Literature DB >> 31853395

Deep learning-based automated detection of retinal diseases using optical coherence tomography images.

Feng Li1, Hua Chen1, Zheng Liu1, Xue-Dian Zhang1, Min-Shan Jiang1,2, Zhi-Zheng Wu3, Kai-Qian Zhou4.   

Abstract

Retinal disease classification is a significant problem in computer-aided diagnosis (CAD) for medical applications. This paper is focused on a 4-class classification problem to automatically detect choroidal neovascularization (CNV), diabetic macular edema (DME), DRUSEN, and NORMAL in optical coherence tomography (OCT) images. The proposed classification algorithm adopted an ensemble of four classification model instances to identify retinal OCT images, each of which was based on an improved residual neural network (ResNet50). The experiment followed a patient-level 10-fold cross-validation process, on development retinal OCT image dataset. The proposed approach achieved 0.973 (95% confidence interval [CI], 0.971-0.975) classification accuracy, 0.963 (95% CI, 0.960-0.966) sensitivity, and 0.985 (95% CI, 0.983-0.987) specificity at the B-scan level, achieving a matching or exceeding performance to that of ophthalmologists with significant clinical experience. Other performance measures used in the study were the area under receiver operating characteristic curve (AUC) and kappa value. The observations of the study implied that multi-ResNet50 ensembling was a useful technique when the availability of medical images was limited. In addition, we performed qualitative evaluation of model predictions, and occlusion testing to understand the decision-making process of our model. The paper provided an analytical discussion on misclassification and pathology regions identified by the occlusion testing also. Finally, we explored the effect of the integration of retinal OCT images and medical history data from patients on model performance.
© 2019 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2019        PMID: 31853395      PMCID: PMC6913386          DOI: 10.1364/BOE.10.006204

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  36 in total

Review 1.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

2.  Automatic Identification of Pathology-Distorted Retinal Layer Boundaries Using SD-OCT Imaging.

Authors:  Md Akter Hussain; Alauddin Bhuiyan; Andrew Turpin; Chi D Luu; R Theodore Smith; Robyn H Guymer; Ramamohanrao Kotagiri
Journal:  IEEE Trans Biomed Eng       Date:  2016-10-19       Impact factor: 4.538

3.  Can we open the black box of AI?

Authors:  Davide Castelvecchi
Journal:  Nature       Date:  2016-10-06       Impact factor: 49.962

4.  Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search.

Authors:  Leyuan Fang; David Cunefare; Chong Wang; Robyn H Guymer; Shutao Li; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2017-04-27       Impact factor: 3.732

5.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

Review 6.  Deep learning applications in ophthalmology.

Authors:  Ehsan Rahimy
Journal:  Curr Opin Ophthalmol       Date:  2018-05       Impact factor: 3.761

7.  ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks.

Authors:  Abhijit Guha Roy; Sailesh Conjeti; Sri Phani Krishna Karri; Debdoot Sheet; Amin Katouzian; Christian Wachinger; Nassir Navab
Journal:  Biomed Opt Express       Date:  2017-07-13       Impact factor: 3.732

8.  IDENTIFICATION OF FLUID ON OPTICAL COHERENCE TOMOGRAPHY BY TREATING OPHTHALMOLOGISTS VERSUS A READING CENTER IN THE COMPARISON OF AGE-RELATED MACULAR DEGENERATION TREATMENTS TRIALS.

Authors:  Cynthia A Toth; Francis Char Decroos; Gui-Shuang Ying; Sandra S Stinnett; Cynthia S Heydary; Russell Burns; Maureen Maguire; Daniel Martin; Glenn J Jaffe
Journal:  Retina       Date:  2015-07       Impact factor: 4.256

9.  Automated Grading of Age-Related Macular Degeneration From Color Fundus Images Using Deep Convolutional Neural Networks.

Authors:  Philippe M Burlina; Neil Joshi; Michael Pekala; Katia D Pacheco; David E Freund; Neil M Bressler
Journal:  JAMA Ophthalmol       Date:  2017-11-01       Impact factor: 7.389

10.  Classification of healthy and diseased retina using SD-OCT imaging and Random Forest algorithm.

Authors:  Md Akter Hussain; Alauddin Bhuiyan; Chi D Luu; R Theodore Smith; Robyn H Guymer; Hiroshi Ishikawa; Joel S Schuman; Kotagiri Ramamohanarao
Journal:  PLoS One       Date:  2018-06-04       Impact factor: 3.240

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  13 in total

1.  Towards label-free 3D segmentation of optical coherence tomography images of the optic nerve head using deep learning.

Authors:  Sripad Krishna Devalla; Tan Hung Pham; Satish Kumar Panda; Liang Zhang; Giridhar Subramanian; Anirudh Swaminathan; Chin Zhi Yun; Mohan Rajan; Sujatha Mohan; Ramaswami Krishnadas; Vijayalakshmi Senthil; John Mark S De Leon; Tin A Tun; Ching-Yu Cheng; Leopold Schmetterer; Shamira Perera; Tin Aung; Alexandre H Thiéry; Michaël J A Girard
Journal:  Biomed Opt Express       Date:  2020-10-15       Impact factor: 3.732

2.  Diving Deep into Deep Learning: An Update on Artificial Intelligence in Retina.

Authors:  Brian E Goldhagen; Hasenin Al-Khersan
Journal:  Curr Ophthalmol Rep       Date:  2020-06-07

3.  Deep Residual Network for Diagnosis of Retinal Diseases Using Optical Coherence Tomography Images.

Authors:  Sohaib Asif; Kamran Amjad
Journal:  Interdiscip Sci       Date:  2022-06-29       Impact factor: 3.492

4.  Fast and Efficient Method for Optical Coherence Tomography Images Classification Using Deep Learning Approach.

Authors:  Rouhollah Kian Ara; Andrzej Matiolański; Andrzej Dziech; Remigiusz Baran; Paweł Domin; Adam Wieczorkiewicz
Journal:  Sensors (Basel)       Date:  2022-06-21       Impact factor: 3.847

5.  Student becomes teacher: training faster deep learning lightweight networks for automated identification of optical coherence tomography B-scans of interest using a student-teacher framework.

Authors:  Julia P Owen; Marian Blazes; Niranchana Manivannan; Gary C Lee; Sophia Yu; Mary K Durbin; Aditya Nair; Rishi P Singh; Katherine E Talcott; Alline G Melo; Tyler Greenlee; Eric R Chen; Thais F Conti; Cecilia S Lee; Aaron Y Lee
Journal:  Biomed Opt Express       Date:  2021-08-02       Impact factor: 3.732

6.  A multi-center study of prediction of macular hole status after vitrectomy and internal limiting membrane peeling by a deep learning model.

Authors:  Yijun Hu; Yu Xiao; Wuxiu Quan; Bin Zhang; Yuqing Wu; Qiaowei Wu; Baoyi Liu; Xiaomin Zeng; Ying Fang; Yu Hu; Songfu Feng; Ling Yuan; Tao Li; Hongmin Cai; Honghua Yu
Journal:  Ann Transl Med       Date:  2021-01

Review 7.  Diagnostic accuracy of deep learning in medical imaging: a systematic review and meta-analysis.

Authors:  Ravi Aggarwal; Viknesh Sounderajah; Guy Martin; Daniel S W Ting; Alan Karthikesalingam; Dominic King; Hutan Ashrafian; Ara Darzi
Journal:  NPJ Digit Med       Date:  2021-04-07

8.  Spatiotemporal absorption fluctuation imaging based on U-Net.

Authors:  Min Yi; Lin-Chang Wu; Qian-Yi Du; Cai-Zhong Guan; Ming-Di Liu; Xiao-Song Li; Hong-Lian Xiong; Hai-Shu Tan; Xue-Hua Wang; Jun-Ping Zhong; Ding-An Han; Ming-Yi Wang; Ya-Guang Zeng
Journal:  J Biomed Opt       Date:  2022-02       Impact factor: 3.758

Review 9.  Enhanced medical diagnosis for dOCTors: a perspective of optical coherence tomography.

Authors:  Rainer Leitgeb; Fabian Placzek; Elisabet Rank; Lisa Krainz; Richard Haindl; Qian Li; Mengyang Liu; Marco Andreana; Angelika Unterhuber; Tilman Schmoll; Wolfgang Drexler
Journal:  J Biomed Opt       Date:  2021-10       Impact factor: 3.758

10.  High spatially sensitive quantitative phase imaging assisted with deep neural network for classification of human spermatozoa under stressed condition.

Authors:  Ankit Butola; Daria Popova; Dilip K Prasad; Azeem Ahmad; Anowarul Habib; Jean Claude Tinguely; Purusotam Basnet; Ganesh Acharya; Paramasivam Senthilkumaran; Dalip Singh Mehta; Balpreet Singh Ahluwalia
Journal:  Sci Rep       Date:  2020-08-04       Impact factor: 4.379

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