| Literature DB >> 31835027 |
Jennifer E Rood1, Tim Stuart2, Shila Ghazanfar3, Tommaso Biancalani1, Eyal Fisher3, Andrew Butler4, Anna Hupalowska1, Leslie Gaffney1, William Mauck4, Gökçen Eraslan1, John C Marioni5, Aviv Regev6, Rahul Satija7.
Abstract
Understanding the genetic and molecular drivers of phenotypic heterogeneity across individuals is central to biology. As new technologies enable fine-grained and spatially resolved molecular profiling, we need new computational approaches to integrate data from the same organ across different individuals into a consistent reference and to construct maps of molecular and cellular organization at histological and anatomical scales. Here, we review previous efforts and discuss challenges involved in establishing such a common coordinate framework, the underlying map of tissues and organs. We focus on strategies to handle anatomical variation across individuals and highlight the need for new technologies and analytical methods spanning multiple hierarchical scales of spatial resolution.Entities:
Mesh:
Year: 2019 PMID: 31835027 PMCID: PMC6934046 DOI: 10.1016/j.cell.2019.11.019
Source DB: PubMed Journal: Cell ISSN: 0092-8674 Impact factor: 41.582