Literature DB >> 31863235

Statistical optimisation of growth conditions and diesel degradation by the Antarctic bacterium, Rhodococcus sp. strain AQ5‒07.

Ahmad Fareez Ahmad Roslee1, Nur Nadhirah Zakaria1, Peter Convey2, Azham Zulkharnain3, Gillian Li Yin Lee1, Claudio Gomez-Fuentes4, Siti Aqlima Ahmad5.   

Abstract

Petroleum pollution is a major concern in Antarctica due to the persistent nature of its hydrocarbon components coupled with the region's extreme environmental conditions, which means that bioremediation approaches are largely inapplicable at present. The current study assessed the ability of the psychrotolerant phenol-degrader, Rhodococcus sp. strain AQ5-07, to assimilate diesel fuel as the sole carbon source. Factors expected to influence the efficiency of diesel degradation, including the initial hydrocarbon concentration, nitrogen source concentration and type, temperature, pH and salinity were studied. Strain AQ5-07 displayed optimal cell growth and biodegradation activity at 1% v/v initial diesel concentration, 1 g/L NH4Cl concentration, pH 7 and 1% NaCl during one-factor-at-a-time (OFAT) analyses. Strain AQ5-07 was psychrotolerant based on its optimum growth temperature being near 20 °C. In conventionally optimised media, strain AQ5-07 showed total petroleum hydrocarbons (TPH) mineralisation of 75.83%. However, the optimised condition for TPH mineralisation predicted through statistical response surface methodology (RSM) enhanced the reduction to 90.39% within a 2 days incubation. Our preliminary data support strain AQ5-07 being a potential candidate for real-field soil bioremediation by specifically adopting sludge-phase bioreactor system in chronically cold environments such as Antarctica. The study also confirmed the utility of RSM in medium optimisation.

Entities:  

Keywords:  Antarctica; Biodegradation; Diesel; Response-surface methodology (RSM); Rhodococcus sp. Strain AQ5-07

Mesh:

Substances:

Year:  2019        PMID: 31863235     DOI: 10.1007/s00792-019-01153-0

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  43 in total

1.  The biodegradation efficiency on diesel oil by two psychrotrophic Antarctic marine bacteria during a two-month-long experiment.

Authors:  Luigi Michaud; Angelina Lo Giudice; Marcello Saitta; Maria De Domenico; Vivia Bruni
Journal:  Mar Pollut Bull       Date:  2004-09       Impact factor: 5.553

2.  Characterization of a diesel-degrading strain isolated from a hydrocarbon-contaminated site.

Authors:  M Y Shukor; F A Dahalan; A Z Jusoh; R Muse; N A Shamaan; M A Syed
Journal:  J Environ Biol       Date:  2009-01

3.  The Utilization of Certain Hydrocarbons by Microorganisms.

Authors:  L D Bushnell; H F Haas
Journal:  J Bacteriol       Date:  1941-05       Impact factor: 3.490

Review 4.  Epoxy Coenzyme A Thioester pathways for degradation of aromatic compounds.

Authors:  Wael Ismail; Johannes Gescher
Journal:  Appl Environ Microbiol       Date:  2012-05-11       Impact factor: 4.792

Review 5.  Bioaugmentation as a strategy for cleaning up of soils contaminated with aromatic compounds.

Authors:  Agnieszka Mrozik; Zofia Piotrowska-Seget
Journal:  Microbiol Res       Date:  2009-09-06       Impact factor: 5.415

6.  Optimisation of culture composition for glyphosate degradation by Burkholderia vietnamiensis strain AQ5-12.

Authors:  Motharasan Manogaran; Mohd Yunus Shukor; Nur Adeela Yasid; Khalilah Abdul Khalil; Siti Aqlima Ahmad
Journal:  3 Biotech       Date:  2018-02-02       Impact factor: 2.406

7.  Persistent organic pollutants and polycyclic aromatic hydrocarbons in penguins of the genus Pygoscelis in Admiralty Bay - An Antarctic specially managed area.

Authors:  Rosalinda C Montone; Satie Taniguchi; Fernanda I Colabuono; César C Martins; Caio Vinícius Z Cipro; Hileia S Barroso; Josilene da Silva; Márcia C Bícego; Rolf R Weber
Journal:  Mar Pollut Bull       Date:  2016-03-04       Impact factor: 5.553

8.  Degradation of a mixture of hydrocarbons, gasoline, and diesel oil additives by Rhodococcus aetherivorans and Rhodococcus wratislaviensis.

Authors:  Marc Auffret; Diane Labbé; Gérald Thouand; Charles W Greer; Françoise Fayolle-Guichard
Journal:  Appl Environ Microbiol       Date:  2009-10-16       Impact factor: 4.792

9.  Application of response surface methodology for optimising caffeine-degrading parameters by Leifsonia sp. strain SIU.

Authors:  Salihu Ibrahim; Mohd Yunus Shukor; Khalilah Abdul Khalil; Mohd Izuan Effendi Halmi; Mohd Arif Syed; Siti Aqlima Ahmad
Journal:  J Environ Biol       Date:  2015-09

10.  Determination of polycyclic aromatic hydrocarbons (PAHs) and other organic pollutants in freshwaters on the western shore of Admiralty Bay (King George Island, Maritime Antarctica).

Authors:  Małgorzata Szopińska; Danuta Szumińska; Robert Józef Bialik; Tomasz Dymerski; Erwin Rosenberg; Żaneta Polkowska
Journal:  Environ Sci Pollut Res Int       Date:  2019-04-29       Impact factor: 4.223

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  11 in total

1.  Temperature- and Nutrients-Induced Phenotypic Changes of Antarctic Green Snow Bacteria Probed by High-Throughput FTIR Spectroscopy.

Authors:  Margarita Smirnova; Valeria Tafintseva; Achim Kohler; Uladzislau Miamin; Volha Shapaval
Journal:  Biology (Basel)       Date:  2022-06-09

Review 2.  A Review and Bibliometric Analysis on Applications of Microbial Degradation of Hydrocarbon Contaminants in Arctic Marine Environment at Metagenomic and Enzymatic Levels.

Authors:  Gayathiri Verasoundarapandian; Chiew-Yen Wong; Noor Azmi Shaharuddin; Claudio Gomez-Fuentes; Azham Zulkharnain; Siti Aqlima Ahmad
Journal:  Int J Environ Res Public Health       Date:  2021-02-09       Impact factor: 3.390

3.  Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07.

Authors:  Gillian Li Yin Lee; Nur Nadhirah Zakaria; Peter Convey; Hiroyuki Futamata; Azham Zulkharnain; Kenshi Suzuki; Khalilah Abdul Khalil; Noor Azmi Shaharuddin; Siti Aisyah Alias; Gerardo González-Rocha; Siti Aqlima Ahmad
Journal:  Int J Mol Sci       Date:  2020-12-09       Impact factor: 5.923

Review 4.  Research Trends of Biodegradation of Cooking Oil in Antarctica from 2001 to 2021: A Bibliometric Analysis Based on the Scopus Database.

Authors:  Khadijah Nabilah Mohd Zahri; Azham Zulkharnain; Suriana Sabri; Claudio Gomez-Fuentes; Siti Aqlima Ahmad
Journal:  Int J Environ Res Public Health       Date:  2021-02-19       Impact factor: 3.390

Review 5.  Diesel in Antarctica and a Bibliometric Study on Its Indigenous Microorganisms as Remediation Agent.

Authors:  Rasidnie Razin Wong; Zheng Syuen Lim; Noor Azmi Shaharuddin; Azham Zulkharnain; Claudio Gomez-Fuentes; Siti Aqlima Ahmad
Journal:  Int J Environ Res Public Health       Date:  2021-02-05       Impact factor: 3.390

Review 6.  Bibliometric Analysis of Hydrocarbon Bioremediation in Cold Regions and a Review on Enhanced Soil Bioremediation.

Authors:  How Swen Yap; Nur Nadhirah Zakaria; Azham Zulkharnain; Suriana Sabri; Claudio Gomez-Fuentes; Siti Aqlima Ahmad
Journal:  Biology (Basel)       Date:  2021-04-22

7.  The Use of Response Surface Methodology as a Statistical Tool for the Optimisation of Waste and Pure Canola Oil Biodegradation by Antarctic Soil Bacteria.

Authors:  Khadijah Nabilah Mohd Zahri; Azham Zulkharnain; Claudio Gomez-Fuentes; Suriana Sabri; Khalilah Abdul Khalil; Peter Convey; Siti Aqlima Ahmad
Journal:  Life (Basel)       Date:  2021-05-20

8.  Statistical Optimisation of Diesel Biodegradation at Low Temperatures by an Antarctic Marine Bacterial Consortium Isolated from Non-Contaminated Seawater.

Authors:  Nur Nadhirah Zakaria; Claudio Gomez-Fuentes; Khalilah Abdul Khalil; Peter Convey; Ahmad Fareez Ahmad Roslee; Azham Zulkharnain; Suriana Sabri; Noor Azmi Shaharuddin; Leyla Cárdenas; Siti Aqlima Ahmad
Journal:  Microorganisms       Date:  2021-06-03

9.  Biosurfactant Production and Growth Kinetics Studies of the Waste Canola Oil-Degrading Bacterium Rhodococcus erythropolis AQ5-07 from Antarctica.

Authors:  Salihu Ibrahim; Khalilah Abdul Khalil; Khadijah Nabilah Mohd Zahri; Claudio Gomez-Fuentes; Peter Convey; Azham Zulkharnain; Suriana Sabri; Siti Aisyah Alias; Gerardo González-Rocha; Siti Aqlima Ahmad
Journal:  Molecules       Date:  2020-08-26       Impact factor: 4.411

10.  Soil microbiota and microarthropod communities in oil contaminated sites in the European Subarctic.

Authors:  E N Melekhina; E S Belykh; M Yu Markarova; A A Taskaeva; E E Rasova; O A Baturina; M R Kabilov; I O Velegzhaninov
Journal:  Sci Rep       Date:  2021-10-04       Impact factor: 4.379

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