Literature DB >> 3186699

Recognition helices of lac and lambda repressor are oriented in opposite directions and recognize similar DNA sequences.

N Lehming1, J Sartorius, S Oehler, B von Wilcken-Bergmann, B Müller-Hill.   

Abstract

Exchanges in positions 1 and 2 of the putative recognition helix allow lac repressor to bind to ideal lac operator variants in which base pair 4 has been replaced. We show here that an Arg-22----Asn exchange in position 6 of the putative recognition helix of lac repressor abolishes lac repressor binding to ideal lac operator. This lac repressor variant, however, binds to a variant of the ideal lac operator 5' TTTGAGCGCTCAAA 3' in which the original G.C of position 6 has been replaced by T.A. This result and our previous data confirm our suggestion that the N terminus of the recognition helix of lac repressor enters the major groove close to the center of symmetry of lac operator and that its C terminus leaves the major groove further away from the center of symmetry. The consequences of this model are discussed in regard to various phage and bacterial repressor operator systems.

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Year:  1988        PMID: 3186699      PMCID: PMC282330          DOI: 10.1073/pnas.85.21.7947

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

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Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

2.  Genetic map of the lactose repressor gene (i) of Escherichia coli.

Authors:  M Pfahl
Journal:  Genetics       Date:  1972-11       Impact factor: 4.562

3.  The amino-acid sequence of lac repressor.

Authors:  K Beyreuther; K Adler; N Geisler; A Klemm
Journal:  Proc Natl Acad Sci U S A       Date:  1973-12       Impact factor: 11.205

4.  How lac repressor binds to DNA.

Authors:  K Adler; K Beyreuther; E Fanning; N Geisler; B Gronenborn; A Klemm; B Müller-Hill; M Pfahl; A Schmitz
Journal:  Nature       Date:  1972-06-09       Impact factor: 49.962

5.  Cloning and sequence of the crp gene of Escherichia coli K 12.

Authors:  P Cossart; B Gicquel-Sanzey
Journal:  Nucleic Acids Res       Date:  1982-02-25       Impact factor: 16.971

6.  Primary structure of the phage P22 repressor and its gene c2.

Authors:  R T Sauer; J Pan; P Hopper; K Hehir; J Brown; A R Poteete
Journal:  Biochemistry       Date:  1981-06-09       Impact factor: 3.162

7.  Amino acid sequence of Cro regulatory protein of bacteriophage lambda.

Authors:  M W Hsiang; R D Cole; Y Takeda; H Echols
Journal:  Nature       Date:  1977-11-17       Impact factor: 49.962

8.  Specific binding of the lambda phage repressor to lambda DNA.

Authors:  M Ptashne
Journal:  Nature       Date:  1967-04-15       Impact factor: 49.962

9.  Model of specific complex between catabolite gene activator protein and B-DNA suggested by electrostatic complementarity.

Authors:  I T Weber; T A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

10.  The nucleotide sequence of the lactose messenger ribonucleic acid transcribed from the UV5 promoter mutant of Escherichia coli.

Authors:  N M Maizels
Journal:  Proc Natl Acad Sci U S A       Date:  1973-12       Impact factor: 11.205

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  25 in total

1.  A study of the CopF repressor of plasmid pAMbeta1 by phage display.

Authors:  E d'Alençon; S D Ehrlich
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

2.  Specific contacts between residues in the DNA-binding domain of the TyrR protein and bases in the operator of the tyrP gene of Escherichia coli.

Authors:  J S Hwang; J Yang; A J Pittard
Journal:  J Bacteriol       Date:  1999-04       Impact factor: 3.490

3.  Specificities of three tight-binding Lac repressors.

Authors:  P Kolkhof
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

4.  Control of gal transcription through DNA looping: inhibition of the initial transcribing complex.

Authors:  H E Choy; S Adhya
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

5.  Sliding and intermolecular transfer of the lac repressor: kinetic perturbation of a reaction intermediate by a distant DNA sequence.

Authors:  T Ruusala; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-01       Impact factor: 11.205

6.  "Cold-sensitive" mutants of the Lac repressor.

Authors:  Andrew Barker; Stefan Oehler; Benno Müller-Hill
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

7.  Orientation of the Lac repressor DNA binding domain in complex with the left lac operator half site characterized by affinity cleaving.

Authors:  J A Shin; R H Ebright; P B Dervan
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

8.  Towards evolving a better repressor.

Authors:  Robert Daber; Mitchell Lewis
Journal:  Protein Eng Des Sel       Date:  2009-09-02       Impact factor: 1.650

9.  Identification of a contact between arginine-180 of the catabolite gene activator protein (CAP) and base pair 5 of the DNA site in the CAP-DNA complex.

Authors:  X P Zhang; R H Ebright
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

10.  Recognition of DNA by single-chain derivatives of the phage 434 repressor: high affinity binding depends on both the contacted and non-contacted base pairs.

Authors:  J Chen; S Pongor; A Simoncsits
Journal:  Nucleic Acids Res       Date:  1997-06-01       Impact factor: 16.971

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