Literature DB >> 31883794

A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity.

Fadi Jacob1, Ryan D Salinas2, Daniel Y Zhang3, Phuong T T Nguyen4, Jordan G Schnoll5, Samuel Zheng Hao Wong6, Radhika Thokala2, Saad Sheikh7, Deeksha Saxena7, Stefan Prokop8, Di-Ao Liu9, Xuyu Qian10, Dmitriy Petrov2, Timothy Lucas2, H Isaac Chen11, Jay F Dorsey12, Kimberly M Christian5, Zev A Binder13, MacLean Nasrallah12, Steven Brem13, Donald M O'Rourke14, Guo-Li Ming15, Hongjun Song16.   

Abstract

Glioblastomas exhibit vast inter- and intra-tumoral heterogeneity, complicating the development of effective therapeutic strategies. Current in vitro models are limited in preserving the cellular and mutational diversity of parental tumors and require a prolonged generation time. Here, we report methods for generating and biobanking patient-derived glioblastoma organoids (GBOs) that recapitulate the histological features, cellular diversity, gene expression, and mutational profiles of their corresponding parental tumors. GBOs can be generated quickly with high reliability and exhibit rapid, aggressive infiltration when transplanted into adult rodent brains. We further demonstrate the utility of GBOs to test personalized therapies by correlating GBO mutational profiles with responses to specific drugs and by modeling chimeric antigen receptor T cell immunotherapy. Our studies show that GBOs maintain many key features of glioblastomas and can be rapidly deployed to investigate patient-specific treatment strategies. Additionally, our live biobank establishes a rich resource for basic and translational glioblastoma research.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CAR-T cells; Organoid; biobank; cancer modeling; drug testing; glioblastoma; personalized therapies; translational; tumor heterogeneity; xenograft

Mesh:

Year:  2019        PMID: 31883794      PMCID: PMC7556703          DOI: 10.1016/j.cell.2019.11.036

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  89 in total

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3.  Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture.

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Journal:  Nat Methods       Date:  2015-05-25       Impact factor: 28.547

4.  Tangential migration of neuronal precursors of glutamatergic neurons in the adult mammalian brain.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

5.  Purification and use of granzyme B.

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Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

6.  Phase II trial of gefitinib in recurrent glioblastoma.

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Journal:  J Clin Oncol       Date:  2003-11-24       Impact factor: 44.544

7.  Organoid cultures derived from patients with advanced prostate cancer.

Authors:  Dong Gao; Ian Vela; Andrea Sboner; Phillip J Iaquinta; Wouter R Karthaus; Anuradha Gopalan; Catherine Dowling; Jackline N Wanjala; Eva A Undvall; Vivek K Arora; John Wongvipat; Myriam Kossai; Sinan Ramazanoglu; Luendreo P Barboza; Wei Di; Zhen Cao; Qi Fan Zhang; Inna Sirota; Leili Ran; Theresa Y MacDonald; Himisha Beltran; Juan-Miguel Mosquera; Karim A Touijer; Peter T Scardino; Vincent P Laudone; Kristen R Curtis; Dana E Rathkopf; Michael J Morris; Daniel C Danila; Susan F Slovin; Stephen B Solomon; James A Eastham; Ping Chi; Brett Carver; Mark A Rubin; Howard I Scher; Hans Clevers; Charles L Sawyers; Yu Chen
Journal:  Cell       Date:  2014-09-04       Impact factor: 41.582

8.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

9.  ClinVar: public archive of interpretations of clinically relevant variants.

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Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

10.  Human primary liver cancer-derived organoid cultures for disease modeling and drug screening.

Authors:  Laura Broutier; Gianmarco Mastrogiovanni; Monique Ma Verstegen; Hayley E Francies; Lena Morrill Gavarró; Charles R Bradshaw; George E Allen; Robert Arnes-Benito; Olga Sidorova; Marcia P Gaspersz; Nikitas Georgakopoulos; Bon-Kyoung Koo; Sabine Dietmann; Susan E Davies; Raaj K Praseedom; Ruby Lieshout; Jan N M IJzermans; Stephen J Wigmore; Kourosh Saeb-Parsy; Mathew J Garnett; Luc Jw van der Laan; Meritxell Huch
Journal:  Nat Med       Date:  2017-11-13       Impact factor: 53.440

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  167 in total

Review 1.  The neuroscience of sugars in taste, gut-reward, feeding circuits, and obesity.

Authors:  Ranier Gutierrez; Esmeralda Fonseca; Sidney A Simon
Journal:  Cell Mol Life Sci       Date:  2020-01-31       Impact factor: 9.261

2.  Tektin4 loss promotes triple-negative breast cancer metastasis through HDAC6-mediated tubulin deacetylation and increases sensitivity to HDAC6 inhibitor.

Authors:  Li-Ping Ge; Xi Jin; Yun-Song Yang; Xi-Yu Liu; Zhi-Ming Shao; Gen-Hong Di; Yi-Zhou Jiang
Journal:  Oncogene       Date:  2021-03-02       Impact factor: 9.867

3.  Organoid biobanks as a new tool for pre-clinical validation of candidate drug efficacy and safety.

Authors:  Gerardo Botti; Maurizio Di Bonito; Monica Cantile
Journal:  Int J Physiol Pathophysiol Pharmacol       Date:  2021-02-15

Review 4.  The evolution of the cancer stem cell state in glioblastoma: emerging insights into the next generation of functional interactions.

Authors:  Kelly Mitchell; Katie Troike; Daniel J Silver; Justin D Lathia
Journal:  Neuro Oncol       Date:  2021-02-25       Impact factor: 12.300

5.  Sliced Human Cortical Organoids for Modeling Distinct Cortical Layer Formation.

Authors:  Xuyu Qian; Yijing Su; Christopher D Adam; Andre U Deutschmann; Sarshan R Pather; Ethan M Goldberg; Kenong Su; Shiying Li; Lu Lu; Fadi Jacob; Phuong T T Nguyen; Sooyoung Huh; Ahmet Hoke; Sarah E Swinford-Jackson; Zhexing Wen; Xiaosong Gu; R Christopher Pierce; Hao Wu; Lisa A Briand; H Isaac Chen; John A Wolf; Hongjun Song; Guo-Li Ming
Journal:  Cell Stem Cell       Date:  2020-03-05       Impact factor: 24.633

Review 6.  Pre-clinical tumor models of primary brain tumors: Challenges and opportunities.

Authors:  Farhana Akter; Brennan Simon; Nadine Leonie de Boer; Navid Redjal; Hiroaki Wakimoto; Khalid Shah
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2020-10-23       Impact factor: 10.680

7.  Driving sleep.

Authors:  Sian Lewis
Journal:  Nat Rev Neurosci       Date:  2019-07       Impact factor: 34.870

Review 8.  Extracellular Vesicle-Mediated Bilateral Communication between Glioblastoma and Astrocytes.

Authors:  Lisa Nieland; Liza M Morsett; Marike L D Broekman; Xandra O Breakefield; Erik R Abels
Journal:  Trends Neurosci       Date:  2020-11-21       Impact factor: 13.837

9.  Generation and biobanking of patient-derived glioblastoma organoids and their application in CAR T cell testing.

Authors:  Fadi Jacob; Guo-Li Ming; Hongjun Song
Journal:  Nat Protoc       Date:  2020-11-09       Impact factor: 13.491

Review 10.  Tumor organoid models in precision medicine and investigating cancer-stromal interactions.

Authors:  Ren Xu; Xiaotao Zhou; Shike Wang; Christine Trinkle
Journal:  Pharmacol Ther       Date:  2020-08-24       Impact factor: 12.310

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