||
| tg | 1 | 1.73 | 1.63 | 0.10 | 20.96 | 1.05 |
| 2 | 1.65 | 0.02 | 20.77 | 1.04 | ||
| 3 | 1.65 | 0.02 | 21.19 | 1.06 | ||
| sk | 1 | 1.76 | 1.83 | −0.07 | 21.07 | 1.05 |
| 2 | 1.86 | 0.03 | 21.01 | 1.05 | ||
| 3 | 1.93 | 0.10 | 21.29 | 1.06 | ||
| xn | 1 | 1.85 | 1.77 | 0.08 | 20.86 | 1.04 |
| 2 | 1.81 | 0.04 | 20.91 | 1.05 | ||
| 3 | 1.86 | 0.09 | 20.90 | 1.05 | ||
| zm | 1 | 1.91 | 1.86 | 0.05 | 21.21 | 1.06 |
| 2 | 1.85 | −0.01 | 21.41 | 1.07 | ||
| 3 | 1.87 | 0.01 | 20.96 | 1.05 | ||
| nm | 1 | 1.87 | 1.82 | 0.05 | 20.86 | 1.04 |
| 2 | 1.78 | −0.04 | 21.01 | 1.05 | ||
| 3 | 1.88 | 0.06 | 20.89 | 1.04 | ||
| gz | 1 | 2.23 | 2.15 | 0.08 | 21.20 | 1.06 |
| 2 | 2.23 | 2.15 | 0.08 | 20.95 | 1.05 | |
| 3 | 2.13 | 2.09 | 0.04 | 20.91 | 1.05 | |
Figure 13Result of rice extraction: (a) original rice image; (b) the extracted part (rice) was filled with black, but still a small part of white remained.
Figure 14The approximation degree between the true value and the calculated value extracted from different amounts of samples.
Figure 15Effect of the base-height ratio on thickness accuracy.