Literature DB >> 31855788

Exploring QSAR modeling of toxicity of chemicals on earthworm.

Sulekha Ghosh1, Probir Kumar Ojha1, Edoardo Carnesecchi2, Anna Lombardo3, Kunal Roy4, Emilio Benfenati5.   

Abstract

Earthworm provides sustainability towards the agroecosystem which can be degraded day by day by the extensive use of pesticides (e.g., fungicides, insecticides and herbicides). The present study attempts to develop a predictive quantitative structure-activity relationship (QSAR) model for toxicity of pesticides to earthworm in order to give a suitable guidance for designing new analogues with lower toxicity by exploring the important chemical features which are required to develop safer alternatives. The QSAR model was developed by using the negative logarithm of lethal concentration (pLC50) values of pesticides towards earthworm. We have used various 2D descriptors along with extended topochemical atom (ETA) indices as independent variables for the development of the model. The developed partial least squares (PLS) model was subjected to statistical validation tests proving that the model is statistically reliable and robust (R2 = 0.765, Q2 = 0.614, Q2F1 = 0.734, Q2F2 = 0.713). The contributing descriptors in the model suggested that the pesticides may affect the earthworm nucleic acid through various physicochemical interactions including hydrophobicity, hydrogen bonding, electron donor acceptor complex formation, π-π stacking interaction and charge transfer complex formation.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Argoecosystem; Earthworm; PLS; QSAR; Toxicity

Mesh:

Substances:

Year:  2019        PMID: 31855788     DOI: 10.1016/j.ecoenv.2019.110067

Source DB:  PubMed          Journal:  Ecotoxicol Environ Saf        ISSN: 0147-6513            Impact factor:   6.291


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2.  In Silico Methods for Environmental Risk Assessment: Principles, Tiered Approaches, Applications, and Future Perspectives.

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