Literature DB >> 20151227

Cell-based assays for high-throughput screening.

W Frank An1, Nicola Tolliday.   

Abstract

Cell-based assays represent approximately half of all high-throughput screens currently performed. Here, we review in brief the history and status of high-throughput screening (HTS), and summarize some of the challenges and benefits associated with the use of cell-based assays in HTS. Approaches for successful experimental design and execution of cell-based screens are introduced, including strategies for assay development, implementation of primary and secondary screens, and target identification. In doing so, we hope to provide a comprehensive review of the cell-based HTS process and an introduction to the methodologies and techniques used.

Mesh:

Year:  2010        PMID: 20151227     DOI: 10.1007/s12033-010-9251-z

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  64 in total

Review 1.  High-throughput screening: new technology for the 21st century.

Authors:  R P Hertzberg; A J Pope
Journal:  Curr Opin Chem Biol       Date:  2000-08       Impact factor: 8.822

2.  Systems-based design of bi-ligand inhibitors of oxidoreductases: filling the chemical proteomic toolbox.

Authors:  Daniel S Sem; Bonnie Bertolaet; Brian Baker; Edcon Chang; Aurora D Costache; Stephen Coutts; Qing Dong; Mark Hansen; Victor Hong; Xuemei Huang; Richard M Jack; Richard Kho; Henk Lang; Chen-Ting Ma; David Meininger; Maurizio Pellecchia; Fabrice Pierre; Hugo Villar; Lin Yu
Journal:  Chem Biol       Date:  2004-02

Review 3.  Target identification in chemical genetics: the (often) missing link.

Authors:  Lyle Burdine; Thomas Kodadek
Journal:  Chem Biol       Date:  2004-05

Review 4.  Photo-affinity labeling strategies in identifying the protein ligands of bioactive small molecules: examples of targeted synthesis of drug analog photoprobes.

Authors:  Jerry R Colca; George G Harrigan
Journal:  Comb Chem High Throughput Screen       Date:  2004-11       Impact factor: 1.339

5.  High-throughput screening of low molecular weight NS3-NS4A protease inhibitors using a fluorescence resonance energy transfer substrate.

Authors:  Kenji Sudo; Kayo Yamaji; Kouich Kawamura; Tomoko Nishijima; Naoko Kojima; Kazuhiko Aibe; Kunitada Shimotohno; Yasuaki Shimizu
Journal:  Antivir Chem Chemother       Date:  2005

6.  Identifying the proteins to which small-molecule probes and drugs bind in cells.

Authors:  Shao-En Ong; Monica Schenone; Adam A Margolin; Xiaoyu Li; Kathy Do; Mary K Doud; D R Mani; Letian Kuai; Xiang Wang; John L Wood; Nicola J Tolliday; Angela N Koehler; Lisa A Marcaurelle; Todd R Golub; Robert J Gould; Stuart L Schreiber; Steven A Carr
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-02       Impact factor: 11.205

7.  A cell-based cGMP assay useful for ultra-high-throughput screening and identification of modulators of the nitric oxide/cGMP pathway.

Authors:  Frank Wunder; Johannes-Peter Stasch; Joachim Hütter; Cristina Alonso-Alija; Jörg Hüser; Emanuel Lohrmann
Journal:  Anal Biochem       Date:  2005-04-01       Impact factor: 3.365

8.  A cytosolic binding protein for the immunosuppressant FK506 has peptidyl-prolyl isomerase activity but is distinct from cyclophilin.

Authors:  J J Siekierka; S H Hung; M Poe; C S Lin; N H Sigal
Journal:  Nature       Date:  1989-10-26       Impact factor: 49.962

9.  Complete amino acid sequence of the FK506 and rapamycin binding protein, FKBP, isolated from calf thymus.

Authors:  W S Lane; A Galat; M W Harding; S L Schreiber
Journal:  J Protein Chem       Date:  1991-04

10.  High-throughput screen for novel antimicrobials using a whole animal infection model.

Authors:  Terence I Moy; Annie L Conery; Jonah Larkins-Ford; Gang Wu; Ralph Mazitschek; Gabriele Casadei; Kim Lewis; Anne E Carpenter; Frederick M Ausubel
Journal:  ACS Chem Biol       Date:  2009-07-17       Impact factor: 5.100

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  49 in total

1.  An automated high throughput screening-compatible assay to identify regulators of stem cell neural differentiation.

Authors:  Laura Casalino; Dario Magnani; Sandro De Falco; Stefania Filosa; Gabriella Minchiotti; Eduardo J Patriarca; Dario De Cesare
Journal:  Mol Biotechnol       Date:  2012-03       Impact factor: 2.695

Review 2.  Chemical approaches to study metabolic networks.

Authors:  Daniel Medina-Cleghorn; Daniel K Nomura
Journal:  Pflugers Arch       Date:  2013-01-08       Impact factor: 3.657

Review 3.  HTS/HCS to screen molecules able to maintain embryonic stem cell self-renewal or to induce differentiation: overview of protocols.

Authors:  Genesia Manganelli; Ugo Masullo; Stefania Filosa
Journal:  Stem Cell Rev Rep       Date:  2014-12       Impact factor: 5.739

4.  Adenylate kinase release as a high-throughput-screening-compatible reporter of bacterial lysis for identification of antibacterial agents.

Authors:  Anna C Jacobs; Louis Didone; Jennielle Jobson; Madeline K Sofia; Damian Krysan; Paul M Dunman
Journal:  Antimicrob Agents Chemother       Date:  2012-10-01       Impact factor: 5.191

5.  Flow cytometry enables a high-throughput homogeneous fluorescent antibody-binding assay for cytotoxic T cell lytic granule exocytosis.

Authors:  Amy E Florian; Christopher K Lepensky; Ohyun Kwon; Mark K Haynes; Larry A Sklar; Adam Zweifach
Journal:  J Biomol Screen       Date:  2012-11-15

6.  Trypanocidal and cysteine protease inhibitory activity of isopentyl caffeate is not linked in Trypanosoma brucei.

Authors:  Dietmar Steverding; Flávio Rogério da Nóbrega; Stuart A Rushworth; Damião Pergentino de Sousa
Journal:  Parasitol Res       Date:  2016-08-18       Impact factor: 2.289

Review 7.  Phenotypic screens as a renewed approach for drug discovery.

Authors:  Wei Zheng; Natasha Thorne; John C McKew
Journal:  Drug Discov Today       Date:  2013-07-09       Impact factor: 7.851

8.  Micropatterning of Aptamer Beacons to Create Cytokine-Sensing Surfaces.

Authors:  Nazgul Tuleuova; Alexander Revzin
Journal:  Cell Mol Bioeng       Date:  2010-11-20       Impact factor: 2.321

Review 9.  Small molecule screening in human induced pluripotent stem cell-derived terminal cell types.

Authors:  Sandra J Engle; Fabien Vincent
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

Review 10.  Matching the power of high throughput screening to the chemical diversity of natural products.

Authors:  Curtis J Henrich; John A Beutler
Journal:  Nat Prod Rep       Date:  2013-08-08       Impact factor: 13.423

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