Literature DB >> 31822368

From Loops to Looks: Transcription Factors and Chromatin Organization Shaping Terminal B Cell Differentiation.

Alba Azagra1, Ester Marina-Zárate2, Almudena R Ramiro2, Biola M Javierre3, Maribel Parra4.   

Abstract

B lymphopoiesis is tightly regulated at the level of gene transcription. In recent years, investigators have shed light on the transcription factor networks and the epigenetic machinery involved at all differentiation steps of mammalian B cell development. During terminal differentiation, B cells undergo dramatic changes in gene transcriptional programs to generate germinal center B cells, plasma cells and memory B cells. Recent evidence indicates that mature B cell formation involves an essential contribution from 3D chromatin conformations through its interplay with transcription factors and epigenetic machinery. Here, we provide an up-to-date overview of the coordination between transcription factors, epigenetic changes, and chromatin architecture during terminal B cell differentiation, focusing on recent discoveries and technical advances for studying 3D chromatin structures.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  3D chromatin architecture; B lymphocyte differentiation; DNA loops; chromosome conformation capture (3C); transcription factors

Mesh:

Substances:

Year:  2019        PMID: 31822368     DOI: 10.1016/j.it.2019.11.006

Source DB:  PubMed          Journal:  Trends Immunol        ISSN: 1471-4906            Impact factor:   16.687


  11 in total

Review 1.  3D chromosomal architecture in germinal center B cells and its alterations in lymphomagenesis.

Authors:  Antonin Papin; Ethel Cesarman; Ari Melnick
Journal:  Curr Opin Genet Dev       Date:  2022-05-09       Impact factor: 4.665

2.  The role of HIRA-dependent H3.3 deposition and its modifications in the somatic hypermutation of immunoglobulin variable regions.

Authors:  Guojun Yu; Yongwei Zhang; Varun Gupta; Jinghang Zhang; Thomas MacCarthy; Zhi Duan; Matthew D Scharff
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-14       Impact factor: 12.779

Review 3.  MYC's Fine Line Between B Cell Development and Malignancy.

Authors:  Oriol de Barrios; Ainara Meler; Maribel Parra
Journal:  Cells       Date:  2020-02-24       Impact factor: 6.600

4.  Pre-mitotic genome re-organisation bookends the B cell differentiation process.

Authors:  Wing Fuk Chan; Hannah D Coughlan; Gordon K Smyth; Timothy M Johanson; Rhys S Allan; Jie H S Zhou; Christine R Keenan; Naiara G Bediaga; Philip D Hodgkin
Journal:  Nat Commun       Date:  2021-02-26       Impact factor: 14.919

Review 5.  Nuclear organization and regulation of the differentiated state.

Authors:  Eliya Bitman-Lotan; Amir Orian
Journal:  Cell Mol Life Sci       Date:  2021-01-28       Impact factor: 9.261

Review 6.  Core Fucosylation Regulates the Function of Pre-BCR, BCR and IgG in Humoral Immunity.

Authors:  Yuhan Sun; Xueying Li; Tiantong Wang; Wenzhe Li
Journal:  Front Immunol       Date:  2022-03-25       Impact factor: 7.561

Review 7.  B Cells and Microbiota in Autoimmunity.

Authors:  María Botía-Sánchez; Marta E Alarcón-Riquelme; Georgina Galicia
Journal:  Int J Mol Sci       Date:  2021-05-03       Impact factor: 5.923

Review 8.  Deciphering the Complexity of 3D Chromatin Organization Driving Lymphopoiesis and Lymphoid Malignancies.

Authors:  Laurianne Scourzic; Eralda Salataj; Effie Apostolou
Journal:  Front Immunol       Date:  2021-05-14       Impact factor: 7.561

9.  Multiscale Modeling of Germinal Center Recapitulates the Temporal Transition From Memory B Cells to Plasma Cells Differentiation as Regulated by Antigen Affinity-Based Tfh Cell Help.

Authors:  Elena Merino Tejero; Danial Lashgari; Rodrigo García-Valiente; Xuefeng Gao; Fabien Crauste; Philippe A Robert; Michael Meyer-Hermann; María Rodríguez Martínez; S Marieke van Ham; Jeroen E J Guikema; Huub Hoefsloot; Antoine H C van Kampen
Journal:  Front Immunol       Date:  2021-02-05       Impact factor: 7.561

Review 10.  Epigenetic Control of Infant B Cell Precursor Acute Lymphoblastic Leukemia.

Authors:  Oriol de Barrios; Maribel Parra
Journal:  Int J Mol Sci       Date:  2021-03-18       Impact factor: 5.923

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