Literature DB >> 31841336

Progress toward Eukaryotic Semisynthetic Organisms: Translation of Unnatural Codons.

Anne Xiao-Zhou Zhou1, Kai Sheng1, Aaron W Feldman1, Floyd E Romesberg1.   

Abstract

We have created a bacterial semisynthetic organism (SSO) that retains an unnatural base pair (UBP) in its DNA, transcribes it into mRNA and tRNA with cognate unnatural codons and anticodons, and after the tRNA is charged with a noncanonical amino acid synthesizes proteins containing the noncanonical amino acid. Here, we report the first progress toward the creation of eukaryotic SSOs. After demonstrating proof-of-concept with human HEK293 cells, we show that a variety of different unnatural codon-anticodon pairs can efficiently mediate the synthesis of unnatural proteins in CHO cells. Interestingly, we find that there are both similarities and significant differences between how the prokaryotic and eukaryotic ribosomes recognize the UBP, with the eukaryotic ribosome appearing more tolerant. The results represent the first progress toward eukaryotic SSOs and, in fact, suggest that such SSOs might be able to retain more unnatural information than their bacterial counterparts.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31841336      PMCID: PMC6946121          DOI: 10.1021/jacs.9b09080

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  25 in total

1.  An orthogonalized platform for genetic code expansion in both bacteria and eukaryotes.

Authors:  James S Italia; Partha Sarathi Addy; Chester J J Wrobel; Lisa A Crawford; Marc J Lajoie; Yunan Zheng; Abhishek Chatterjee
Journal:  Nat Chem Biol       Date:  2017-02-13       Impact factor: 15.040

2.  Reprograming the Replisome of a Semisynthetic Organism for the Expansion of the Genetic Alphabet.

Authors:  Michael P Ledbetter; Rebekah J Karadeema; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2018-01-08       Impact factor: 15.419

3.  Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome.

Authors:  Heinz Neumann; Kaihang Wang; Lloyd Davis; Maria Garcia-Alai; Jason W Chin
Journal:  Nature       Date:  2010-02-14       Impact factor: 49.962

Review 4.  Regulation by 3'-Untranslated Regions.

Authors:  Christine Mayr
Journal:  Annu Rev Genet       Date:  2017-08-30       Impact factor: 16.830

Review 5.  Functional 5' UTR mRNA structures in eukaryotic translation regulation and how to find them.

Authors:  Kathrin Leppek; Rhiju Das; Maria Barna
Journal:  Nat Rev Mol Cell Biol       Date:  2017-11-22       Impact factor: 94.444

6.  C-Terminally fused affinity Strep-tag II is removed by proteolysis from recombinant human erythropoietin expressed in transgenic tobacco plants.

Authors:  Farooqahmed S Kittur; Mallikarjun Lalgondar; Chiu-Yueh Hung; David C Sane; Jiahua Xie
Journal:  Plant Cell Rep       Date:  2014-12-14       Impact factor: 4.570

7.  Genetic encoding and labeling of aliphatic azides and alkynes in recombinant proteins via a pyrrolysyl-tRNA Synthetase/tRNA(CUA) pair and click chemistry.

Authors:  Duy P Nguyen; Hrvoje Lusic; Heinz Neumann; Prashant B Kapadnis; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2009-07-01       Impact factor: 15.419

8.  A versatile platform for single- and multiple-unnatural amino acid mutagenesis in Escherichia coli.

Authors:  Abhishek Chatterjee; Sophie B Sun; Jennifer L Furman; Han Xiao; Peter G Schultz
Journal:  Biochemistry       Date:  2013-02-27       Impact factor: 3.162

9.  An expanded genetic code with a functional quadruplet codon.

Authors:  J Christopher Anderson; Ning Wu; Stephen W Santoro; Vishva Lakshman; David S King; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-11       Impact factor: 11.205

10.  A semi-synthetic organism with an expanded genetic alphabet.

Authors:  Denis A Malyshev; Kirandeep Dhami; Thomas Lavergne; Tingjian Chen; Nan Dai; Jeremy M Foster; Ivan R Corrêa; Floyd E Romesberg
Journal:  Nature       Date:  2014-05-07       Impact factor: 49.962

View more
  4 in total

1.  Stronger together for in-cell translation: natural and unnatural base modified mRNA.

Authors:  Lisa Bornewasser; Christof Domnick; Stephanie Kath-Schorr
Journal:  Chem Sci       Date:  2022-03-03       Impact factor: 9.969

Review 2.  Genetic Code Engineering by Natural and Unnatural Base Pair Systems for the Site-Specific Incorporation of Non-Standard Amino Acids Into Proteins.

Authors:  Michiko Kimoto; Ichiro Hirao
Journal:  Front Mol Biosci       Date:  2022-05-24

3.  Site-specific covalent labeling of large RNAs with nanoparticles empowered by expanded genetic alphabet transcription.

Authors:  Yan Wang; Yaoyi Chen; Yanping Hu; Xianyang Fang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

Review 4.  Undefining life's biochemistry: implications for abiogenesis.

Authors:  Stephen Freeland
Journal:  J R Soc Interface       Date:  2022-02-23       Impact factor: 4.118

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.