| Literature DB >> 31876358 |
Annelisa M Cornel1, Celina L Szanto1, Niek P van Til1, Jeroen F van Velzen1, Jaap J Boelens2, Stefan Nierkens1,3.
Abstract
In the last decade, screening compound libraries on live cells has become an important step in drug discovery. The abundance of compounds in these libraries requires effective high-throughput (HT) analyzing methods. Although current cell-based assay protocols are suitable for HT analyses, the analysis itself is often restrained to simple, singular outcomes. Incorporation of HT samplers on flow cytometers has provided an interesting approach to increase the number of measurable parameters and increase the sensitivity and specificity of analyses. Nonetheless, to date, the labor intensive and time-consuming strategies to detach and stain adherent cells before flow cytometric analysis has restricted use of HT flow cytometry (HTFC) to suspension cells. We have developed a universal "no-touch" HTFC antibody staining protocol in 384-well microplates to bypass washing and centrifuging steps of conventional flow cytometry protocols. Optimizing culture conditions, cell-detachment and staining strategies in 384-well microplates resulted in an HTFC protocol with an optimal stain index with minimal background staining. The method has been validated using six adherent cell lines and simultaneous staining of four parameters. This HT screening protocol allows for effective monitoring of multiple cellular markers simultaneously, thereby increasing informativity and cost-effectiveness of drug screening.Entities:
Keywords: adherent Cells; compound library screening; flow Cytometry; high-throughput screening
Year: 2019 PMID: 31876358 PMCID: PMC7496799 DOI: 10.1002/cyto.a.23956
Source DB: PubMed Journal: Cytometry A ISSN: 1552-4922 Impact factor: 4.355
Figure 1Optimization of flow cytometric cell retrieval using GIMEN cells. An over 12‐fold increase in single‐cell retrieval is observed upon sample preparation optimization. (A) Bar graph representing average single‐cell retrieval prior to and after optimization. Before optimization: n = 60, after optimization: n = 7,153. (B) Graphical display of flow cytometric cell retrieval when increasing cell‐seeding density. (C) Graphical display of cell retrieval after incubation with increasing EDTA concentrations at a seeding density of 4,500 cells/well, n = 2 per group. (D) Cell retrieval when well volume is 30 μL (low volume) or 80 μl (high volume). Graphs: Dots reflect mean, error bars reflect SD between samples, n = 6 per group unless otherwise indicated. Mann–Whitney U‐test was performed, p < 0.05 was considered significant. SD = standard deviation.
Figure 2Antibody staining optimization in GIMEN cells. (A) The optimized HTFC staining protocol (right) shows similar expression patterns to a typical conventional staining protocol (left). Z‐score of expression in untreated versus TNF‐α‐treated cells is 49 (X = 1911, μ = 217, σ = 35), and 94 (X = 3,466, μ = 217, σ = 35) in TNF‐α + IFN‐γ treated cells (n = 8 per group). (B) HLA‐ABC background staining decreases when antibody concentration (ng/μL) decreases. The dashed line represents the unstained control. (C) Histograms depicting HLA‐ABC MFIs of untreated and TNF‐α + IFN‐γ‐treated samples with diluting antibody concentrations. The stain index decreases when antibody concentration is reduced. Data shown are from a representative experiment using the HTFC protocol on GIMEN neuroblastoma cells. MFI = mean fluorescent intensity.
Figure 3Multiplexed antibody staining in GIMEN cells. Multiplexing antibody staining using the HTFC protocol is technically feasible and as effective as singular staining. (A) HLA‐ABC MFI in untreated controls (left) and TNF‐α + IFN‐γ‐treated cells (right). Top graphs show the MFI in multiplexed stained samples, lower graphs show MFIs in single stained samples. (B) NFkB‐GFP‐reporter × HLA‐ABC. Treatment of GIMEN NFkB GFP reporter cells with TNF‐α or IFN‐γ shows dependence of TNF‐α induced upregulation of MHC‐I, and independence of IFN‐γ induced upregulation. Left graph: untreated control, middle graph: TNF‐α‐treated cells, right graph: IFN‐γ‐treated cells. Data shown are from a representative experiment using the HTFC protocol on GIMEN neuroblastoma cells. MFI = mean fluorescent intensity.