| Literature DB >> 31856747 |
Jane Mumma1, Sheillah Simiyu2, Evalyne Aseyo3, John Anderson4, Alexandra Czerniewska5, Elizabeth Allen6, Robert Dreibelbis5, Kelly K Baker7, Oliver Cumming8.
Abstract
BACKGROUND: Symptomatic and asymptomatic enteric infections in early childhood are associated with negative effects on childhood growth and development, especially in low and middle-income countries, and food may be an important transmission route. Although basic food hygiene practices might reduce exposure to faecal pathogens and resulting infections, there have been few rigorous interventions studies to assess this, and no studies in low income urban settings where risks are plausibly very high. The aim of this study is to evaluate the impact of a novel infant food hygiene intervention on infant enteric infections and diarrhoea in peri-urban settlements of Kisumu, Kenya.Entities:
Keywords: Child food; Diarrhoea; Enteric infections; Hygiene; Infant food; Kenya; Kisumu
Mesh:
Substances:
Year: 2019 PMID: 31856747 PMCID: PMC6923833 DOI: 10.1186/s12879-019-4657-0
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1– CONSORT diagram
– Specific enteric pathogen primers and probes for TaqMan Array Card used to determine the primary outcome
| PATHOGEN | GENE TARGET | FORWARD PRIMER | REVERSE PRIMER | PROBE SEQUENCE | Ref |
|---|---|---|---|---|---|
| BACTERIA | |||||
| Aeromonas | Aerolysin | TYCGYTACCAGTGGGACAAG | CCRGCAAACTGGCTCTCG | CAGTTCCAGTCCCACCACTT | [ |
| CTGCTAAACCATAGAAATAAAATTTCTCAC | CTTTGAAGGTAATTTAGATATGGATAATCG | CATTTTGACGATTTTTGGCTTGA | [ | ||
| GGTATTACCTAATGCTCCAAATAG | TTTGTGCCATCATTTTCTAAGC | CCTGGTGTCCATCCTGTTTC | [ | ||
| Enteroaggregative | ATTGTCCTCAGGCATTTCAC | ACGACACCCCTGATAAACAA | TAGTGCATACTCATCATTTAAG | [ | |
| Enteroaggregative | CTGGCGAAAGACTGTATCAT | TTTTGCTTCATAAGCCGATAGA | TGGTTCTCATCTATTACAGACAGC | [ | |
| Enterohemorrhagic | TTTCACACTTATTGGATGGTCTCAA | CGATGAGTTTATCTGCAAGGTGAT | CTCTCTTTCCTCTGCGGTCCT | [ | |
Enteropathogenic | CATTGATCAGGATTTTTCTGGTGATA | CTCATGCGGAAATAGCCGTTA | ATACTGGCGAGACTATTTCAA | [ | |
Enteropathogenic | TGGTGCTTGCGCTTGCT | CGTTGCGCTCATTACTTCTG | CAGTCTGCGTCTGATTCCAA | [ | |
Enterotoxigenic | ETEC LT | TTCCCACCGGATCACCAA | CAACCTTGTGGTGCATGATGA | CTTGGAGAGAAGAACCCT | [ |
Enterotoxigenic | STh STp | GCTAAACCAGYAGRGTCTTCAAAATGAATCACTTGACTCTTCAAAA | CCCGGTACARGCAGGATTACAACATGAATCACTTGACTCTTCAAAA | TGGTCCTGAAAGCATGAATGAACAACACATTTTACTGCT | [ |
| CTCACCAGGAGATTACAACATGG | AGCTCAGACCAAAAGTGACCATC | CACCGACGGCGAGACCGACTTT | [ | ||
| TCAGAAAGGTAATTGGCATGGA | AGAACCGCGCCCAAAGA | AGGGCGGAATATT | [ | ||
| ATCGTCAGTTTGGAGCCAGT | TCGATGCGTTAAACACGAAG | ACCGATGCGATTGCCCAA | [ | ||
| MS2 | MS2g1 | TGGCACTACCCCTCTCCGTATTCAC | GTACGGGCGACCCCACGATGAC | CACATCGATAGATCAAGGTGCCTACAAGC | [ |
| VIRUS | |||||
| Adenovirus 40–41 | Fiber Gene | AACTTTCTCTCTTAATAGACGCC | AGGGGGCTAGAAAACAAAA | CTGACACGGGCACTCT | [ |
| Adenovirus broad species | Hexon | GCCACGGTGGGGTTTCTAAACTT | GCCCCAGTGGTCTTACATGCACATC | TGCACCAGACCCGGGCTCAG | [ |
| Norovirus GI | ORF 1–2 | CGYTGGATGCGNTTYCATGA | CTTAGACGCCATCATCATTYAC | TGGACAGGAGATCGC | [ |
| Norovirus GII | ORF 1–2 | CARGARBCNATGTTYAGR TGGATGAG | TCGACGCCATCTTCATTCACA | TGGGAGGGCGATCGCAATCT | [ |
| Rotavirus | NSP3 | ACCATCTWCACRTRACCCTCTATGAG | GGTCACATAACGCCCCTATAGC | AGTTAAAAGCTAACACTGTCAAA | [ |
| PROTOZOAN | |||||
| TTCCGCCGTACACCTGTC | GCGCTGCTATCCTCAACTG | ATTGCGGCAAACACGTCA | [ | ||
| GATGAACGCAAGGCCAATAA | CTTTGATTCTCCAATCTCCTTCTT | AATATTGCTCAGCTCGAGGC | [ | ||
| 18 s rRNA | GGGTTGTATTTATTAGATAAAGAACCA | AGGCCAATACCCTACCGTCT | TGACATATCATTCAAGTTTCTGAC | [ | |
| LIB13 | TCCTTGAAATGAATATTTGTGACTCG | AAATGTGGTAGTTGCGGTTGAAA | CTTACTTCGTGGCGGCGT | [ | |
| LIB13 | TCCTTGAAATGAATATTTGTGACTCG | TTAATGTGGTAGTTGCGGTTGAAC | TATCTCTTCGTAGCGGCGTA | [ | |
Fig. 2– Map showing Safe Start study areas of Nyalenda A and B (pink), two of the informal neighbourhoods around Kisumu Town in Kisumu County, Kenya
Fig. 3Intervention and Data Collection Schedule