Literature DB >> 31833809

Conception, Implementation, and Integration of Heterogenous Information Technology Infrastructures in the Qatar Biobank.

Eleni Fthenou1, Ameena Al Emadi1, Fahad F Mahal1, Leo T Chettupuzhakaran1, Asma Al Thani1,2,3,4, Nahla Afifi1.   

Abstract

The overall goal of the Qatar Biobank (QBB) is to collect, manage, and distribute high-quality human biospecimens with appropriate clinical and/or research annotation and associated phenotypic data, aiming to be an important and essential resource of medical research and evidence-based health care system policies in Qatar. To manage and collect large volumes of data, the QBB has been investing in a number of information management solutions, trying to avoid inflexibility of traditional systems and accommodate changes in data sources and workflows. This article aims to present the information technology solutions of QBB based on a free, open-source software solution, considered a reliable alternative to commercial solutions. After evaluating the free, open-source software solutions available for biobanks, Onyx from ObiBa was utilized to develop custom components to interface various clinical devices, LIMS and Picture Archiving and Communication System, which has varying integration capabilities. This is a showcase for biobanks to carefully evaluate and select hardware and software to automate their operations providing the functions required for business continuity.

Entities:  

Keywords:  IT infrastructure; Qatar Biobank; data integration

Mesh:

Year:  2019        PMID: 31833809     DOI: 10.1089/bio.2019.0067

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  3 in total

1.  Human leukocyte antigen class II gene diversity tunes antibody repertoires to common pathogens.

Authors:  Taushif Khan; Mahbuba Rahman; Ikhlak Ahmed; Fatima Al Ali; Puthen Veettil Jithesh; Nico Marr
Journal:  Front Immunol       Date:  2022-08-08       Impact factor: 8.786

2.  Standard operating procedures for biobank in oncology.

Authors:  Giuseppina Bonizzi; Lorenzo Zattoni; Maria Capra; Cristina Cassi; Giulio Taliento; Mariia Ivanova; Elena Guerini-Rocco; Marzia Fumagalli; Massimo Monturano; Adriana Albini; Giuseppe Viale; Roberto Orecchia; Nicola Fusco
Journal:  Front Mol Biosci       Date:  2022-08-26

3.  The QChip1 knowledgebase and microarray for precision medicine in Qatar.

Authors:  Juan L Rodriguez-Flores; Radja Messai-Badji; Amal Robay; Asmaa Althani; Ronald G Crystal; Ramzi Temanni; Najeeb Syed; Monika Markovic; Eiman Al-Khayat; Fatima Qafoud; Zafar Nawaz; Ramin Badii; Yasser Al-Sarraj; Hamdi Mbarek; Wadha Al-Muftah; Muhammad Alvi; Mahboubeh R Rostami; Juan Carlos Martinez Cruzado; Jason G Mezey; Alya Al Shakaki; Joel A Malek; Matthew B Greenblatt; Khalid A Fakhro; Khaled Machaca; Ajayeb Al-Nabet; Nahla Afifi; Andrew Brooks; Said I Ismail
Journal:  NPJ Genom Med       Date:  2022-01-19       Impact factor: 6.083

  3 in total

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